EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0001986 (Gene tree)
Gene ID: 48782
Gene Symbol: Mtr4
Alias: -
Full Name: Mtr4 helicase
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 3638 bases
Position: chr2L:15752263-15755900
Accession: FBgn0001986
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0080319	rRNA_proc-arch	PF13234.6	5.2e-80	1	1
FBpp0080319	DEAD	PF00270.29	1.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0080760	-	3585	-	FBpp0080319	1055 (aa)	-	Q9Y134

Gene Model

Click here to download FBgn0001986's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0001986's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0001986	Mtr4	86	34.833	FBgn0039117	tst	79	35.036

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0001986	Mtr4	92	65.886	ENSG00000039123	MTREX	85	77.049	Homo_sapiens
FBgn0001986	Mtr4	97	62.646	ENSAPOG00000007814	mtrex	98	62.840	Acanthochromis_polyacanthus
FBgn0001986	Mtr4	99	62.712	ENSAMEG00000013856	MTREX	99	62.524	Ailuropoda_melanoleuca
FBgn0001986	Mtr4	89	66.914	ENSACIG00000015117	mtrex	94	66.914	Amphilophus_citrinellus
FBgn0001986	Mtr4	97	62.597	ENSAOCG00000011884	mtrex	98	63.024	Amphiprion_ocellaris
FBgn0001986	Mtr4	97	62.694	ENSAPEG00000019384	mtrex	98	63.024	Amphiprion_percula
FBgn0001986	Mtr4	96	62.500	ENSATEG00000015117	mtrex	98	62.500	Anabas_testudineus
FBgn0001986	Mtr4	93	64.969	ENSAPLG00000009694	MTREX	96	65.973	Anas_platyrhynchos
FBgn0001986	Mtr4	98	63.259	ENSACAG00000015200	MTREX	88	66.841	Anolis_carolinensis
FBgn0001986	Mtr4	94	64.606	ENSANAG00000023095	MTREX	94	66.701	Aotus_nancymaae
FBgn0001986	Mtr4	96	62.293	ENSACLG00000001921	mtrex	98	62.732	Astatotilapia_calliptera
FBgn0001986	Mtr4	95	60.555	ENSAMXG00000018751	mtrex	98	60.753	Astyanax_mexicanus
FBgn0001986	Mtr4	93	65.361	ENSBTAG00000010518	MTREX	99	62.595	Bos_taurus
FBgn0001986	Mtr4	90	51.572	WBGene00012342	mtr-4	100	48.448	Caenorhabditis_elegans
FBgn0001986	Mtr4	94	64.606	ENSCJAG00000001773	MTREX	93	66.701	Callithrix_jacchus
FBgn0001986	Mtr4	93	65.060	ENSCAFG00000006818	MTREX	99	62.394	Canis_familiaris
FBgn0001986	Mtr4	93	65.060	ENSCAFG00020024352	MTREX	99	62.394	Canis_lupus_dingo
FBgn0001986	Mtr4	93	65.261	ENSCHIG00000024413	MTREX	99	62.287	Capra_hircus
FBgn0001986	Mtr4	94	62.192	ENSTSYG00000007389	MTREX	99	62.416	Carlito_syrichta
FBgn0001986	Mtr4	84	54.545	ENSCAPG00000008696	MTREX	92	55.581	Cavia_aperea
FBgn0001986	Mtr4	99	62.747	ENSCPOG00000009797	MTREX	99	62.571	Cavia_porcellus
FBgn0001986	Mtr4	92	65.988	ENSCCAG00000014177	MTREX	99	62.394	Cebus_capucinus
FBgn0001986	Mtr4	92	65.988	ENSCATG00000042153	MTREX	92	66.701	Cercocebus_atys
FBgn0001986	Mtr4	97	64.016	ENSCLAG00000006622	MTREX	99	62.994	Chinchilla_lanigera
FBgn0001986	Mtr4	92	64.069	ENSCSAG00000016445	MTREX	92	64.736	Chlorocebus_sabaeus
FBgn0001986	Mtr4	53	88.889	ENSCHOG00000010936	-	55	88.889	Choloepus_hoffmanni
FBgn0001986	Mtr4	91	66.424	ENSCPBG00000026551	MTREX	93	63.645	Chrysemys_picta_bellii
FBgn0001986	Mtr4	89	62.354	ENSCING00000003239	-	91	62.354	Ciona_intestinalis
FBgn0001986	Mtr4	95	59.095	ENSCSAVG00000009304	-	100	61.123	Ciona_savignyi
FBgn0001986	Mtr4	98	63.619	ENSCANG00000035770	MTREX	99	63.443	Colobus_angolensis_palliatus
FBgn0001986	Mtr4	92	66.191	ENSCGRG00001024680	Mtrex	99	62.819	Cricetulus_griseus_chok1gshd
FBgn0001986	Mtr4	92	66.191	ENSCGRG00000000307	Mtrex	99	62.819	Cricetulus_griseus_crigri
FBgn0001986	Mtr4	96	62.732	ENSCSEG00000018621	mtrex	96	62.709	Cynoglossus_semilaevis
FBgn0001986	Mtr4	94	63.762	ENSCVAG00000004556	mtrex	98	63.168	Cyprinodon_variegatus
FBgn0001986	Mtr4	99	62.170	ENSDARG00000013457	mtrex	99	62.075	Danio_rerio
FBgn0001986	Mtr4	96	63.601	ENSDNOG00000015375	MTREX	91	66.701	Dasypus_novemcinctus
FBgn0001986	Mtr4	93	65.292	ENSDORG00000006782	Mtrex	92	66.701	Dipodomys_ordii
FBgn0001986	Mtr4	78	59.868	ENSETEG00000000727	MTREX	78	59.868	Echinops_telfairi
FBgn0001986	Mtr4	96	61.029	ENSEBUG00000012869	mtrex	98	60.930	Eptatretus_burgeri
FBgn0001986	Mtr4	99	62.559	ENSEASG00005013270	MTREX	99	62.488	Equus_asinus_asinus
FBgn0001986	Mtr4	99	62.465	ENSECAG00000023723	MTREX	99	69.668	Equus_caballus
FBgn0001986	Mtr4	91	58.653	ENSEEUG00000000527	MTREX	99	55.524	Erinaceus_europaeus
FBgn0001986	Mtr4	95	63.473	ENSELUG00000004898	mtrex	99	66.737	Esox_lucius
FBgn0001986	Mtr4	99	62.712	ENSFCAG00000010575	MTREX	99	62.642	Felis_catus
FBgn0001986	Mtr4	94	64.484	ENSFALG00000010850	MTREX	99	63.391	Ficedula_albicollis
FBgn0001986	Mtr4	99	62.311	ENSFDAG00000011199	MTREX	99	62.216	Fukomys_damarensis
FBgn0001986	Mtr4	96	62.512	ENSFHEG00000023014	mtrex	91	66.702	Fundulus_heteroclitus
FBgn0001986	Mtr4	89	65.268	ENSGMOG00000014702	mtrex	95	65.687	Gadus_morhua
FBgn0001986	Mtr4	99	62.464	ENSGALG00000014709	MTREX	80	66.841	Gallus_gallus
FBgn0001986	Mtr4	99	62.040	ENSGAFG00000012425	mtrex	95	66.667	Gambusia_affinis
FBgn0001986	Mtr4	87	66.056	ENSGACG00000016260	mtrex	96	66.630	Gasterosteus_aculeatus
FBgn0001986	Mtr4	98	63.188	ENSGAGG00000020036	MTREX	99	63.575	Gopherus_agassizii
FBgn0001986	Mtr4	92	65.988	ENSGGOG00000001867	MTREX	92	66.701	Gorilla_gorilla
FBgn0001986	Mtr4	96	62.293	ENSHBUG00000006229	mtrex	98	62.732	Haplochromis_burtoni
FBgn0001986	Mtr4	99	62.689	ENSHGLG00000019445	SKIV2L2	99	62.500	Heterocephalus_glaber_female
FBgn0001986	Mtr4	99	62.689	ENSHGLG00100011833	SKIV2L2	99	62.500	Heterocephalus_glaber_male
FBgn0001986	Mtr4	89	64.213	ENSHCOG00000019995	mtrex	99	64.213	Hippocampus_comes
FBgn0001986	Mtr4	99	61.095	ENSIPUG00000024348	skiv2l2	99	62.804	Ictalurus_punctatus
FBgn0001986	Mtr4	97	63.875	ENSSTOG00000010802	MTREX	99	62.287	Ictidomys_tridecemlineatus
FBgn0001986	Mtr4	99	59.585	ENSJJAG00000020975	Mtrex	99	59.585	Jaculus_jaculus
FBgn0001986	Mtr4	97	62.718	ENSKMAG00000012642	mtrex	93	66.773	Kryptolebias_marmoratus
FBgn0001986	Mtr4	99	61.226	ENSLBEG00000019367	mtrex	99	64.212	Labrus_bergylta
FBgn0001986	Mtr4	99	63.422	ENSLACG00000009075	MTREX	99	63.138	Latimeria_chalumnae
FBgn0001986	Mtr4	99	62.157	ENSLOCG00000010186	mtrex	92	66.180	Lepisosteus_oculatus
FBgn0001986	Mtr4	92	64.053	ENSLAFG00000010497	MTREX	99	61.680	Loxodonta_africana
FBgn0001986	Mtr4	92	65.988	ENSMFAG00000031610	MTREX	92	66.701	Macaca_fascicularis
FBgn0001986	Mtr4	92	65.988	ENSMMUG00000010379	MTREX	92	66.701	Macaca_mulatta
FBgn0001986	Mtr4	92	65.988	ENSMNEG00000032746	MTREX	92	66.701	Macaca_nemestrina
FBgn0001986	Mtr4	92	65.988	ENSMLEG00000041051	MTREX	92	66.701	Mandrillus_leucophaeus
FBgn0001986	Mtr4	95	63.448	ENSMAMG00000016753	mtrex	94	66.737	Mastacembelus_armatus
FBgn0001986	Mtr4	96	62.293	ENSMZEG00005000414	mtrex	98	62.732	Maylandia_zebra
FBgn0001986	Mtr4	89	50.318	ENSMGAG00000003980	MTREX	95	50.318	Meleagris_gallopavo
FBgn0001986	Mtr4	92	66.395	ENSMAUG00000010727	Mtrex	99	63.009	Mesocricetus_auratus
FBgn0001986	Mtr4	92	65.988	ENSMICG00000012779	MTREX	99	62.488	Microcebus_murinus
FBgn0001986	Mtr4	94	65.507	ENSMOCG00000019886	Mtrex	99	62.677	Microtus_ochrogaster
FBgn0001986	Mtr4	89	65.753	ENSMMOG00000002476	mtrex	94	65.753	Mola_mola
FBgn0001986	Mtr4	99	62.085	ENSMODG00000019494	MTREX	99	61.991	Monodelphis_domestica
FBgn0001986	Mtr4	97	55.707	ENSMALG00000002917	mtrex	97	62.967	Monopterus_albus
FBgn0001986	Mtr4	93	65.261	MGP_CAROLIEiJ_G0018896	Mtrex	92	66.597	Mus_caroli
FBgn0001986	Mtr4	92	65.886	ENSMUSG00000016018	Mtrex	99	62.405	Mus_musculus
FBgn0001986	Mtr4	92	65.886	MGP_PahariEiJ_G0015967	Mtrex	99	62.571	Mus_pahari
FBgn0001986	Mtr4	92	65.886	MGP_SPRETEiJ_G0019775	Mtrex	99	62.405	Mus_spretus
FBgn0001986	Mtr4	99	62.677	ENSMPUG00000007619	MTREX	99	62.488	Mustela_putorius_furo
FBgn0001986	Mtr4	99	62.618	ENSMLUG00000001152	MTREX	99	62.323	Myotis_lucifugus
FBgn0001986	Mtr4	92	65.886	ENSNGAG00000011938	Mtrex	99	62.111	Nannospalax_galili
FBgn0001986	Mtr4	96	62.196	ENSNBRG00000011293	mtrex	98	62.634	Neolamprologus_brichardi
FBgn0001986	Mtr4	92	62.703	ENSNLEG00000001494	MTREX	92	63.344	Nomascus_leucogenys
FBgn0001986	Mtr4	66	86.275	ENSMEUG00000006496	-	67	86.275	Notamacropus_eugenii
FBgn0001986	Mtr4	92	54.184	ENSOPRG00000008009	MTREX	92	54.631	Ochotona_princeps
FBgn0001986	Mtr4	97	63.698	ENSODEG00000017234	MTREX	99	62.264	Octodon_degus
FBgn0001986	Mtr4	96	62.367	ENSONIG00000007587	mtrex	91	66.878	Oreochromis_niloticus
FBgn0001986	Mtr4	99	62.784	ENSOCUG00000004463	MTREX	99	62.595	Oryctolagus_cuniculus
FBgn0001986	Mtr4	99	61.878	ENSORLG00000005443	mtrex	99	61.698	Oryzias_latipes
FBgn0001986	Mtr4	99	61.654	ENSORLG00020006329	mtrex	99	61.575	Oryzias_latipes_hni
FBgn0001986	Mtr4	99	61.748	ENSORLG00015012924	mtrex	99	61.668	Oryzias_latipes_hsok
FBgn0001986	Mtr4	99	61.445	ENSOMEG00000008825	mtrex	99	61.257	Oryzias_melastigma
FBgn0001986	Mtr4	93	65.392	ENSOGAG00000002886	MTREX	92	66.805	Otolemur_garnettii
FBgn0001986	Mtr4	93	65.065	ENSOARG00000007764	MTREX	99	62.111	Ovis_aries
FBgn0001986	Mtr4	92	65.988	ENSPPAG00000039291	MTREX	92	66.701	Pan_paniscus
FBgn0001986	Mtr4	99	62.712	ENSPPRG00000019701	MTREX	99	62.642	Panthera_pardus
FBgn0001986	Mtr4	99	61.394	ENSPTIG00000009313	MTREX	99	61.321	Panthera_tigris_altaica
FBgn0001986	Mtr4	92	65.988	ENSPTRG00000016878	MTREX	92	66.701	Pan_troglodytes
FBgn0001986	Mtr4	92	66.090	ENSPANG00000009697	MTREX	92	66.805	Papio_anubis
FBgn0001986	Mtr4	98	62.476	ENSPKIG00000020833	mtrex	98	64.845	Paramormyrops_kingsleyae
FBgn0001986	Mtr4	91	66.149	ENSPSIG00000012150	MTREX	99	63.214	Pelodiscus_sinensis
FBgn0001986	Mtr4	93	63.026	ENSPMGG00000002582	mtrex	96	64.433	Periophthalmus_magnuspinnatus
FBgn0001986	Mtr4	95	56.064	ENSPMAG00000009668	mtrex	99	56.064	Petromyzon_marinus
FBgn0001986	Mtr4	90	67.018	ENSPCIG00000024730	MTREX	99	67.018	Phascolarctos_cinereus
FBgn0001986	Mtr4	74	64.141	ENSPFOG00000003141	mtrex	99	64.549	Poecilia_formosa
FBgn0001986	Mtr4	97	62.633	ENSPLAG00000021311	mtrex	98	62.829	Poecilia_latipinna
FBgn0001986	Mtr4	89	66.066	ENSPMEG00000010597	mtrex	97	66.454	Poecilia_mexicana
FBgn0001986	Mtr4	97	62.536	ENSPREG00000003089	mtrex	98	62.732	Poecilia_reticulata
FBgn0001986	Mtr4	91	65.699	ENSPPYG00000015469	MTREX	90	66.419	Pongo_abelii
FBgn0001986	Mtr4	76	62.689	ENSPCAG00000013120	MTREX	77	62.689	Procavia_capensis
FBgn0001986	Mtr4	85	60.841	ENSPCOG00000018092	MTREX	92	60.643	Propithecus_coquereli
FBgn0001986	Mtr4	93	65.261	ENSPVAG00000002445	MTREX	99	62.382	Pteropus_vampyrus
FBgn0001986	Mtr4	96	62.391	ENSPNYG00000006164	mtrex	98	62.829	Pundamilia_nyererei
FBgn0001986	Mtr4	99	62.323	ENSPNAG00000008794	mtrex	98	63.417	Pygocentrus_nattereri
FBgn0001986	Mtr4	91	65.699	ENSRNOG00000010125	Mtrex	88	66.419	Rattus_norvegicus
FBgn0001986	Mtr4	94	63.872	ENSRBIG00000034930	MTREX	99	62.186	Rhinopithecus_bieti
FBgn0001986	Mtr4	94	65.170	ENSRROG00000039895	MTREX	99	63.443	Rhinopithecus_roxellana
FBgn0001986	Mtr4	88	52.510	YJL050W	MTR4	100	48.535	Saccharomyces_cerevisiae
FBgn0001986	Mtr4	94	64.606	ENSSBOG00000026693	MTREX	94	66.701	Saimiri_boliviensis_boliviensis
FBgn0001986	Mtr4	91	66.389	ENSSHAG00000004600	MTREX	96	66.389	Sarcophilus_harrisii
FBgn0001986	Mtr4	95	62.818	ENSSFOG00015014355	skiv2l2	93	65.625	Scleropages_formosus
FBgn0001986	Mtr4	96	62.573	ENSSMAG00000007572	mtrex	98	62.671	Scophthalmus_maximus
FBgn0001986	Mtr4	96	63.024	ENSSDUG00000023789	mtrex	98	63.122	Seriola_dumerili
FBgn0001986	Mtr4	96	63.024	ENSSLDG00000006301	mtrex	98	63.122	Seriola_lalandi_dorsalis
FBgn0001986	Mtr4	90	66.597	ENSSARG00000008387	MTREX	91	66.597	Sorex_araneus
FBgn0001986	Mtr4	82	68.797	ENSSPUG00000007071	MTREX	95	60.697	Sphenodon_punctatus
FBgn0001986	Mtr4	89	65.708	ENSSPAG00000011319	mtrex	92	66.241	Stegastes_partitus
FBgn0001986	Mtr4	93	65.261	ENSSSCG00000016911	MTREX	99	62.453	Sus_scrofa
FBgn0001986	Mtr4	96	64.055	ENSTGUG00000002480	MTREX	98	63.285	Taeniopygia_guttata
FBgn0001986	Mtr4	92	63.265	ENSTRUG00000014571	mtrex	93	65.429	Takifugu_rubripes
FBgn0001986	Mtr4	86	57.346	ENSTBEG00000007769	MTREX	87	57.346	Tupaia_belangeri
FBgn0001986	Mtr4	93	65.060	ENSTTRG00000008678	MTREX	99	62.405	Tursiops_truncatus
FBgn0001986	Mtr4	99	62.771	ENSUAMG00000023061	MTREX	99	62.476	Ursus_americanus
FBgn0001986	Mtr4	99	62.371	ENSUMAG00000009373	MTREX	99	67.620	Ursus_maritimus
FBgn0001986	Mtr4	99	56.833	ENSVPAG00000011174	MTREX	99	56.726	Vicugna_pacos
FBgn0001986	Mtr4	93	65.161	ENSVVUG00000021337	MTREX	99	62.488	Vulpes_vulpes
FBgn0001986	Mtr4	99	63.033	ENSXETG00000032798	MTREX	99	63.033	Xenopus_tropicalis
FBgn0001986	Mtr4	97	62.888	ENSXMAG00000004799	mtrex	95	67.093	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	18981222.	IC	Process
GO:0000460	maturation of 5.8S rRNA	21873635.	IBA	Process
GO:0003723	RNA binding	-	IEA	Function
GO:0004004	ATP-dependent RNA helicase activity	21873635.	IBA	Function
GO:0004004	ATP-dependent RNA helicase activity	10908586.	ISS	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0006401	RNA catabolic process	21873635.	IBA	Process
GO:0051607	defense response to virus	27474443.	IMP	Process
GO:0071013	catalytic step 2 spliceosome	18981222.	HDA	Component