EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0001995 (Gene tree)
Gene ID: 49425
Gene Symbol: mRpL4
Alias: -
Full Name: mitochondrial ribosomal protein L4
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 1074 bases
Position: chr2L:16328059-16329132
Accession: FBgn0001995
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0080401	Ribosomal_L4	PF00573.22	2e-49	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0080843	-	1012	-	FBpp0080401	296 (aa)	-	Q9V3D0

Gene Model

Click here to download FBgn0001995's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0001995's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0001995	mRpL4	73	57.143	ENSG00000105364	MRPL4	99	64.407	Homo_sapiens
FBgn0001995	mRpL4	86	50.000	ENSAPOG00000010156	mrpl4	83	50.000	Acanthochromis_polyacanthus
FBgn0001995	mRpL4	88	50.562	ENSAMEG00000011808	MRPL4	90	50.562	Ailuropoda_melanoleuca
FBgn0001995	mRpL4	73	53.704	ENSACIG00000011523	mrpl4	86	63.964	Amphilophus_citrinellus
FBgn0001995	mRpL4	95	43.607	ENSAOCG00000018507	mrpl4	95	43.607	Amphiprion_ocellaris
FBgn0001995	mRpL4	86	49.606	ENSAPEG00000006208	mrpl4	83	49.606	Amphiprion_percula
FBgn0001995	mRpL4	86	50.394	ENSATEG00000021694	mrpl4	83	50.394	Anabas_testudineus
FBgn0001995	mRpL4	74	54.795	ENSACAG00000008232	MRPL4	74	54.795	Anolis_carolinensis
FBgn0001995	mRpL4	72	57.009	ENSANAG00000025428	MRPL4	75	57.009	Aotus_nancymaae
FBgn0001995	mRpL4	82	52.479	ENSACLG00000017038	mrpl4	79	52.479	Astatotilapia_calliptera
FBgn0001995	mRpL4	74	51.142	ENSAMXG00000002236	mrpl4	73	51.142	Astyanax_mexicanus
FBgn0001995	mRpL4	76	45.374	WBGene00020717	mrpl-4	76	45.374	Caenorhabditis_elegans
FBgn0001995	mRpL4	72	56.542	ENSCJAG00000005764	MRPL4	73	56.542	Callithrix_jacchus
FBgn0001995	mRpL4	73	54.378	ENSCAFG00000017881	MRPL4	74	54.378	Canis_familiaris
FBgn0001995	mRpL4	73	54.378	ENSCAFG00020024405	MRPL4	72	54.378	Canis_lupus_dingo
FBgn0001995	mRpL4	73	55.300	ENSCHIG00000000516	MRPL4	74	55.300	Capra_hircus
FBgn0001995	mRpL4	73	56.221	ENSTSYG00000034805	MRPL4	74	56.221	Carlito_syrichta
FBgn0001995	mRpL4	63	54.545	ENSCAPG00000000036	MRPL4	93	54.545	Cavia_aperea
FBgn0001995	mRpL4	73	55.760	ENSCPOG00000006506	MRPL4	73	55.760	Cavia_porcellus
FBgn0001995	mRpL4	92	50.000	ENSCLAG00000004552	MRPL4	94	50.000	Chinchilla_lanigera
FBgn0001995	mRpL4	73	56.221	ENSCSAG00000007362	MRPL4	73	56.221	Chlorocebus_sabaeus
FBgn0001995	mRpL4	76	54.667	ENSCPBG00000005432	MRPL4	90	54.667	Chrysemys_picta_bellii
FBgn0001995	mRpL4	80	37.238	ENSCING00000003144	-	76	37.238	Ciona_intestinalis
FBgn0001995	mRpL4	90	34.409	ENSCSAVG00000007005	-	90	34.409	Ciona_savignyi
FBgn0001995	mRpL4	73	55.300	ENSCGRG00001013642	Mrpl4	74	55.300	Cricetulus_griseus_chok1gshd
FBgn0001995	mRpL4	73	55.300	ENSCGRG00000012922	Mrpl4	74	55.300	Cricetulus_griseus_crigri
FBgn0001995	mRpL4	73	56.481	ENSCSEG00000020580	mrpl4	72	56.481	Cynoglossus_semilaevis
FBgn0001995	mRpL4	73	54.167	ENSDARG00000058824	mrpl4	72	54.167	Danio_rerio
FBgn0001995	mRpL4	73	52.535	ENSDNOG00000044263	-	92	47.778	Dasypus_novemcinctus
FBgn0001995	mRpL4	73	50.000	ENSDNOG00000010139	-	75	50.000	Dasypus_novemcinctus
FBgn0001995	mRpL4	73	54.839	ENSDORG00000003723	Mrpl4	85	54.839	Dipodomys_ordii
FBgn0001995	mRpL4	76	55.507	ENSETEG00000002009	MRPL4	86	52.549	Echinops_telfairi
FBgn0001995	mRpL4	76	53.982	ENSEBUG00000016597	mrpl4	73	53.982	Eptatretus_burgeri
FBgn0001995	mRpL4	74	55.455	ENSEASG00005010556	MRPL4	73	55.455	Equus_asinus_asinus
FBgn0001995	mRpL4	74	55.455	ENSECAG00000017013	MRPL4	73	55.455	Equus_caballus
FBgn0001995	mRpL4	74	37.727	ENSEEUG00000012011	MRPL4	73	37.727	Erinaceus_europaeus
FBgn0001995	mRpL4	77	55.263	ENSELUG00000010463	mrpl4	86	50.758	Esox_lucius
FBgn0001995	mRpL4	65	52.062	ENSFCAG00000043071	MRPL4	74	52.062	Felis_catus
FBgn0001995	mRpL4	69	55.122	ENSFDAG00000001936	MRPL4	91	55.122	Fukomys_damarensis
FBgn0001995	mRpL4	86	49.020	ENSFHEG00000003126	mrpl4	84	49.020	Fundulus_heteroclitus
FBgn0001995	mRpL4	72	53.271	ENSGMOG00000007229	mrpl4	75	53.271	Gadus_morhua
FBgn0001995	mRpL4	82	50.413	ENSGAFG00000018136	mrpl4	80	50.413	Gambusia_affinis
FBgn0001995	mRpL4	74	55.708	ENSGACG00000019808	mrpl4	80	52.893	Gasterosteus_aculeatus
FBgn0001995	mRpL4	86	51.765	ENSGAGG00000018010	MRPL4	84	51.765	Gopherus_agassizii
FBgn0001995	mRpL4	84	51.793	ENSGGOG00000036529	-	79	51.793	Gorilla_gorilla
FBgn0001995	mRpL4	82	52.479	ENSHBUG00000006332	mrpl4	79	52.479	Haplochromis_burtoni
FBgn0001995	mRpL4	82	52.653	ENSHGLG00000007839	MRPL4	83	52.653	Heterocephalus_glaber_female
FBgn0001995	mRpL4	88	50.000	ENSHGLG00100002720	MRPL4	93	50.000	Heterocephalus_glaber_male
FBgn0001995	mRpL4	75	50.450	ENSHCOG00000002016	mrpl4	81	48.760	Hippocampus_comes
FBgn0001995	mRpL4	73	52.778	ENSIPUG00000011705	mrpl4	69	52.778	Ictalurus_punctatus
FBgn0001995	mRpL4	58	59.538	ENSSTOG00000030121	MRPL4	87	59.538	Ictidomys_tridecemlineatus
FBgn0001995	mRpL4	92	47.670	ENSJJAG00000010573	Mrpl4	94	47.670	Jaculus_jaculus
FBgn0001995	mRpL4	94	48.070	ENSKMAG00000012769	mrpl4	93	48.070	Kryptolebias_marmoratus
FBgn0001995	mRpL4	73	53.953	ENSLBEG00000000848	mrpl4	71	54.206	Labrus_bergylta
FBgn0001995	mRpL4	74	57.078	ENSLACG00000009255	MRPL4	67	57.078	Latimeria_chalumnae
FBgn0001995	mRpL4	72	54.460	ENSLOCG00000016632	mrpl4	71	54.460	Lepisosteus_oculatus
FBgn0001995	mRpL4	85	52.362	ENSLAFG00000015366	MRPL4	84	52.362	Loxodonta_africana
FBgn0001995	mRpL4	73	55.760	ENSMFAG00000003526	MRPL4	70	55.760	Macaca_fascicularis
FBgn0001995	mRpL4	73	55.760	ENSMMUG00000001219	MRPL4	73	55.760	Macaca_mulatta
FBgn0001995	mRpL4	95	48.264	ENSMNEG00000040746	MRPL4	95	48.264	Macaca_nemestrina
FBgn0001995	mRpL4	73	45.161	ENSMLEG00000041712	MRPL4	72	45.161	Mandrillus_leucophaeus
FBgn0001995	mRpL4	73	53.704	ENSMAMG00000001736	mrpl4	80	50.413	Mastacembelus_armatus
FBgn0001995	mRpL4	82	52.479	ENSMZEG00005005809	mrpl4	79	52.479	Maylandia_zebra
FBgn0001995	mRpL4	73	55.760	ENSMAUG00000013451	Mrpl4	75	55.760	Mesocricetus_auratus
FBgn0001995	mRpL4	74	57.273	ENSMICG00000010267	MRPL4	74	57.273	Microcebus_murinus
FBgn0001995	mRpL4	85	50.198	ENSMOCG00000014755	Mrpl4	86	50.198	Microtus_ochrogaster
FBgn0001995	mRpL4	56	59.281	ENSMMOG00000013673	mrpl4	80	66.055	Mola_mola
FBgn0001995	mRpL4	75	56.757	ENSMODG00000005476	MRPL4	73	56.757	Monodelphis_domestica
FBgn0001995	mRpL4	82	52.479	ENSMALG00000002391	mrpl4	78	52.479	Monopterus_albus
FBgn0001995	mRpL4	76	55.310	MGP_CAROLIEiJ_G0031854	Mrpl4	77	55.310	Mus_caroli
FBgn0001995	mRpL4	76	55.310	ENSMUSG00000003299	Mrpl4	77	55.310	Mus_musculus
FBgn0001995	mRpL4	76	55.752	MGP_PahariEiJ_G0014720	Mrpl4	77	55.752	Mus_pahari
FBgn0001995	mRpL4	76	55.310	MGP_SPRETEiJ_G0032978	Mrpl4	77	55.310	Mus_spretus
FBgn0001995	mRpL4	76	53.070	ENSMPUG00000006825	MRPL4	94	47.872	Mustela_putorius_furo
FBgn0001995	mRpL4	76	55.066	ENSMLUG00000012280	MRPL4	88	55.066	Myotis_lucifugus
FBgn0001995	mRpL4	78	54.622	ENSNGAG00000014705	Mrpl4	84	54.622	Nannospalax_galili
FBgn0001995	mRpL4	82	52.893	ENSNBRG00000004804	mrpl4	79	52.893	Neolamprologus_brichardi
FBgn0001995	mRpL4	63	38.624	ENSNLEG00000012155	-	60	43.511	Nomascus_leucogenys
FBgn0001995	mRpL4	77	45.299	ENSMEUG00000002199	MRPL4	90	45.299	Notamacropus_eugenii
FBgn0001995	mRpL4	73	56.682	ENSOPRG00000005735	MRPL4	73	56.682	Ochotona_princeps
FBgn0001995	mRpL4	73	55.760	ENSODEG00000016194	MRPL4	75	55.760	Octodon_degus
FBgn0001995	mRpL4	82	52.066	ENSONIG00000000136	mrpl4	80	52.066	Oreochromis_niloticus
FBgn0001995	mRpL4	65	56.477	ENSOANG00000013891	MRPL4	93	56.477	Ornithorhynchus_anatinus
FBgn0001995	mRpL4	50	45.395	ENSOCUG00000029187	-	93	45.513	Oryctolagus_cuniculus
FBgn0001995	mRpL4	73	55.556	ENSORLG00000000085	mrpl4	77	52.066	Oryzias_latipes
FBgn0001995	mRpL4	73	55.093	ENSORLG00020020476	mrpl4	80	51.653	Oryzias_latipes_hni
FBgn0001995	mRpL4	73	55.093	ENSORLG00015020892	mrpl4	80	51.653	Oryzias_latipes_hsok
FBgn0001995	mRpL4	95	48.944	ENSOGAG00000011051	MRPL4	95	48.944	Otolemur_garnettii
FBgn0001995	mRpL4	92	47.636	ENSOARG00000015602	MRPL4	95	48.188	Ovis_aries
FBgn0001995	mRpL4	73	57.604	ENSPPAG00000041740	-	70	57.604	Pan_paniscus
FBgn0001995	mRpL4	65	52.062	ENSPPRG00000004312	MRPL4	76	52.062	Panthera_pardus
FBgn0001995	mRpL4	65	52.062	ENSPTIG00000010912	MRPL4	74	52.062	Panthera_tigris_altaica
FBgn0001995	mRpL4	73	57.143	ENSPTRG00000010462	MRPL4	70	57.143	Pan_troglodytes
FBgn0001995	mRpL4	73	56.221	ENSPANG00000001265	MRPL4	70	56.221	Papio_anubis
FBgn0001995	mRpL4	73	54.839	ENSPKIG00000008086	mrpl4	72	54.839	Paramormyrops_kingsleyae
FBgn0001995	mRpL4	81	51.452	ENSPMGG00000002329	mrpl4	85	53.261	Periophthalmus_magnuspinnatus
FBgn0001995	mRpL4	88	51.154	ENSPEMG00000017474	Mrpl4	89	51.154	Peromyscus_maniculatus_bairdii
FBgn0001995	mRpL4	73	57.143	ENSPMAG00000007691	mrpl4	85	57.143	Petromyzon_marinus
FBgn0001995	mRpL4	73	52.778	ENSPFOG00000013329	mrpl4	80	50.413	Poecilia_formosa
FBgn0001995	mRpL4	73	52.778	ENSPLAG00000012864	mrpl4	80	50.413	Poecilia_latipinna
FBgn0001995	mRpL4	73	52.778	ENSPMEG00000004937	mrpl4	80	50.413	Poecilia_mexicana
FBgn0001995	mRpL4	82	50.413	ENSPREG00000021621	mrpl4	85	50.413	Poecilia_reticulata
FBgn0001995	mRpL4	73	57.143	ENSPPYG00000009547	MRPL4	70	57.143	Pongo_abelii
FBgn0001995	mRpL4	58	56.395	ENSPCAG00000002385	MRPL4	73	56.395	Procavia_capensis
FBgn0001995	mRpL4	74	55.455	ENSPCOG00000016733	MRPL4	73	55.455	Propithecus_coquereli
FBgn0001995	mRpL4	73	41.096	ENSPVAG00000003681	MRPL4	70	41.096	Pteropus_vampyrus
FBgn0001995	mRpL4	82	52.479	ENSPNYG00000023505	mrpl4	82	52.479	Pundamilia_nyererei
FBgn0001995	mRpL4	73	53.241	ENSPNAG00000011785	mrpl4	64	53.241	Pygocentrus_nattereri
FBgn0001995	mRpL4	73	55.760	ENSRNOG00000020659	Mrpl4	74	55.760	Rattus_norvegicus
FBgn0001995	mRpL4	63	57.219	ENSRBIG00000032283	-	91	56.774	Rhinopithecus_bieti
FBgn0001995	mRpL4	95	47.902	ENSRROG00000003982	MRPL4	95	47.902	Rhinopithecus_roxellana
FBgn0001995	mRpL4	72	57.009	ENSSBOG00000020666	MRPL4	73	57.009	Saimiri_boliviensis_boliviensis
FBgn0001995	mRpL4	94	49.104	ENSSHAG00000008539	MRPL4	93	49.104	Sarcophilus_harrisii
FBgn0001995	mRpL4	73	54.378	ENSSFOG00015003308	mrpl4	71	54.378	Scleropages_formosus
FBgn0001995	mRpL4	73	46.759	ENSSMAG00000021118	mrpl4	79	44.628	Scophthalmus_maximus
FBgn0001995	mRpL4	86	50.394	ENSSDUG00000002078	mrpl4	83	50.394	Seriola_dumerili
FBgn0001995	mRpL4	86	50.394	ENSSLDG00000015083	mrpl4	83	50.394	Seriola_lalandi_dorsalis
FBgn0001995	mRpL4	73	56.019	ENSSPAG00000010120	mrpl4	72	56.019	Stegastes_partitus
FBgn0001995	mRpL4	90	51.661	ENSSSCG00000013656	MRPL4	92	51.661	Sus_scrofa
FBgn0001995	mRpL4	86	49.213	ENSTRUG00000008532	mrpl4	95	57.692	Takifugu_rubripes
FBgn0001995	mRpL4	73	50.463	ENSTNIG00000003265	mrpl4	80	47.521	Tetraodon_nigroviridis
FBgn0001995	mRpL4	74	52.252	ENSTBEG00000006336	MRPL4	90	52.252	Tupaia_belangeri
FBgn0001995	mRpL4	73	53.211	ENSTTRG00000009532	MRPL4	70	53.211	Tursiops_truncatus
FBgn0001995	mRpL4	63	53.723	ENSUAMG00000020392	MRPL4	62	53.723	Ursus_americanus
FBgn0001995	mRpL4	73	54.839	ENSUMAG00000025105	MRPL4	74	54.839	Ursus_maritimus
FBgn0001995	mRpL4	73	54.338	ENSVVUG00000028961	MRPL4	74	54.338	Vulpes_vulpes
FBgn0001995	mRpL4	89	46.442	ENSXETG00000022060	mrpl4	90	46.442	Xenopus_tropicalis
FBgn0001995	mRpL4	82	48.770	ENSXCOG00000011438	mrpl4	80	48.770	Xiphophorus_couchianus
FBgn0001995	mRpL4	82	50.413	ENSXMAG00000030102	mrpl4	83	49.180	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	11279069.	ISS	Function
GO:0003735	structural constituent of ribosome	17927810.	TAS	Function
GO:0005762	mitochondrial large ribosomal subunit	11279069.	ISS	Component
GO:0005762	mitochondrial large ribosomal subunit	17927810.	TAS	Component
GO:0006412	translation	11279069.	ISS	Process
GO:0032543	mitochondrial translation	17927810.	TAS	Process