EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0002593 (Gene tree)
Gene ID: 33214
Gene Symbol: RpLP1
Alias: -
Full Name: Ribosomal protein LP1
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 913 bases
Position: chr2L:419952-420864
Accession: FBgn0002593
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0077716	Ribosomal_60s	PF00428.19	6.3e-29	1	1
FBpp0304265	Ribosomal_60s	PF00428.19	6.3e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0331932	-	768	-	FBpp0304265	112 (aa)	-	P08570
FBtr0078056	-	601	-	FBpp0077716	112 (aa)	-	P08570

Gene Model

Click here to download FBgn0002593's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0002593's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0002593	RpLP1	100	66.071	WBGene00004409	rla-1	100	66.071	Caenorhabditis_elegans
FBgn0002593	RpLP1	96	54.630	ENSCSAVG00000007412	-	97	57.407	Ciona_savignyi
FBgn0002593	RpLP1	100	51.327	ENSOMEG00000012182	-	100	53.982	Oryzias_melastigma
FBgn0002593	RpLP1	100	46.429	YDL081C	RPP1A	100	47.321	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002181	cytoplasmic translation	21873635.	IBA	Process
GO:0002181	cytoplasmic translation	16889426.	IC	Process
GO:0002181	cytoplasmic translation	17927810.	TAS	Process
GO:0003735	structural constituent of ribosome	16889426.	HDA	Function
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	17927810.	TAS	Function
GO:0006414	translational elongation	-	IEA	Process
GO:0022625	cytosolic large ribosomal subunit	21873635.	IBA	Component
GO:0022625	cytosolic large ribosomal subunit	17927810.	TAS	Component
GO:0022626	cytosolic ribosome	16889426.	HDA	Component
GO:0030295	protein kinase activator activity	21873635.	IBA	Function
GO:0043021	ribonucleoprotein complex binding	21873635.	IBA	Function