EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0002787 (Gene tree)
Gene ID: 37894
Gene Symbol: Rpn8
Alias: -
Full Name: Regulatory particle non-ATPase 8
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 4500
Position: chr2R: 24400028-24404527
Accession: FBgn0002787
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0072290	-	1456	-	FBpp0072197	338 (aa)	-	P26270
FBtr0332921	-	1473	-	FBpp0305141	338 (aa)	-	P26270
FBtr0330237	-	1456	-	FBpp0303270	358 (aa)	-	A0A0B4KFH4

Gene Model

Click here to download FBgn0002787's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0002787's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0002787	Rpn8	85	81.597	ENSG00000103035	PSMD7	100	88.889	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000502	proteasome complex	21873635.	IBA	Component
GO:0000502	proteasome complex	19581588.	IDA	Component
GO:0003674	molecular_function	-	ND	Function
GO:0005838	proteasome regulatory particle	10893261.14652013.	IDA	Component
GO:0005838	proteasome regulatory particle	10893261.	ISS	Component
GO:0008541	proteasome regulatory particle, lid subcomplex	10893261.	ISS	Component
GO:0030425	dendrite	16210248.	IMP	Component
GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	21873635.	IBA	Process
GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	14652013.	IC	Process
GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	23800266.	IMP	Process