EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0002989 (Gene tree)
Gene ID: 33507
Gene Symbol: okr
Alias: -
Full Name: okra
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 3166 bases
Position: chr2L:2989594-2992759
Accession: FBgn0002989
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0077357	ResIII	PF04851.15	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0077673	-	2878	-	FBpp0077357	784 (aa)	-	O76460

Gene Model

Click here to download FBgn0002989's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0002989's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0002989	okr	63	31.041	FBgn0032157	Etl1	60	30.943
FBgn0002989	okr	60	34.831	FBgn0039338	XNP	51	34.328
FBgn0002989	okr	66	30.943	FBgn0023395	Chd3	55	30.943

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0002989	okr	95	54.787	ENSG00000085999	RAD54L	94	71.875	Homo_sapiens
FBgn0002989	okr	95	51.921	ENSAPOG00000011643	rad54l	99	51.921	Acanthochromis_polyacanthus
FBgn0002989	okr	95	54.293	ENSAMEG00000013902	RAD54L	99	54.293	Ailuropoda_melanoleuca
FBgn0002989	okr	93	54.692	ENSACIG00000001939	rad54l	99	54.692	Amphilophus_citrinellus
FBgn0002989	okr	95	53.968	ENSAOCG00000017576	rad54l	99	53.968	Amphiprion_ocellaris
FBgn0002989	okr	90	55.168	ENSAPEG00000020658	rad54l	98	55.168	Amphiprion_percula
FBgn0002989	okr	86	57.227	ENSATEG00000006767	rad54l	96	57.227	Anabas_testudineus
FBgn0002989	okr	87	58.419	ENSAPLG00000006389	RAD54L	97	58.419	Anas_platyrhynchos
FBgn0002989	okr	95	55.570	ENSACAG00000002312	RAD54L	99	55.570	Anolis_carolinensis
FBgn0002989	okr	95	54.920	ENSANAG00000035439	RAD54L	99	54.920	Aotus_nancymaae
FBgn0002989	okr	95	54.606	ENSACLG00000018711	rad54l	99	54.606	Astatotilapia_calliptera
FBgn0002989	okr	95	55.364	ENSAMXG00000012777	rad54l	99	55.364	Astyanax_mexicanus
FBgn0002989	okr	95	54.894	ENSBTAG00000019901	RAD54L	99	54.894	Bos_taurus
FBgn0002989	okr	88	52.735	WBGene00004298	rad-54	86	52.735	Caenorhabditis_elegans
FBgn0002989	okr	92	55.830	ENSCJAG00000021080	RAD54L	91	55.830	Callithrix_jacchus
FBgn0002989	okr	95	54.967	ENSCAFG00000004272	RAD54L	99	54.967	Canis_familiaris
FBgn0002989	okr	95	54.907	ENSCAFG00020015066	RAD54L	99	54.907	Canis_lupus_dingo
FBgn0002989	okr	95	54.967	ENSCHIG00000020118	RAD54L	99	54.967	Capra_hircus
FBgn0002989	okr	95	55.113	ENSTSYG00000002032	RAD54L	99	55.113	Carlito_syrichta
FBgn0002989	okr	95	54.654	ENSCPOG00000006768	RAD54L	99	54.654	Cavia_porcellus
FBgn0002989	okr	95	55.556	ENSCCAG00000025783	RAD54L	99	55.556	Cebus_capucinus
FBgn0002989	okr	95	54.787	ENSCATG00000030589	RAD54L	99	54.787	Cercocebus_atys
FBgn0002989	okr	95	55.452	ENSCLAG00000004645	RAD54L	99	55.452	Chinchilla_lanigera
FBgn0002989	okr	95	54.654	ENSCSAG00000001229	RAD54L	99	54.654	Chlorocebus_sabaeus
FBgn0002989	okr	95	55.040	ENSCPBG00000005675	RAD54L	99	55.040	Chrysemys_picta_bellii
FBgn0002989	okr	95	52.934	ENSCING00000024456	-	99	52.934	Ciona_intestinalis
FBgn0002989	okr	93	53.538	ENSCSAVG00000010859	-	97	53.538	Ciona_savignyi
FBgn0002989	okr	95	54.787	ENSCANG00000034891	RAD54L	99	54.787	Colobus_angolensis_palliatus
FBgn0002989	okr	95	55.053	ENSCGRG00001014807	Rad54l	99	55.053	Cricetulus_griseus_chok1gshd
FBgn0002989	okr	95	55.053	ENSCGRG00000016038	Rad54l	99	55.053	Cricetulus_griseus_crigri
FBgn0002989	okr	86	57.481	ENSCSEG00000001983	rad54l	93	57.481	Cynoglossus_semilaevis
FBgn0002989	okr	72	63.415	ENSCVAG00000019561	rad54l	99	63.415	Cyprinodon_variegatus
FBgn0002989	okr	95	55.040	ENSDARG00000018623	rad54l	99	55.040	Danio_rerio
FBgn0002989	okr	95	55.319	ENSDNOG00000003395	RAD54L	99	55.319	Dasypus_novemcinctus
FBgn0002989	okr	95	52.203	ENSDORG00000002632	Rad54l	99	52.203	Dipodomys_ordii
FBgn0002989	okr	74	50.833	ENSETEG00000000550	RAD54L	77	51.667	Echinops_telfairi
FBgn0002989	okr	95	54.847	ENSEASG00005004511	RAD54L	96	57.926	Equus_asinus_asinus
FBgn0002989	okr	95	54.920	ENSECAG00000008760	RAD54L	99	54.920	Equus_caballus
FBgn0002989	okr	86	58.728	ENSEEUG00000008113	RAD54L	90	58.728	Erinaceus_europaeus
FBgn0002989	okr	95	53.947	ENSELUG00000002295	rad54l	99	53.947	Esox_lucius
FBgn0002989	okr	95	54.557	ENSFCAG00000003444	RAD54L	99	54.557	Felis_catus
FBgn0002989	okr	86	58.616	ENSFALG00000009480	RAD54L	99	54.775	Ficedula_albicollis
FBgn0002989	okr	95	54.980	ENSFDAG00000007806	RAD54L	99	54.980	Fukomys_damarensis
FBgn0002989	okr	61	49.281	ENSFHEG00000009824	rad54l	82	49.281	Fundulus_heteroclitus
FBgn0002989	okr	87	56.914	ENSGMOG00000014568	rad54l	93	56.914	Gadus_morhua
FBgn0002989	okr	95	55.733	ENSGALG00000010356	RAD54L	92	55.733	Gallus_gallus
FBgn0002989	okr	87	53.256	ENSGAFG00000011110	rad54l	100	53.256	Gambusia_affinis
FBgn0002989	okr	95	53.121	ENSGACG00000003111	rad54l	97	53.121	Gasterosteus_aculeatus
FBgn0002989	okr	95	55.113	ENSGAGG00000014089	RAD54L	95	55.113	Gopherus_agassizii
FBgn0002989	okr	95	54.654	ENSGGOG00000010602	RAD54L	99	54.654	Gorilla_gorilla
FBgn0002989	okr	95	54.255	ENSHBUG00000007793	rad54l	99	54.255	Haplochromis_burtoni
FBgn0002989	okr	95	54.714	ENSHGLG00000000753	RAD54L	99	54.714	Heterocephalus_glaber_female
FBgn0002989	okr	95	54.582	ENSHGLG00100016987	RAD54L	99	54.582	Heterocephalus_glaber_male
FBgn0002989	okr	86	57.988	ENSIPUG00000015999	rad54l	96	57.988	Ictalurus_punctatus
FBgn0002989	okr	95	54.388	ENSSTOG00000029125	RAD54L	99	54.388	Ictidomys_tridecemlineatus
FBgn0002989	okr	95	46.277	ENSJJAG00000000235	-	99	46.277	Jaculus_jaculus
FBgn0002989	okr	95	54.873	ENSKMAG00000009944	rad54l	99	54.873	Kryptolebias_marmoratus
FBgn0002989	okr	95	54.021	ENSLBEG00000014617	rad54l	96	57.589	Labrus_bergylta
FBgn0002989	okr	95	53.785	ENSLOCG00000004144	rad54l	100	54.070	Lepisosteus_oculatus
FBgn0002989	okr	95	54.414	ENSLAFG00000007583	RAD54L	99	54.545	Loxodonta_africana
FBgn0002989	okr	95	54.654	ENSMFAG00000031241	RAD54L	99	54.654	Macaca_fascicularis
FBgn0002989	okr	95	54.654	ENSMMUG00000011568	RAD54L	99	54.654	Macaca_mulatta
FBgn0002989	okr	95	54.787	ENSMNEG00000038562	RAD54L	99	54.787	Macaca_nemestrina
FBgn0002989	okr	95	54.787	ENSMLEG00000038145	RAD54L	99	54.787	Mandrillus_leucophaeus
FBgn0002989	okr	95	53.553	ENSMAMG00000022180	rad54l	99	57.059	Mastacembelus_armatus
FBgn0002989	okr	95	54.606	ENSMZEG00005018081	rad54l	99	54.606	Maylandia_zebra
FBgn0002989	okr	95	55.541	ENSMGAG00000010634	RAD54L	99	55.541	Meleagris_gallopavo
FBgn0002989	okr	95	54.980	ENSMAUG00000020076	Rad54l	99	54.980	Mesocricetus_auratus
FBgn0002989	okr	95	55.820	ENSMICG00000003266	RAD54L	99	55.820	Microcebus_murinus
FBgn0002989	okr	95	54.920	ENSMOCG00000001778	Rad54l	99	54.920	Microtus_ochrogaster
FBgn0002989	okr	95	52.793	ENSMALG00000021148	rad54l	99	53.004	Monopterus_albus
FBgn0002989	okr	95	53.359	MGP_CAROLIEiJ_G0026325	Rad54l	99	53.359	Mus_caroli
FBgn0002989	okr	95	55.851	ENSMUSG00000028702	Rad54l	99	55.851	Mus_musculus
FBgn0002989	okr	95	55.305	MGP_PahariEiJ_G0028657	Rad54l	99	55.305	Mus_pahari
FBgn0002989	okr	95	55.851	MGP_SPRETEiJ_G0027297	Rad54l	99	55.851	Mus_spretus
FBgn0002989	okr	95	54.111	ENSMPUG00000012883	RAD54L	99	54.111	Mustela_putorius_furo
FBgn0002989	okr	95	54.993	ENSMLUG00000003763	RAD54L	99	54.993	Myotis_lucifugus
FBgn0002989	okr	95	55.053	ENSNGAG00000024213	Rad54l	99	55.053	Nannospalax_galili
FBgn0002989	okr	95	54.654	ENSNLEG00000016548	RAD54L	99	54.654	Nomascus_leucogenys
FBgn0002989	okr	86	55.852	ENSMEUG00000006793	RAD54L	99	55.852	Notamacropus_eugenii
FBgn0002989	okr	86	62.324	ENSOPRG00000016016	RAD54L	90	62.324	Ochotona_princeps
FBgn0002989	okr	95	55.291	ENSODEG00000008519	RAD54L	99	55.291	Octodon_degus
FBgn0002989	okr	95	54.339	ENSONIG00000007659	rad54l	99	54.339	Oreochromis_niloticus
FBgn0002989	okr	95	54.822	ENSOCUG00000005229	RAD54L	99	54.822	Oryctolagus_cuniculus
FBgn0002989	okr	87	56.828	ENSORLG00000002958	rad54l	99	54.267	Oryzias_latipes
FBgn0002989	okr	95	54.400	ENSORLG00020006554	rad54l	99	56.828	Oryzias_latipes_hni
FBgn0002989	okr	87	56.828	ENSORLG00015002907	rad54l	99	54.400	Oryzias_latipes_hsok
FBgn0002989	okr	95	53.538	ENSOMEG00000007770	rad54l	99	53.805	Oryzias_melastigma
FBgn0002989	okr	95	54.557	ENSOARG00000002264	RAD54L	99	54.557	Ovis_aries
FBgn0002989	okr	95	54.787	ENSPPAG00000031222	RAD54L	99	54.787	Pan_paniscus
FBgn0002989	okr	95	54.557	ENSPPRG00000010317	RAD54L	99	54.557	Panthera_pardus
FBgn0002989	okr	95	54.557	ENSPTIG00000012200	RAD54L	99	54.557	Panthera_tigris_altaica
FBgn0002989	okr	95	54.787	ENSPTRG00000000689	RAD54L	99	54.787	Pan_troglodytes
FBgn0002989	okr	95	54.787	ENSPANG00000016295	RAD54L	99	54.787	Papio_anubis
FBgn0002989	okr	95	54.993	ENSPKIG00000016172	rad54l	99	55.526	Paramormyrops_kingsleyae
FBgn0002989	okr	86	58.910	ENSPSIG00000003258	RAD54L	92	58.910	Pelodiscus_sinensis
FBgn0002989	okr	87	57.918	ENSPMGG00000016335	rad54l	92	57.918	Periophthalmus_magnuspinnatus
FBgn0002989	okr	95	55.319	ENSPEMG00000011422	Rad54l	99	55.319	Peromyscus_maniculatus_bairdii
FBgn0002989	okr	95	52.255	ENSPMAG00000007719	rad54l	99	52.255	Petromyzon_marinus
FBgn0002989	okr	95	54.328	ENSPCIG00000029032	RAD54L	99	54.328	Phascolarctos_cinereus
FBgn0002989	okr	78	57.423	ENSPFOG00000013732	rad54l	96	57.423	Poecilia_formosa
FBgn0002989	okr	77	55.447	ENSPLAG00000023416	rad54l	99	55.447	Poecilia_latipinna
FBgn0002989	okr	87	53.690	ENSPMEG00000008299	rad54l	100	53.690	Poecilia_mexicana
FBgn0002989	okr	95	53.548	ENSPREG00000019955	rad54l	99	53.548	Poecilia_reticulata
FBgn0002989	okr	89	52.021	ENSPPYG00000001398	RAD54L	99	52.021	Pongo_abelii
FBgn0002989	okr	66	67.000	ENSPCAG00000005323	RAD54L	70	67.000	Procavia_capensis
FBgn0002989	okr	95	55.452	ENSPCOG00000015423	RAD54L	99	55.452	Propithecus_coquereli
FBgn0002989	okr	86	56.706	ENSPNYG00000002942	rad54l	95	56.706	Pundamilia_nyererei
FBgn0002989	okr	95	55.186	ENSPNAG00000012483	rad54l	99	55.186	Pygocentrus_nattereri
FBgn0002989	okr	95	55.718	ENSRNOG00000013148	Rad54l	99	55.718	Rattus_norvegicus
FBgn0002989	okr	95	54.521	ENSRBIG00000043495	RAD54L	99	54.521	Rhinopithecus_bieti
FBgn0002989	okr	95	54.654	ENSRROG00000020844	RAD54L	99	54.654	Rhinopithecus_roxellana
FBgn0002989	okr	72	47.164	YGL163C	RAD54	66	48.185	Saccharomyces_cerevisiae
FBgn0002989	okr	95	55.319	ENSSBOG00000024672	RAD54L	99	55.319	Saimiri_boliviensis_boliviensis
FBgn0002989	okr	95	54.271	ENSSHAG00000000110	RAD54L	99	54.271	Sarcophilus_harrisii
FBgn0002989	okr	95	53.907	ENSSDUG00000019147	rad54l	99	53.907	Seriola_dumerili
FBgn0002989	okr	95	53.907	ENSSLDG00000012330	rad54l	99	53.907	Seriola_lalandi_dorsalis
FBgn0002989	okr	71	60.612	ENSSARG00000006689	RAD54L	89	60.612	Sorex_araneus
FBgn0002989	okr	86	56.406	ENSSPAG00000011016	rad54l	91	56.406	Stegastes_partitus
FBgn0002989	okr	95	54.775	ENSSSCG00000003905	RAD54L	99	54.775	Sus_scrofa
FBgn0002989	okr	86	58.910	ENSTGUG00000008233	RAD54L	99	55.040	Taeniopygia_guttata
FBgn0002989	okr	86	57.396	ENSTRUG00000008410	rad54l	95	57.396	Takifugu_rubripes
FBgn0002989	okr	86	57.926	ENSTNIG00000004716	rad54l	91	57.755	Tetraodon_nigroviridis
FBgn0002989	okr	86	54.882	ENSTTRG00000006315	RAD54L	90	54.882	Tursiops_truncatus
FBgn0002989	okr	86	57.647	ENSUAMG00000011824	RAD54L	91	57.647	Ursus_americanus
FBgn0002989	okr	86	56.324	ENSUMAG00000023603	RAD54L	91	56.324	Ursus_maritimus
FBgn0002989	okr	95	55.099	ENSVVUG00000007201	RAD54L	99	55.099	Vulpes_vulpes
FBgn0002989	okr	86	54.332	ENSXETG00000004369	rad54l	94	54.332	Xenopus_tropicalis
FBgn0002989	okr	53	49.519	ENSXCOG00000016028	rad54l	84	49.519	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000711	meiotic DNA repair synthesis	9732269.	IMP	Process
GO:0000724	double-strand break repair via homologous recombination	15105430.	IMP	Process
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	9732269.	IDA	Component
GO:0006281	DNA repair	10449356.	NAS	Process
GO:0006302	double-strand break repair	9315669.18957704.	IMP	Process
GO:0006302	double-strand break repair	14616073.	TAS	Process
GO:0006310	DNA recombination	9315669.	ISS	Process
GO:0006338	chromatin remodeling	15105430.	IMP	Process
GO:0006417	regulation of translation	9642168.	TAS	Process
GO:0007131	reciprocal meiotic recombination	18957704.	IMP	Process
GO:0007131	reciprocal meiotic recombination	10021357.10449356.	TAS	Process
GO:0008298	intracellular mRNA localization	9642168.	TAS	Process
GO:0010212	response to ionizing radiation	9315669.14704177.	IMP	Process
GO:0016817	hydrolase activity, acting on acid anhydrides	-	IEA	Function
GO:0030261	chromosome condensation	10449356.	TAS	Process
GO:0030716	oocyte fate determination	18957704.	IMP	Process
GO:0043150	DNA synthesis involved in double-strand break repair via homologous recombination	9732269.	IMP	Process
GO:0045003	double-strand break repair via synthesis-dependent strand annealing	17660539.	IMP	Process
GO:0046843	dorsal appendage formation	1783295.	HMP	Process
GO:0048477	oogenesis	1783295.	HMP	Process
GO:0048477	oogenesis	20522776.	IGI	Process
GO:0048477	oogenesis	10449356.	TAS	Process