EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
FBgn0003062 (Gene tree)
Gene ID
37662
Gene Symbol
Fib
Alias
-
Full Name
Fibrillarin
Gene Type
protein_coding
Species
Drosophila_melanogaster
Status
confidence
Strand
Minus strand
Length
1817 bases
Position
chr2R:23072909-23074725
Accession
FBgn0003062
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
FBpp0071892GCD14PF08704.100.0002111
FBpp0071892FibrillarinPF01269.172.4e-10811
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27197210The mRNA-bound proteome of the early fly embryoIC & embryos2016 Apr 28Wessels HHDOI: 10.1101/gr.200386.115
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
FBtr0071982-1318-FBpp0071892344 (aa)-Q9W1V3
Gene Model
Click here to download FBgn0003062's gene model file
Protein-Protein Interaction (PPI)

Clik here to download FBgn0003062's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
FBgn0003062Fib6647.162FBgn0038090CG109096647.162
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
FBgn0003062Fib6982.353ENSG00000105202FBL10082.969Homo_sapiens
FBgn0003062Fib8871.761ENSG00000188573FBLL17079.828Homo_sapiens
FBgn0003062Fib6985.169ENSAPOG00000015135fbl7385.169Acanthochromis_polyacanthus
FBgn0003062Fib8474.740ENSAMEG00000012669FBL6882.979Ailuropoda_melanoleuca
FBgn0003062Fib6978.571ENSAMEG00000007104FBLL19279.828Ailuropoda_melanoleuca
FBgn0003062Fib6785.281ENSACIG00000010958fbl8085.281Amphilophus_citrinellus
FBgn0003062Fib8576.370ENSAOCG00000008806fbl7685.398Amphiprion_ocellaris
FBgn0003062Fib8575.685ENSAPEG00000011843fbl7685.398Amphiprion_percula
FBgn0003062Fib6984.746ENSACAG00000016787-7684.746Anolis_carolinensis
FBgn0003062Fib6981.933ENSANAG00000029424-8282.553Aotus_nancymaae
FBgn0003062Fib7367.600ENSANAG00000019689-7073.272Aotus_nancymaae
FBgn0003062Fib6986.017ENSACLG00000005227fbl7586.017Astatotilapia_calliptera
FBgn0003062Fib6584.305ENSAMXG00000037402fbl6383.929Astyanax_mexicanus
FBgn0003062Fib6982.700ENSBTAG00000002579FBL7382.979Bos_taurus
FBgn0003062Fib6979.412ENSBTAG00000004657FBLL18080.342Bos_taurus
FBgn0003062Fib6776.293WBGene00001423fib-16676.293Caenorhabditis_elegans
FBgn0003062Fib6978.992ENSCJAG00000015548FBLL16979.487Callithrix_jacchus
FBgn0003062Fib8874.013ENSCJAG00000040785FBL5982.553Callithrix_jacchus
FBgn0003062Fib6978.151ENSCAFG00020003509FBLL17778.632Canis_lupus_dingo
FBgn0003062Fib7675.573ENSCHIG00000005751FBLL17480.342Capra_hircus
FBgn0003062Fib6982.700ENSCHIG00000021562FBL7182.979Capra_hircus
FBgn0003062Fib7673.563ENSTSYG00000030585FBLL18879.913Carlito_syrichta
FBgn0003062Fib8375.958ENSTSYG00000036873FBL7382.979Carlito_syrichta
FBgn0003062Fib6471.233ENSCAPG00000008751FBLL19971.233Cavia_aperea
FBgn0003062Fib6969.038ENSCAPG00000009974FBL6580.319Cavia_aperea
FBgn0003062Fib7368.924ENSCPOG00000025737FBLL17072.532Cavia_porcellus
FBgn0003062Fib8871.711ENSCPOG00000010192FBL7582.553Cavia_porcellus
FBgn0003062Fib6981.933ENSCCAG00000004830FBL7382.553Cebus_capucinus
FBgn0003062Fib6978.992ENSCCAG00000033894FBLL17079.487Cebus_capucinus
FBgn0003062Fib6982.353ENSCATG00000039255FBL7382.979Cercocebus_atys
FBgn0003062Fib8874.013ENSCLAG00000001639FBL7382.979Chinchilla_lanigera
FBgn0003062Fib7476.078ENSCLAG00000018056FBLL19179.828Chinchilla_lanigera
FBgn0003062Fib7575.676ENSCSAG00000010153FBLL17479.828Chlorocebus_sabaeus
FBgn0003062Fib6982.353ENSCSAG00000003783FBL7482.979Chlorocebus_sabaeus
FBgn0003062Fib6985.169ENSCPBG00000024047-7585.169Chrysemys_picta_bellii
FBgn0003062Fib7779.545ENSCING00000005048-7685.957Ciona_intestinalis
FBgn0003062Fib8378.873ENSCSAVG00000002367-10086.772Ciona_savignyi
FBgn0003062Fib8669.492ENSCANG00000043304FBLL17879.828Colobus_angolensis_palliatus
FBgn0003062Fib6982.353ENSCANG00000042053FBL7382.979Colobus_angolensis_palliatus
FBgn0003062Fib8571.918ENSCGRG00001010028Fbll17481.197Cricetulus_griseus_chok1gshd
FBgn0003062Fib6982.353ENSCGRG00001021702-7482.684Cricetulus_griseus_chok1gshd
FBgn0003062Fib8177.061ENSCGRG00000012705Fbl7482.684Cricetulus_griseus_crigri
FBgn0003062Fib8877.076ENSCSEG00000010310fbl7685.169Cynoglossus_semilaevis
FBgn0003062Fib8478.819ENSCVAG00000015561fbl7584.746Cyprinodon_variegatus
FBgn0003062Fib8578.571ENSDARG00000053912fbl7485.408Danio_rerio
FBgn0003062Fib6982.353ENSDNOG00000025216FBL7382.979Dasypus_novemcinctus
FBgn0003062Fib7082.083ENSDORG00000005756Fbl7682.979Dipodomys_ordii
FBgn0003062Fib6959.244ENSETEG00000003164FBL7359.574Echinops_telfairi
FBgn0003062Fib6885.532ENSEBUG00000016084fbl9785.408Eptatretus_burgeri
FBgn0003062Fib6982.353ENSEASG00005011787FBL5682.979Equus_asinus_asinus
FBgn0003062Fib7569.767ENSEASG00005012784FBLL16579.000Equus_asinus_asinus
FBgn0003062Fib8571.331ENSECAG00000023600FBLL17179.237Equus_caballus
FBgn0003062Fib6982.353ENSECAG00000023221FBL7082.979Equus_caballus
FBgn0003062Fib8574.315ENSELUG00000022537fbl7783.628Esox_lucius
FBgn0003062Fib6982.353ENSFCAG00000003026FBL7582.979Felis_catus
FBgn0003062Fib8370.526ENSFDAG00000018404FBLL18081.116Fukomys_damarensis
FBgn0003062Fib8871.053ENSFDAG00000021499FBL7382.553Fukomys_damarensis
FBgn0003062Fib7680.989ENSFHEG00000010854fbl7585.169Fundulus_heteroclitus
FBgn0003062Fib6685.088ENSGMOG00000007678fbl7584.348Gadus_morhua
FBgn0003062Fib6185.167ENSGAFG00000008992fbl9985.167Gambusia_affinis
FBgn0003062Fib6885.043ENSGACG00000004194fbl9885.463Gasterosteus_aculeatus
FBgn0003062Fib6779.352ENSGAGG00000003006-6279.352Gopherus_agassizii
FBgn0003062Fib6982.353ENSGGOG00000013076FBL7382.979Gorilla_gorilla
FBgn0003062Fib6986.017ENSHBUG00000011229fbl7586.017Haplochromis_burtoni
FBgn0003062Fib6981.933ENSHGLG00000009686FBL7382.553Heterocephalus_glaber_female
FBgn0003062Fib8173.665ENSHGLG00000015259FBLL17780.000Heterocephalus_glaber_female
FBgn0003062Fib7475.781ENSHGLG00100021287FBLL19280.687Heterocephalus_glaber_male
FBgn0003062Fib6981.933ENSHGLG00100015471FBL7382.553Heterocephalus_glaber_male
FBgn0003062Fib7283.333ENSHCOG00000021211fbl7684.746Hippocampus_comes
FBgn0003062Fib6885.043ENSIPUG00000009464fbl7484.322Ictalurus_punctatus
FBgn0003062Fib5880.500ENSSTOG00000031046FBLL19680.500Ictidomys_tridecemlineatus
FBgn0003062Fib6981.933ENSSTOG00000012486FBL7482.553Ictidomys_tridecemlineatus
FBgn0003062Fib6981.933ENSJJAG00000018359Fbl7382.553Jaculus_jaculus
FBgn0003062Fib8270.819ENSJJAG00000000811Fbll18279.487Jaculus_jaculus
FBgn0003062Fib8675.338ENSKMAG00000003716fbl7684.746Kryptolebias_marmoratus
FBgn0003062Fib6885.408ENSLBEG00000017315fbl8184.681Labrus_bergylta
FBgn0003062Fib6669.163ENSLACG00000014561fbl6768.534Latimeria_chalumnae
FBgn0003062Fib6879.399ENSLAFG00000032132FBLL19979.399Loxodonta_africana
FBgn0003062Fib8675.593ENSLAFG00000000171FBL7482.553Loxodonta_africana
FBgn0003062Fib6982.353ENSMFAG00000043908FBL7382.979Macaca_fascicularis
FBgn0003062Fib6978.992ENSMFAG00000036422FBLL18379.828Macaca_fascicularis
FBgn0003062Fib6982.353ENSMMUG00000022725FBL8082.418Macaca_mulatta
FBgn0003062Fib6978.992ENSMMUG00000012520FBLL17879.487Macaca_mulatta
FBgn0003062Fib8874.013ENSMNEG00000040045FBL7482.979Macaca_nemestrina
FBgn0003062Fib8071.886ENSMLEG00000040259FBLL17579.828Mandrillus_leucophaeus
FBgn0003062Fib6982.353ENSMLEG00000042975FBL7482.979Mandrillus_leucophaeus
FBgn0003062Fib8577.055ENSMAMG00000006804fbl7785.841Mastacembelus_armatus
FBgn0003062Fib6986.017ENSMZEG00005025246fbl7586.017Maylandia_zebra
FBgn0003062Fib6982.353ENSMAUG00000003620Fbl7282.979Mesocricetus_auratus
FBgn0003062Fib6881.624ENSMAUG00000015741Fbll17681.624Mesocricetus_auratus
FBgn0003062Fib6981.933ENSMICG00000007686FBL7482.553Microcebus_murinus
FBgn0003062Fib6982.353ENSMOCG00000012820Fbl7382.684Microtus_ochrogaster
FBgn0003062Fib9070.550ENSMOCG00000022683Fbll17881.974Microtus_ochrogaster
FBgn0003062Fib6784.848ENSMMOG00000006454fbl8184.848Mola_mola
FBgn0003062Fib6985.593ENSMODG00000013702-7385.593Monodelphis_domestica
FBgn0003062Fib7881.273ENSMALG00000015601fbl8185.593Monopterus_albus
FBgn0003062Fib6981.092MGP_CAROLIEiJ_G0016207Fbll17581.624Mus_caroli
FBgn0003062Fib6982.353MGP_CAROLIEiJ_G0029434Fbl7282.979Mus_caroli
FBgn0003062Fib6982.353ENSMUSG00000046865Fbl7282.979Mus_musculus
FBgn0003062Fib7677.099ENSMUSG00000051062Fbll17581.624Mus_musculus
FBgn0003062Fib6982.353MGP_PahariEiJ_G0012670Fbl7282.979Mus_pahari
FBgn0003062Fib8574.061MGP_PahariEiJ_G0017343Fbll17481.624Mus_pahari
FBgn0003062Fib7775.472MGP_SPRETEiJ_G0017048Fbll17581.624Mus_spretus
FBgn0003062Fib6982.353MGP_SPRETEiJ_G0030532Fbl7282.979Mus_spretus
FBgn0003062Fib7674.713ENSMPUG00000013045FBLL18879.574Mustela_putorius_furo
FBgn0003062Fib7971.795ENSMLUG00000011858FBLL17378.879Myotis_lucifugus
FBgn0003062Fib5586.243ENSMLUG00000030525FBL9786.243Myotis_lucifugus
FBgn0003062Fib6979.412ENSNGAG00000012285Fbll17580.342Nannospalax_galili
FBgn0003062Fib6982.353ENSNGAG00000022243Fbl7482.684Nannospalax_galili
FBgn0003062Fib8578.498ENSNBRG00000024409fbl8085.593Neolamprologus_brichardi
FBgn0003062Fib6978.992ENSNLEG00000031565FBLL16979.828Nomascus_leucogenys
FBgn0003062Fib8274.823ENSNLEG00000014234FBL7382.979Nomascus_leucogenys
FBgn0003062Fib8577.551ENSMEUG00000014684-7684.322Notamacropus_eugenii
FBgn0003062Fib9166.879ENSODEG00000019199FBLL17279.487Octodon_degus
FBgn0003062Fib6981.933ENSODEG00000001001FBL7382.553Octodon_degus
FBgn0003062Fib7779.924ENSONIG00000008042fbl7286.017Oreochromis_niloticus
FBgn0003062Fib6683.260ENSOANG00000014658-8983.260Ornithorhynchus_anatinus
FBgn0003062Fib6982.353ENSOCUG00000009027FBL9082.979Oryctolagus_cuniculus
FBgn0003062Fib7474.809ENSOCUG00000007557FBLL18779.828Oryctolagus_cuniculus
FBgn0003062Fib6985.169ENSORLG00000003405fbl6885.169Oryzias_latipes
FBgn0003062Fib6985.169ENSORLG00015011532fbl7385.169Oryzias_latipes_hsok
FBgn0003062Fib8575.170ENSOMEG00000019309fbl7685.333Oryzias_melastigma
FBgn0003062Fib6981.933ENSOGAG00000006463FBL6782.553Otolemur_garnettii
FBgn0003062Fib6878.541ENSOARG00000014603FBLL19078.541Ovis_aries
FBgn0003062Fib9968.895ENSOARG00000006339FBL6882.979Ovis_aries
FBgn0003062Fib7276.305ENSPPAG00000015519-9079.399Pan_paniscus
FBgn0003062Fib6982.353ENSPPAG00000034630FBL7382.979Pan_paniscus
FBgn0003062Fib6982.353ENSPPRG00000002187FBL7582.979Panthera_pardus
FBgn0003062Fib7475.591ENSPPRG00000020963FBLL15179.915Panthera_pardus
FBgn0003062Fib6982.353ENSPTIG00000008381FBL8182.979Panthera_tigris_altaica
FBgn0003062Fib8874.013ENSPTRG00000010982FBL7382.979Pan_troglodytes
FBgn0003062Fib6479.452ENSPTRG00000040021-7280.093Pan_troglodytes
FBgn0003062Fib8671.864ENSPTRG00000046755FBLL17179.828Pan_troglodytes
FBgn0003062Fib6982.353ENSPANG00000004118FBL7382.979Papio_anubis
FBgn0003062Fib8380.488ENSPKIG00000018971fbl7486.864Paramormyrops_kingsleyae
FBgn0003062Fib6886.325ENSPSIG00000004704-9386.017Pelodiscus_sinensis
FBgn0003062Fib8071.875ENSPMGG00000003564fbl7685.333Periophthalmus_magnuspinnatus
FBgn0003062Fib6980.252ENSPEMG00000020325Fbll17481.197Peromyscus_maniculatus_bairdii
FBgn0003062Fib8375.088ENSPEMG00000015440-7382.684Peromyscus_maniculatus_bairdii
FBgn0003062Fib6980.932ENSPMAG00000007777fbl7180.932Petromyzon_marinus
FBgn0003062Fib6985.593ENSPCIG00000014607-7385.593Phascolarctos_cinereus
FBgn0003062Fib7580.233ENSPFOG00000000133fbl7684.746Poecilia_formosa
FBgn0003062Fib6784.716ENSPLAG00000021499fbl8784.416Poecilia_latipinna
FBgn0003062Fib7579.767ENSPMEG00000001897fbl7684.746Poecilia_mexicana
FBgn0003062Fib7579.377ENSPREG00000018169fbl7684.746Poecilia_reticulata
FBgn0003062Fib6982.353ENSPPYG00000009979FBL7382.979Pongo_abelii
FBgn0003062Fib6969.198ENSPCAG00000011523FBL7469.362Procavia_capensis
FBgn0003062Fib7574.525ENSPCOG00000020746FBLL17779.828Propithecus_coquereli
FBgn0003062Fib9971.681ENSPCOG00000015915FBL7382.553Propithecus_coquereli
FBgn0003062Fib6981.933ENSPVAG00000010849FBL7482.553Pteropus_vampyrus
FBgn0003062Fib6986.017ENSPNYG00000014278fbl7586.017Pundamilia_nyererei
FBgn0003062Fib6987.288ENSPNAG00000020888fbl7586.344Pygocentrus_nattereri
FBgn0003062Fib6982.353ENSRNOG00000019229Fbl7282.979Rattus_norvegicus
FBgn0003062Fib6981.092ENSRNOG00000015303Fbll17381.277Rattus_norvegicus
FBgn0003062Fib6982.353ENSRBIG00000029089FBL7382.979Rhinopithecus_bieti
FBgn0003062Fib6982.353ENSRROG00000012374FBL7382.979Rhinopithecus_roxellana
FBgn0003062Fib7368.340YDL014WNOP17270.638Saccharomyces_cerevisiae
FBgn0003062Fib8370.833ENSSBOG00000019476FBLL18079.828Saimiri_boliviensis_boliviensis
FBgn0003062Fib6981.933ENSSBOG00000033498FBL7482.553Saimiri_boliviensis_boliviensis
FBgn0003062Fib6985.593ENSSHAG00000003274-7385.593Sarcophilus_harrisii
FBgn0003062Fib6986.441ENSSFOG00015019399fbl7586.441Scleropages_formosus
FBgn0003062Fib6884.615ENSSMAG00000011853fbl7484.889Scophthalmus_maximus
FBgn0003062Fib6885.897ENSSDUG00000004103fbl7285.169Seriola_dumerili
FBgn0003062Fib6885.897ENSSLDG00000010053fbl7285.169Seriola_lalandi_dorsalis
FBgn0003062Fib6784.848ENSSLDG00000002539-9284.848Seriola_lalandi_dorsalis
FBgn0003062Fib8666.441ENSSARG00000008709FBL7469.915Sorex_araneus
FBgn0003062Fib6985.169ENSSPUG00000004770-7485.169Sphenodon_punctatus
FBgn0003062Fib8178.571ENSSPAG00000019953fbl7585.593Stegastes_partitus
FBgn0003062Fib8571.331ENSSSCG00000017013FBLL17080.258Sus_scrofa
FBgn0003062Fib6982.353ENSSSCG00000030510FBL7582.979Sus_scrofa
FBgn0003062Fib6886.325ENSTRUG00000004408fbl7985.526Takifugu_rubripes
FBgn0003062Fib7981.181ENSTNIG00000011668fbl7586.325Tetraodon_nigroviridis
FBgn0003062Fib6982.353ENSTBEG00000007755FBL7382.979Tupaia_belangeri
FBgn0003062Fib9269.206ENSTTRG00000016156FBLL17079.487Tursiops_truncatus
FBgn0003062Fib7080.833ENSTTRG00000003967FBL7281.702Tursiops_truncatus
FBgn0003062Fib6978.571ENSUAMG00000023304FBLL17179.487Ursus_americanus
FBgn0003062Fib6982.353ENSUAMG00000001699FBL7582.979Ursus_americanus
FBgn0003062Fib6583.482ENSUMAG00000019597FBL6583.482Ursus_maritimus
FBgn0003062Fib8169.643ENSVVUG00000003074FBLL18078.696Vulpes_vulpes
FBgn0003062Fib6885.470ENSXETG00000017830fbl7384.746Xenopus_tropicalis
FBgn0003062Fib6784.716ENSXCOG00000017201fbl6984.416Xiphophorus_couchianus
FBgn0003062Fib7581.323ENSXMAG00000008522fbl7584.746Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000494box C/D snoRNA 3'-end processing21873635.IBAProcess
GO:0001651dense fibrillar component-ISSComponent
GO:0003723RNA binding21873635.IBAFunction
GO:0005730nucleolus16272126.16533947.19066928.IDAComponent
GO:0005732small nucleolar ribonucleoprotein complex2884623.ISSComponent
GO:0008649rRNA methyltransferase activity21873635.IBAFunction
GO:0015030Cajal body21873635.IBAComponent
GO:0015030Cajal body16533947.IDAComponent
GO:0030532small nuclear ribonucleoprotein complex2884623.ISSComponent
GO:0031167rRNA methylation21873635.IBAProcess
GO:0031428box C/D snoRNP complex21873635.IBAComponent
GO:0032040small-subunit processome21873635.IBAComponent
GO:1990258histone glutamine methylation21873635.IBAProcess
GO:1990259histone-glutamine methyltransferase activity21873635.IBAFunction

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