EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0003256 (Gene tree)
Gene ID: 3354888
Gene Symbol: rl
Alias: -
Full Name: rolled
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 54466
Position: chr2R: 1071462-1125927
Accession: FBgn0003256
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0329920	-	6472	-	FBpp0302953	266 (aa)	-	P40417-1
FBtr0329919	-	2347	-	FBpp0302952	331 (aa)	-	P40417-2
FBtr0113701	-	1412	-	FBpp0112424	190 (aa)	-	A8Y4W5
FBtr0113700	-	1573	-	FBpp0112423	376 (aa)	-	P40417
FBtr0113703	-	1614	-	FBpp0112426	376 (aa)	-	P40417
FBtr0113702	-	1795	-	FBpp0112425	376 (aa)	-	P40417
FBtr0345337	-	2072	-	FBpp0311493	376 (aa)	-	P40417

Gene Model

Click here to download FBgn0003256's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0003256's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0003256	rl	97	85.271	ENSG00000100030	MAPK1	98	79.661	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000165	MAPK cascade	8033205.	IMP	Process
GO:0000278	mitotic cell cycle	16308331.	IMP	Process
GO:0004674	protein serine/threonine kinase activity	8946916.	IDA	Function
GO:0004707	MAP kinase activity	21873635.	IBA	Function
GO:0004707	MAP kinase activity	7601354.8033205.8047146.8798773.11357138.16362034.	IDA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	1378625.9729495.11782402.12963110.16308331.16763554.18571412.23827710.24046358.24348264.	IDA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005829	cytosol	1378625.9729495.11782402.16308331.16763554.17438281.18571412.23827710.24348264.	IDA	Component
GO:0007173	epidermal growth factor receptor signaling pathway	7601354.8798773.9531530.12169631.	IDA	Process
GO:0007173	epidermal growth factor receptor signaling pathway	9729495.	IEP	Process
GO:0007173	epidermal growth factor receptor signaling pathway	8124723.24348264.	IGI	Process
GO:0007173	epidermal growth factor receptor signaling pathway	8162856.11245584.	IMP	Process
GO:0007362	terminal region determination	9882506.	IEP	Process
GO:0007430	terminal branching, open tracheal system	25061859.	IMP	Process
GO:0007465	R7 cell fate commitment	8722784.	IGI	Process
GO:0007474	imaginal disc-derived wing vein specification	24348264.	IGI	Process
GO:0007474	imaginal disc-derived wing vein specification	15704110.23549788.	IMP	Process
GO:0007476	imaginal disc-derived wing morphogenesis	16308331.	IMP	Process
GO:0007479	leg disc proximal/distal pattern formation	15965980.	IEP	Process
GO:0007552	metamorphosis	19965758.	IMP	Process
GO:0008134	transcription factor binding	17255944.	IPI	Function
GO:0008284	positive regulation of cell proliferation	19141677.	IMP	Process
GO:0008286	insulin receptor signaling pathway	10823906.15337530.	IDA	Process
GO:0008293	torso signaling pathway	9882506.28166211.	IEP	Process
GO:0008293	torso signaling pathway	8124723.	IGI	Process
GO:0008340	determination of adult lifespan	26119340.	IMP	Process
GO:0008543	fibroblast growth factor receptor signaling pathway	12175485.15082772.20154139.	IDA	Process
GO:0008543	fibroblast growth factor receptor signaling pathway	25061859.	IMP	Process
GO:0009267	cellular response to starvation	18794330.	IMP	Process
GO:0010468	regulation of gene expression	21873635.	IBA	Process
GO:0016242	negative regulation of macroautophagy	18794330.	IMP	Process
GO:0019901	protein kinase binding	15487973.16763554.	IPI	Function
GO:0030054	cell junction	17438281.	IDA	Component
GO:0031594	neuromuscular junction	24046358.	IDA	Component
GO:0034334	adherens junction maintenance	17438281.	IMP	Process
GO:0034614	cellular response to reactive oxygen species	16451733.	IDA	Process
GO:0035169	lymph gland plasmatocyte differentiation	23603494.	IMP	Process
GO:0035170	lymph gland crystal cell differentiation	23603494.	IMP	Process
GO:0035556	intracellular signal transduction	21873635.	IBA	Process
GO:0045500	sevenless signaling pathway	9729495.	IEP	Process
GO:0045500	sevenless signaling pathway	8157002.8722784.	IGI	Process
GO:0045500	sevenless signaling pathway	8124723.	IMP	Process
GO:0045793	positive regulation of cell size	19216764.	IMP	Process
GO:0046534	positive regulation of photoreceptor cell differentiation	16763554.	IMP	Process
GO:0046843	dorsal appendage formation	12963110.	IEP	Process
GO:0048010	vascular endothelial growth factor receptor signaling pathway	11595182.11955438.15457211.23878397.25130174.	IDA	Process
GO:0048010	vascular endothelial growth factor receptor signaling pathway	19216764.25749252.	IMP	Process
GO:0048149	behavioral response to ethanol	19464045.	IMP	Process
GO:0050804	modulation of chemical synaptic transmission	19144852.	IMP	Process
GO:0051091	positive regulation of DNA-binding transcription factor activity	8033205.	IDA	Process
GO:0051607	defense response to virus	23980175.	IMP	Process
GO:0070371	ERK1 and ERK2 cascade	24643257.	HGI	Process
GO:0070371	ERK1 and ERK2 cascade	8798773.11850406.	IDA	Process
GO:0070371	ERK1 and ERK2 cascade	10823906.28166211.	IGI	Process
GO:0071243	cellular response to arsenic-containing substance	16451733.	IDA	Process
GO:0071276	cellular response to cadmium ion	16451733.	IDA	Process
GO:0071310	cellular response to organic substance	21873635.	IBA	Process
GO:0090303	positive regulation of wound healing	22140578.	IMP	Process
GO:2000826	regulation of heart morphogenesis	25650441.	IGI	Process
GO:2001023	regulation of response to drug	22678283.	IMP	Process