EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0003278 (Gene tree)
Gene ID: 33210
Gene Symbol: RpI135
Alias: -
Full Name: RNA polymerase I 135kD subunit
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 3685 bases
Position: chr2L:404285-407969
Accession: FBgn0003278
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0077714	RNA_pol_Rpa2_4	PF06883.12	3.2e-18	1	1
FBpp0077714	RNA_pol_Rpb2_1	PF04563.15	9.6e-54	1	1
FBpp0077714	RNA_pol_Rpb2_2	PF04561.14	1.2e-44	1	1
FBpp0077714	RNA_pol_Rpb2_3	PF04565.16	1.4e-27	1	1
FBpp0077714	RNA_pol_Rpb2_7	PF04560.20	2.4e-24	1	1
FBpp0077714	RNA_pol_Rpb2_6	PF00562.28	2.3e-102	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0078054	-	3564	-	FBpp0077714	1129 (aa)	-	P20028

Gene Model

Click here to download FBgn0003278's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0003278's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0003278	RpI135	98	45.568	ENSG00000125630	POLR1B	97	52.405	Homo_sapiens
FBgn0003278	RpI135	98	45.674	ENSAPOG00000000931	polr1b	98	45.674	Acanthochromis_polyacanthus
FBgn0003278	RpI135	99	44.846	ENSAMEG00000010826	POLR1B	99	44.846	Ailuropoda_melanoleuca
FBgn0003278	RpI135	97	46.063	ENSACIG00000002290	polr1b	97	46.063	Amphilophus_citrinellus
FBgn0003278	RpI135	98	45.763	ENSAOCG00000004249	polr1b	98	45.763	Amphiprion_ocellaris
FBgn0003278	RpI135	98	45.674	ENSAPEG00000004971	polr1b	98	45.674	Amphiprion_percula
FBgn0003278	RpI135	97	46.679	ENSATEG00000010957	polr1b	98	46.679	Anabas_testudineus
FBgn0003278	RpI135	94	46.412	ENSAPLG00000004142	POLR1B	98	46.412	Anas_platyrhynchos
FBgn0003278	RpI135	50	39.115	ENSACAG00000005660	POLR1B	95	39.115	Anolis_carolinensis
FBgn0003278	RpI135	61	52.654	ENSACAG00000007117	-	100	52.654	Anolis_carolinensis
FBgn0003278	RpI135	98	45.528	ENSANAG00000026201	POLR1B	97	52.487	Aotus_nancymaae
FBgn0003278	RpI135	97	46.181	ENSACLG00000019089	polr1b	98	46.181	Astatotilapia_calliptera
FBgn0003278	RpI135	97	45.931	ENSAMXG00000037818	polr1b	97	45.931	Astyanax_mexicanus
FBgn0003278	RpI135	98	45.748	ENSBTAG00000014166	POLR1B	98	45.748	Bos_taurus
FBgn0003278	RpI135	97	42.589	WBGene00008781	rpoa-2	99	42.589	Caenorhabditis_elegans
FBgn0003278	RpI135	98	45.471	ENSCJAG00000016433	POLR1B	97	52.577	Callithrix_jacchus
FBgn0003278	RpI135	97	45.307	ENSCAFG00000007174	POLR1B	97	45.307	Canis_familiaris
FBgn0003278	RpI135	99	44.670	ENSCAFG00020017367	POLR1B	99	44.670	Canis_lupus_dingo
FBgn0003278	RpI135	99	45.737	ENSCHIG00000014527	POLR1B	98	45.737	Capra_hircus
FBgn0003278	RpI135	98	45.121	ENSTSYG00000003669	POLR1B	97	51.718	Carlito_syrichta
FBgn0003278	RpI135	81	53.704	ENSCAPG00000012821	POLR1B	79	53.704	Cavia_aperea
FBgn0003278	RpI135	98	46.064	ENSCPOG00000015744	POLR1B	98	46.064	Cavia_porcellus
FBgn0003278	RpI135	98	45.568	ENSCCAG00000035252	POLR1B	97	52.577	Cebus_capucinus
FBgn0003278	RpI135	93	33.580	ENSCATG00000035334	POLR3B	96	33.580	Cercocebus_atys
FBgn0003278	RpI135	98	45.561	ENSCATG00000037382	POLR1B	95	54.479	Cercocebus_atys
FBgn0003278	RpI135	98	46.243	ENSCLAG00000004899	POLR1B	98	46.243	Chinchilla_lanigera
FBgn0003278	RpI135	98	45.568	ENSCSAG00000016783	POLR1B	98	45.568	Chlorocebus_sabaeus
FBgn0003278	RpI135	85	46.865	ENSCHOG00000007229	POLR1B	99	46.865	Choloepus_hoffmanni
FBgn0003278	RpI135	95	47.043	ENSCPBG00000003962	POLR1B	95	56.438	Chrysemys_picta_bellii
FBgn0003278	RpI135	99	46.201	ENSCING00000003329	-	98	46.201	Ciona_intestinalis
FBgn0003278	RpI135	96	42.657	ENSCSAVG00000000129	-	89	42.657	Ciona_savignyi
FBgn0003278	RpI135	64	35.102	ENSCSAVG00000007982	-	92	31.315	Ciona_savignyi
FBgn0003278	RpI135	98	45.658	ENSCANG00000039531	POLR1B	97	52.062	Colobus_angolensis_palliatus
FBgn0003278	RpI135	98	45.406	ENSCGRG00001014254	Polr1b	98	45.406	Cricetulus_griseus_chok1gshd
FBgn0003278	RpI135	98	45.317	ENSCGRG00000017847	Polr1b	98	45.317	Cricetulus_griseus_crigri
FBgn0003278	RpI135	99	45.566	ENSCSEG00000008564	polr1b	99	45.566	Cynoglossus_semilaevis
FBgn0003278	RpI135	98	45.568	ENSCVAG00000005824	polr1b	98	45.568	Cyprinodon_variegatus
FBgn0003278	RpI135	99	44.982	ENSDARG00000077469	polr1b	99	44.982	Danio_rerio
FBgn0003278	RpI135	97	45.438	ENSDNOG00000017718	POLR1B	95	45.619	Dasypus_novemcinctus
FBgn0003278	RpI135	98	45.219	ENSDORG00000014309	Polr1b	98	45.219	Dipodomys_ordii
FBgn0003278	RpI135	86	49.876	ENSETEG00000004001	POLR1B	86	49.876	Echinops_telfairi
FBgn0003278	RpI135	74	35.238	ENSETEG00000011734	POLR2B	74	35.238	Echinops_telfairi
FBgn0003278	RpI135	63	51.361	ENSEBUG00000015791	polr1b	99	44.654	Eptatretus_burgeri
FBgn0003278	RpI135	90	40.891	ENSEASG00005021189	POLR3B	96	40.891	Equus_asinus_asinus
FBgn0003278	RpI135	99	45.616	ENSEASG00005006504	POLR1B	99	45.616	Equus_asinus_asinus
FBgn0003278	RpI135	99	45.704	ENSECAG00000010062	POLR1B	99	45.704	Equus_caballus
FBgn0003278	RpI135	61	38.614	ENSEEUG00000009798	POLR2B	61	38.614	Erinaceus_europaeus
FBgn0003278	RpI135	71	57.338	ENSEEUG00000004559	-	74	57.534	Erinaceus_europaeus
FBgn0003278	RpI135	98	45.583	ENSELUG00000019627	polr1b	99	45.583	Esox_lucius
FBgn0003278	RpI135	98	45.300	ENSFCAG00000008091	POLR1B	97	52.144	Felis_catus
FBgn0003278	RpI135	88	46.047	ENSFALG00000000717	POLR1B	99	46.047	Ficedula_albicollis
FBgn0003278	RpI135	98	45.699	ENSFDAG00000020976	POLR1B	98	45.699	Fukomys_damarensis
FBgn0003278	RpI135	76	41.328	ENSFHEG00000008215	polr3b	77	41.328	Fundulus_heteroclitus
FBgn0003278	RpI135	83	52.393	ENSFHEG00000000533	polr1b	89	52.393	Fundulus_heteroclitus
FBgn0003278	RpI135	90	43.853	ENSGMOG00000005847	polr1b	98	43.853	Gadus_morhua
FBgn0003278	RpI135	95	44.954	ENSGALG00000032273	POLR1B	97	44.954	Gallus_gallus
FBgn0003278	RpI135	98	45.349	ENSGAFG00000001383	polr1b	98	45.349	Gambusia_affinis
FBgn0003278	RpI135	99	45.238	ENSGACG00000003012	polr1b	99	45.238	Gasterosteus_aculeatus
FBgn0003278	RpI135	96	46.432	ENSGAGG00000016312	POLR1B	100	47.904	Gopherus_agassizii
FBgn0003278	RpI135	98	45.568	ENSGGOG00000013494	POLR1B	97	52.405	Gorilla_gorilla
FBgn0003278	RpI135	97	46.181	ENSHBUG00000012650	polr1b	98	46.181	Haplochromis_burtoni
FBgn0003278	RpI135	99	46.011	ENSHGLG00000011497	POLR1B	98	46.011	Heterocephalus_glaber_female
FBgn0003278	RpI135	99	45.833	ENSHGLG00100009371	POLR1B	98	45.833	Heterocephalus_glaber_male
FBgn0003278	RpI135	96	44.909	ENSHCOG00000000709	polr1b	96	44.959	Hippocampus_comes
FBgn0003278	RpI135	98	45.455	ENSIPUG00000018216	polr1b	98	45.455	Ictalurus_punctatus
FBgn0003278	RpI135	95	46.260	ENSSTOG00000008160	POLR1B	99	46.260	Ictidomys_tridecemlineatus
FBgn0003278	RpI135	90	55.947	ENSJJAG00000000143	Polr1b	92	55.947	Jaculus_jaculus
FBgn0003278	RpI135	85	35.634	ENSJJAG00000016101	Polr2b	91	35.634	Jaculus_jaculus
FBgn0003278	RpI135	97	45.709	ENSKMAG00000016037	polr1b	97	45.709	Kryptolebias_marmoratus
FBgn0003278	RpI135	99	44.170	ENSLBEG00000027396	polr1b	99	44.258	Labrus_bergylta
FBgn0003278	RpI135	99	45.463	ENSLACG00000009481	POLR1B	99	45.463	Latimeria_chalumnae
FBgn0003278	RpI135	99	45.671	ENSLOCG00000016558	polr1b	99	45.671	Lepisosteus_oculatus
FBgn0003278	RpI135	97	45.487	ENSLAFG00000007659	POLR1B	96	52.055	Loxodonta_africana
FBgn0003278	RpI135	88	33.287	ENSMFAG00000038425	POLR3B	93	33.287	Macaca_fascicularis
FBgn0003278	RpI135	98	45.658	ENSMFAG00000032912	POLR1B	97	52.405	Macaca_fascicularis
FBgn0003278	RpI135	98	45.658	ENSMMUG00000009468	POLR1B	97	52.405	Macaca_mulatta
FBgn0003278	RpI135	98	45.568	ENSMNEG00000036047	POLR1B	97	52.234	Macaca_nemestrina
FBgn0003278	RpI135	89	47.312	ENSMLEG00000030588	POLR1B	97	52.405	Mandrillus_leucophaeus
FBgn0003278	RpI135	97	46.278	ENSMAMG00000013118	polr1b	98	46.278	Mastacembelus_armatus
FBgn0003278	RpI135	97	46.181	ENSMZEG00005011850	polr1b	98	46.181	Maylandia_zebra
FBgn0003278	RpI135	91	45.654	ENSMGAG00000007074	POLR1B	99	45.654	Meleagris_gallopavo
FBgn0003278	RpI135	83	47.182	ENSMAUG00000010593	Polr1b	94	47.182	Mesocricetus_auratus
FBgn0003278	RpI135	97	45.307	ENSMICG00000013245	POLR1B	97	45.307	Microcebus_murinus
FBgn0003278	RpI135	98	45.414	ENSMOCG00000005942	Polr1b	98	45.414	Microtus_ochrogaster
FBgn0003278	RpI135	97	46.320	ENSMMOG00000008388	polr1b	98	46.320	Mola_mola
FBgn0003278	RpI135	98	45.147	ENSMODG00000006573	POLR1B	98	45.147	Monodelphis_domestica
FBgn0003278	RpI135	97	45.291	ENSMALG00000008958	polr1b	97	45.291	Monopterus_albus
FBgn0003278	RpI135	95	45.883	MGP_CAROLIEiJ_G0024281	Polr1b	99	45.883	Mus_caroli
FBgn0003278	RpI135	98	45.227	ENSMUSG00000027395	Polr1b	98	45.227	Mus_musculus
FBgn0003278	RpI135	98	45.584	MGP_PahariEiJ_G0025726	Polr1b	98	45.584	Mus_pahari
FBgn0003278	RpI135	98	45.495	MGP_SPRETEiJ_G0025201	Polr1b	98	45.495	Mus_spretus
FBgn0003278	RpI135	99	42.832	ENSMPUG00000009644	POLR1B	99	42.832	Mustela_putorius_furo
FBgn0003278	RpI135	98	45.389	ENSMLUG00000004910	POLR1B	98	45.389	Myotis_lucifugus
FBgn0003278	RpI135	88	57.048	ENSNGAG00000021472	Polr1b	90	57.048	Nannospalax_galili
FBgn0003278	RpI135	97	46.002	ENSNBRG00000017979	polr1b	98	46.002	Neolamprologus_brichardi
FBgn0003278	RpI135	98	44.604	ENSNLEG00000001656	POLR1B	97	52.234	Nomascus_leucogenys
FBgn0003278	RpI135	59	30.387	ENSMEUG00000002576	POLR3B	61	30.387	Notamacropus_eugenii
FBgn0003278	RpI135	69	57.143	ENSMEUG00000013915	POLR1B	70	57.143	Notamacropus_eugenii
FBgn0003278	RpI135	81	36.888	ENSOPRG00000008568	POLR3B	80	36.888	Ochotona_princeps
FBgn0003278	RpI135	97	45.931	ENSOPRG00000012742	POLR1B	97	45.931	Ochotona_princeps
FBgn0003278	RpI135	98	43.087	ENSODEG00000005501	POLR1B	98	43.087	Octodon_degus
FBgn0003278	RpI135	97	46.271	ENSONIG00000010382	polr1b	98	46.271	Oreochromis_niloticus
FBgn0003278	RpI135	92	45.498	ENSOANG00000003621	POLR1B	99	45.498	Ornithorhynchus_anatinus
FBgn0003278	RpI135	98	45.389	ENSOCUG00000006058	POLR1B	98	45.389	Oryctolagus_cuniculus
FBgn0003278	RpI135	98	45.658	ENSORLG00000000890	polr1b	98	45.658	Oryzias_latipes
FBgn0003278	RpI135	98	45.658	ENSORLG00015011105	polr1b	98	45.658	Oryzias_latipes_hsok
FBgn0003278	RpI135	98	45.658	ENSOMEG00000005073	polr1b	98	45.658	Oryzias_melastigma
FBgn0003278	RpI135	98	44.933	ENSOGAG00000007367	POLR1B	95	44.933	Otolemur_garnettii
FBgn0003278	RpI135	98	45.796	ENSOARG00000020904	POLR1B	97	45.796	Ovis_aries
FBgn0003278	RpI135	98	45.568	ENSPPAG00000002774	POLR1B	97	52.405	Pan_paniscus
FBgn0003278	RpI135	98	45.210	ENSPPRG00000005760	POLR1B	97	52.144	Panthera_pardus
FBgn0003278	RpI135	98	45.446	ENSPTIG00000013496	POLR1B	97	52.144	Panthera_tigris_altaica
FBgn0003278	RpI135	98	45.568	ENSPTRG00000012366	POLR1B	97	52.405	Pan_troglodytes
FBgn0003278	RpI135	98	45.658	ENSPANG00000023423	POLR1B	97	52.405	Papio_anubis
FBgn0003278	RpI135	98	44.133	ENSPKIG00000007536	polr1b	99	44.133	Paramormyrops_kingsleyae
FBgn0003278	RpI135	95	37.647	ENSPKIG00000000008	polr2b	90	37.647	Paramormyrops_kingsleyae
FBgn0003278	RpI135	96	46.042	ENSPSIG00000002443	POLR1B	99	46.330	Pelodiscus_sinensis
FBgn0003278	RpI135	99	45.013	ENSPMGG00000021622	polr1b	99	45.013	Periophthalmus_magnuspinnatus
FBgn0003278	RpI135	98	45.138	ENSPEMG00000008619	Polr1b	98	45.138	Peromyscus_maniculatus_bairdii
FBgn0003278	RpI135	71	30.184	ENSPMAG00000001164	-	95	30.184	Petromyzon_marinus
FBgn0003278	RpI135	98	45.227	ENSPCIG00000029738	POLR1B	93	45.227	Phascolarctos_cinereus
FBgn0003278	RpI135	98	45.446	ENSPFOG00000010484	polr1b	98	45.446	Poecilia_formosa
FBgn0003278	RpI135	98	45.349	ENSPLAG00000007518	polr1b	98	45.349	Poecilia_latipinna
FBgn0003278	RpI135	98	45.528	ENSPMEG00000006810	polr1b	98	45.528	Poecilia_mexicana
FBgn0003278	RpI135	98	45.259	ENSPREG00000002867	polr1b	98	45.259	Poecilia_reticulata
FBgn0003278	RpI135	98	45.389	ENSPPYG00000012168	POLR1B	98	45.389	Pongo_abelii
FBgn0003278	RpI135	97	41.230	ENSPCAG00000013293	POLR1B	97	41.230	Procavia_capensis
FBgn0003278	RpI135	70	43.200	ENSPCAG00000000881	POLR3B	71	43.200	Procavia_capensis
FBgn0003278	RpI135	98	44.673	ENSPCOG00000015852	POLR1B	94	46.341	Propithecus_coquereli
FBgn0003278	RpI135	55	33.580	ENSPCOG00000014476	POLR3B	63	33.580	Propithecus_coquereli
FBgn0003278	RpI135	78	36.493	ENSPVAG00000010951	POLR2B	76	36.493	Pteropus_vampyrus
FBgn0003278	RpI135	87	43.404	ENSPVAG00000005727	POLR1B	87	43.404	Pteropus_vampyrus
FBgn0003278	RpI135	97	46.181	ENSPNYG00000004767	polr1b	98	46.181	Pundamilia_nyererei
FBgn0003278	RpI135	96	45.413	ENSPNAG00000013503	polr1b	91	45.413	Pygocentrus_nattereri
FBgn0003278	RpI135	98	43.551	ENSRNOG00000018349	Polr1b	98	43.551	Rattus_norvegicus
FBgn0003278	RpI135	98	45.479	ENSRBIG00000019757	POLR1B	97	52.405	Rhinopithecus_bieti
FBgn0003278	RpI135	94	42.692	YPR010C	RPA135	92	42.692	Saccharomyces_cerevisiae
FBgn0003278	RpI135	98	45.568	ENSSBOG00000024562	POLR1B	97	52.405	Saimiri_boliviensis_boliviensis
FBgn0003278	RpI135	98	43.866	ENSSFOG00015004632	polr1b	98	43.866	Scleropages_formosus
FBgn0003278	RpI135	99	45.471	ENSSMAG00000013682	polr1b	99	45.471	Scophthalmus_maximus
FBgn0003278	RpI135	97	46.271	ENSSDUG00000019471	polr1b	98	46.271	Seriola_dumerili
FBgn0003278	RpI135	81	47.363	ENSSPUG00000014298	POLR1B	99	47.363	Sphenodon_punctatus
FBgn0003278	RpI135	97	46.112	ENSSPAG00000006345	polr1b	97	46.112	Stegastes_partitus
FBgn0003278	RpI135	98	46.195	ENSSSCG00000008098	POLR1B	90	53.000	Sus_scrofa
FBgn0003278	RpI135	91	45.969	ENSTGUG00000005237	POLR1B	99	45.969	Taeniopygia_guttata
FBgn0003278	RpI135	97	46.119	ENSTRUG00000006581	polr1b	97	46.119	Takifugu_rubripes
FBgn0003278	RpI135	99	45.560	ENSTNIG00000002722	polr1b	98	45.560	Tetraodon_nigroviridis
FBgn0003278	RpI135	71	41.912	ENSTBEG00000017278	POLR3B	69	41.912	Tupaia_belangeri
FBgn0003278	RpI135	83	33.425	ENSTTRG00000010682	POLR3B	83	33.425	Tursiops_truncatus
FBgn0003278	RpI135	97	45.578	ENSTTRG00000010988	POLR1B	97	45.578	Tursiops_truncatus
FBgn0003278	RpI135	95	45.538	ENSUAMG00000022527	-	99	45.538	Ursus_americanus
FBgn0003278	RpI135	55	33.531	ENSUAMG00000024267	POLR3B	94	34.345	Ursus_americanus
FBgn0003278	RpI135	99	44.797	ENSUMAG00000008619	POLR1B	99	46.449	Ursus_maritimus
FBgn0003278	RpI135	91	43.688	ENSVPAG00000011111	POLR1B	91	43.688	Vicugna_pacos
FBgn0003278	RpI135	81	40.667	ENSVPAG00000010478	POLR3B	82	40.667	Vicugna_pacos
FBgn0003278	RpI135	88	33.425	ENSVVUG00000023101	POLR3B	93	33.425	Vulpes_vulpes
FBgn0003278	RpI135	99	44.758	ENSVVUG00000028670	POLR1B	99	44.758	Vulpes_vulpes
FBgn0003278	RpI135	97	44.224	ENSXETG00000013749	polr1b	97	44.314	Xenopus_tropicalis
FBgn0003278	RpI135	98	45.755	ENSXCOG00000006080	polr1b	98	45.755	Xiphophorus_couchianus
FBgn0003278	RpI135	98	45.398	ENSXMAG00000007723	polr1b	98	45.398	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001054	RNA polymerase I activity	21873635.	IBA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	21873635.	IBA	Function
GO:0005736	RNA polymerase I complex	21873635.	IBA	Component
GO:0006351	transcription, DNA-templated	-	IEA	Process
GO:0032549	ribonucleoside binding	-	IEA	Function
GO:0045793	positive regulation of cell size	25858587.	IMP	Process