EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0003346 (Gene tree)
Gene ID: 35223
Gene Symbol: RanGAP
Alias: -
Full Name: Ran GTPase activating protein
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 5359
Position: chr2L: 19441959-19447317
Accession: FBgn0003346
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0334175	-	2144	-	FBpp0306292	588 (aa)	-	M9PD65
FBtr0334174	-	2008	-	FBpp0306291	596 (aa)	-	Q9VIW3
FBtr0081234	-	2401	-	FBpp0080775	596 (aa)	-	Q9VIW3

Gene Model

Click here to download FBgn0003346's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0003346's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0003346	RanGAP	57	44.575	ENSG00000100401	RANGAP1	100	45.113	Homo_sapiens
FBgn0003346	RanGAP	59	44.633	ENSMUSG00000022391	Rangap1	100	47.860	Mus_musculus
FBgn0003346	RanGAP	56	31.105	YMR235C		91	30.990	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	26308891.	IDA	Function
GO:0005096	GTPase activator activity	11702947.	IDA	Function
GO:0005515	protein binding	14729961.	IPI	Function
GO:0006611	protein export from nucleus	11702947.	IMP	Process
GO:0006913	nucleocytoplasmic transport	11702947.	IMP	Process
GO:0006913	nucleocytoplasmic transport	12539236.	NAS	Process
GO:0007165	signal transduction	-	IEA	Process
GO:0043547	positive regulation of GTPase activity	11702947.	IDA	Process
GO:0045132	meiotic chromosome segregation	12539236.	TAS	Process
GO:0048471	perinuclear region of cytoplasm	11702947.26308891.	IDA	Component