EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0003464 (Gene tree)
Gene ID: 44014
Gene Symbol: sol
Alias: -
Full Name: small optic lobes
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 7633 bases
Position: chrX:21350280-21357912
Accession: FBgn0003464
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0290798	zf-RanBP	PF00641.18	5.2e-49	1	6
FBpp0290798	zf-RanBP	PF00641.18	5.2e-49	2	6
FBpp0290798	zf-RanBP	PF00641.18	5.2e-49	3	6
FBpp0290798	zf-RanBP	PF00641.18	5.2e-49	4	6
FBpp0290798	zf-RanBP	PF00641.18	5.2e-49	5	6
FBpp0290798	zf-RanBP	PF00641.18	5.2e-49	6	6
FBpp0088620	zf-RanBP	PF00641.18	5.3e-49	1	6
FBpp0088620	zf-RanBP	PF00641.18	5.3e-49	2	6
FBpp0088620	zf-RanBP	PF00641.18	5.3e-49	3	6
FBpp0088620	zf-RanBP	PF00641.18	5.3e-49	4	6
FBpp0088620	zf-RanBP	PF00641.18	5.3e-49	5	6
FBpp0088620	zf-RanBP	PF00641.18	5.3e-49	6	6
FBpp0312188	zf-RanBP	PF00641.18	3.5e-41	1	5
FBpp0312188	zf-RanBP	PF00641.18	3.5e-41	2	5
FBpp0312188	zf-RanBP	PF00641.18	3.5e-41	3	5
FBpp0312188	zf-RanBP	PF00641.18	3.5e-41	4	5
FBpp0312188	zf-RanBP	PF00641.18	3.5e-41	5	5
FBpp0088621	zf-RanBP	PF00641.18	4.3e-16	1	2
FBpp0088621	zf-RanBP	PF00641.18	4.3e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0089679	-	4990	-	FBpp0088621	395 (aa)	-	P27398-2
FBtr0089678	-	5592	-	FBpp0088620	1594 (aa)	-	P27398
FBtr0346608	-	5153	-	FBpp0312188	1515 (aa)	-	UPI000436DF8C
FBtr0301583	-	5589	-	FBpp0290798	1593 (aa)	-	E1JJ98

Gene Model

Click here to download FBgn0003464's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0003464's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0003464	sol	59	45.923	ENSAPOG00000009336	-	89	45.923	Acanthochromis_polyacanthus
FBgn0003464	sol	62	54.215	ENSAMEG00000007136	CAPN15	63	54.360	Ailuropoda_melanoleuca
FBgn0003464	sol	58	44.654	ENSACIG00000019745	-	95	44.339	Amphilophus_citrinellus
FBgn0003464	sol	59	45.620	ENSAOCG00000000694	-	89	45.620	Amphiprion_ocellaris
FBgn0003464	sol	59	45.775	ENSAPEG00000006148	-	95	45.891	Amphiprion_percula
FBgn0003464	sol	59	45.856	ENSACLG00000017501	CAPN15	66	54.277	Astatotilapia_calliptera
FBgn0003464	sol	50	55.043	ENSACLG00000009847	capn15	62	55.267	Astatotilapia_calliptera
FBgn0003464	sol	62	43.676	ENSAMXG00000035785	capn15	71	55.182	Astyanax_mexicanus
FBgn0003464	sol	58	42.871	ENSELUG00000009318	-	63	53.226	Esox_lucius
FBgn0003464	sol	50	55.187	ENSGAFG00000015596	capn15	63	55.172	Gambusia_affinis
FBgn0003464	sol	59	45.640	ENSHBUG00000013774	CAPN15	67	53.982	Haplochromis_burtoni
FBgn0003464	sol	59	44.109	ENSIPUG00000005430	capn15	97	43.898	Ictalurus_punctatus
FBgn0003464	sol	50	55.043	ENSKMAG00000013861	capn15	61	55.766	Kryptolebias_marmoratus
FBgn0003464	sol	57	42.811	ENSKMAG00000003941	-	64	52.970	Kryptolebias_marmoratus
FBgn0003464	sol	56	42.668	ENSLBEG00000013098	-	88	44.222	Labrus_bergylta
FBgn0003464	sol	56	43.668	ENSLOCG00000009003	capn15	76	50.360	Lepisosteus_oculatus
FBgn0003464	sol	62	43.788	ENSMAMG00000018965	-	70	54.963	Mastacembelus_armatus
FBgn0003464	sol	59	44.526	ENSMZEG00005001529	CAPN15	96	43.375	Maylandia_zebra
FBgn0003464	sol	62	42.774	ENSMGAG00000010138	CAPN15	99	42.570	Meleagris_gallopavo
FBgn0003464	sol	53	59.542	ENSMMOG00000020118	-	85	59.542	Mola_mola
FBgn0003464	sol	59	44.572	ENSMALG00000015062	-	97	44.235	Monopterus_albus
FBgn0003464	sol	59	45.322	ENSMALG00000000396	capn15	59	54.950	Monopterus_albus
FBgn0003464	sol	52	49.861	ENSNBRG00000020996	-	93	48.649	Neolamprologus_brichardi
FBgn0003464	sol	59	45.205	ENSONIG00000009415	CAPN15	95	44.784	Oreochromis_niloticus
FBgn0003464	sol	59	45.092	ENSORLG00000000290	-	92	44.276	Oryzias_latipes
FBgn0003464	sol	51	53.631	ENSORLG00000007128	capn15	63	55.137	Oryzias_latipes
FBgn0003464	sol	59	45.092	ENSORLG00020019012	-	89	44.168	Oryzias_latipes_hni
FBgn0003464	sol	59	45.307	ENSORLG00015010025	-	90	44.492	Oryzias_latipes_hsok
FBgn0003464	sol	58	45.005	ENSOMEG00000013895	-	67	54.142	Oryzias_melastigma
FBgn0003464	sol	58	45.034	ENSPMAG00000004340	capn15	88	45.475	Petromyzon_marinus
FBgn0003464	sol	50	55.316	ENSPFOG00000017205	capn15	62	55.331	Poecilia_formosa
FBgn0003464	sol	50	55.316	ENSPLAG00000021084	capn15	62	55.476	Poecilia_latipinna
FBgn0003464	sol	50	55.316	ENSPMEG00000017000	capn15	62	55.476	Poecilia_mexicana
FBgn0003464	sol	59	45.659	ENSPNYG00000012833	-	96	44.573	Pundamilia_nyererei
FBgn0003464	sol	62	43.452	ENSSFOG00015009309	-	95	44.127	Scleropages_formosus
FBgn0003464	sol	50	54.427	ENSSFOG00015018233	capn15	63	54.572	Scleropages_formosus
FBgn0003464	sol	63	43.054	ENSSDUG00000000928	-	93	44.900	Seriola_dumerili
FBgn0003464	sol	59	44.726	ENSSLDG00000021217	-	99	44.802	Seriola_lalandi_dorsalis
FBgn0003464	sol	59	45.923	ENSSPAG00000006662	-	71	53.869	Stegastes_partitus
FBgn0003464	sol	59	42.977	ENSTNIG00000004278	-	72	51.320	Tetraodon_nigroviridis
FBgn0003464	sol	63	44.028	ENSXETG00000010331	capn15	99	43.281	Xenopus_tropicalis
FBgn0003464	sol	50	54.688	ENSXMAG00000019044	capn15	59	55.476	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004198	calcium-dependent cysteine-type endopeptidase activity	21873635.	IBA	Function
GO:0004198	calcium-dependent cysteine-type endopeptidase activity	-	ISS	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	15382138.	NAS	Component
GO:0006508	proteolysis	21873635.	IBA	Process
GO:0006508	proteolysis	-	ISS	Process
GO:0007399	nervous system development	1714593.	IMP	Process