EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0003638 (Gene tree)
Gene ID: 31054
Gene Symbol: su(w[a])
Alias: -
Full Name: suppressor of white-apricot
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 33262 bases
Position: chrX:1012779-1046040
Accession: FBgn0003638
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0070171	DRY_EERY	PF09750.9	9e-29	1	1
FBpp0307668	DRY_EERY	PF09750.9	5.8e-27	1	1
FBpp0296932	DRY_EERY	PF09750.9	8.9e-27	1	1
FBpp0296931	DRY_EERY	PF09750.9	1.2e-26	1	1
FBpp0089322	DRY_EERY	PF09750.9	1.1e-11	1	1
FBpp0089323	DRY_EERY	PF09750.9	1.1e-11	1	1
FBpp0292012	Surp	PF01805.20	1e-28	1	2
FBpp0292012	Surp	PF01805.20	1e-28	2	2
FBpp0070171	Surp	PF01805.20	1.9e-28	1	2
FBpp0070171	Surp	PF01805.20	1.9e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0070178	-	4836	-	FBpp0089323	176 (aa)	-	A4V3U2
FBtr0070176	-	3199	-	FBpp0070171	963 (aa)	-	P12297
FBtr0305652	-	3609	-	FBpp0296932	186 (aa)	-	M9NFQ2
FBtr0070177	-	4056	-	FBpp0089322	176 (aa)	-	A4V3U2
FBtr0305651	-	3478	-	FBpp0296931	217 (aa)	-	M9NDH9
FBtr0302884	-	4288	-	FBpp0292012	748 (aa)	-	M9MS02
FBtr0336687	-	3355	-	FBpp0307668	160 (aa)	-	M9PDF8

Gene Model

Click here to download FBgn0003638's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0003638's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0003638	su(w[a])	56	55.556	ENSG00000061936	SFSWAP	68	56.627	Homo_sapiens
FBgn0003638	su(w[a])	59	35.789	ENSG00000104859	CLASRP	60	40.385	Homo_sapiens
FBgn0003638	su(w[a])	56	54.444	ENSAMEG00000013818	SFSWAP	52	45.763	Ailuropoda_melanoleuca
FBgn0003638	su(w[a])	59	55.208	ENSACIG00000009240	-	74	54.082	Amphilophus_citrinellus
FBgn0003638	su(w[a])	56	56.667	ENSAPLG00000013808	SFSWAP	52	47.479	Anas_platyrhynchos
FBgn0003638	su(w[a])	56	55.556	ENSANAG00000001518	SFSWAP	50	47.034	Aotus_nancymaae
FBgn0003638	su(w[a])	56	57.303	ENSACLG00000020159	sfswap	69	32.475	Astatotilapia_calliptera
FBgn0003638	su(w[a])	58	59.783	ENSAMXG00000008657	sfswap	51	46.565	Astyanax_mexicanus
FBgn0003638	su(w[a])	56	55.556	ENSBTAG00000000439	SFSWAP	54	46.186	Bos_taurus
FBgn0003638	su(w[a])	56	55.556	ENSCJAG00000003613	SFSWAP	53	46.610	Callithrix_jacchus
FBgn0003638	su(w[a])	56	54.444	ENSCAFG00000006625	SFSWAP	51	46.186	Canis_familiaris
FBgn0003638	su(w[a])	59	35.789	ENSCAFG00020012303	-	59	34.167	Canis_lupus_dingo
FBgn0003638	su(w[a])	56	55.556	ENSCHIG00000008838	SFSWAP	51	46.186	Capra_hircus
FBgn0003638	su(w[a])	56	54.444	ENSTSYG00000010303	SFSWAP	54	42.857	Carlito_syrichta
FBgn0003638	su(w[a])	56	55.556	ENSCPOG00000005280	SFSWAP	54	43.636	Cavia_porcellus
FBgn0003638	su(w[a])	56	55.556	ENSCCAG00000037255	SFSWAP	50	46.610	Cebus_capucinus
FBgn0003638	su(w[a])	56	55.556	ENSCATG00000031094	SFSWAP	51	47.034	Cercocebus_atys
FBgn0003638	su(w[a])	56	55.556	ENSCLAG00000008380	SFSWAP	51	46.610	Chinchilla_lanigera
FBgn0003638	su(w[a])	56	55.556	ENSCSAG00000001884	SFSWAP	51	47.034	Chlorocebus_sabaeus
FBgn0003638	su(w[a])	56	55.556	ENSCPBG00000024757	SFSWAP	62	36.316	Chrysemys_picta_bellii
FBgn0003638	su(w[a])	56	55.556	ENSCANG00000036501	SFSWAP	51	46.610	Colobus_angolensis_palliatus
FBgn0003638	su(w[a])	56	55.556	ENSCGRG00001011284	Sfswap	51	46.610	Cricetulus_griseus_chok1gshd
FBgn0003638	su(w[a])	56	55.556	ENSCGRG00000017417	Sfswap	51	46.610	Cricetulus_griseus_crigri
FBgn0003638	su(w[a])	51	57.317	ENSCVAG00000001208	-	70	57.317	Cyprinodon_variegatus
FBgn0003638	su(w[a])	56	58.427	ENSDARG00000005980	sfswap	52	47.843	Danio_rerio
FBgn0003638	su(w[a])	56	55.556	ENSDORG00000010352	Sfswap	54	36.777	Dipodomys_ordii
FBgn0003638	su(w[a])	56	54.444	ENSEASG00005016502	SFSWAP	51	46.186	Equus_asinus_asinus
FBgn0003638	su(w[a])	56	54.444	ENSECAG00000007657	SFSWAP	51	46.186	Equus_caballus
FBgn0003638	su(w[a])	56	59.551	ENSELUG00000010942	sfswap	67	49.145	Esox_lucius
FBgn0003638	su(w[a])	61	52.041	ENSFCAG00000010778	SFSWAP	51	46.186	Felis_catus
FBgn0003638	su(w[a])	56	55.556	ENSFDAG00000017235	SFSWAP	50	47.034	Fukomys_damarensis
FBgn0003638	su(w[a])	59	57.292	ENSFHEG00000011149	-	61	46.087	Fundulus_heteroclitus
FBgn0003638	su(w[a])	56	56.667	ENSGALG00000002487	SFSWAP	58	41.060	Gallus_gallus
FBgn0003638	su(w[a])	56	57.303	ENSGAFG00000006272	sfswap	50	48.276	Gambusia_affinis
FBgn0003638	su(w[a])	56	53.933	ENSGACG00000017647	sfswap	56	45.570	Gasterosteus_aculeatus
FBgn0003638	su(w[a])	56	55.556	ENSGAGG00000002611	SFSWAP	62	36.316	Gopherus_agassizii
FBgn0003638	su(w[a])	56	55.556	ENSGGOG00000014877	SFSWAP	70	31.161	Gorilla_gorilla
FBgn0003638	su(w[a])	56	57.303	ENSHBUG00000005629	sfswap	60	39.394	Haplochromis_burtoni
FBgn0003638	su(w[a])	56	55.556	ENSHGLG00000019216	SFSWAP	51	47.034	Heterocephalus_glaber_female
FBgn0003638	su(w[a])	56	56.180	ENSHGLG00100019350	SFSWAP	50	46.809	Heterocephalus_glaber_male
FBgn0003638	su(w[a])	56	58.427	ENSIPUG00000010598	sfswap	57	45.914	Ictalurus_punctatus
FBgn0003638	su(w[a])	56	56.667	ENSSTOG00000000773	SFSWAP	51	47.458	Ictidomys_tridecemlineatus
FBgn0003638	su(w[a])	56	55.556	ENSJJAG00000006609	Sfswap	60	38.438	Jaculus_jaculus
FBgn0003638	su(w[a])	83	47.761	ENSLACG00000018678	SFSWAP	60	38.701	Latimeria_chalumnae
FBgn0003638	su(w[a])	56	55.556	ENSMFAG00000037352	SFSWAP	61	31.020	Macaca_fascicularis
FBgn0003638	su(w[a])	56	55.556	ENSMLEG00000035728	SFSWAP	50	44.397	Mandrillus_leucophaeus
FBgn0003638	su(w[a])	53	59.524	ENSMZEG00005009699	-	69	59.524	Maylandia_zebra
FBgn0003638	su(w[a])	56	57.303	ENSMZEG00005017834	SFSWAP	51	47.009	Maylandia_zebra
FBgn0003638	su(w[a])	56	56.667	ENSMGAG00000002191	SFSWAP	58	37.644	Meleagris_gallopavo
FBgn0003638	su(w[a])	56	54.444	ENSMICG00000004465	SFSWAP	50	45.763	Microcebus_murinus
FBgn0003638	su(w[a])	56	55.556	ENSMOCG00000014390	Sfswap	51	46.610	Microtus_ochrogaster
FBgn0003638	su(w[a])	56	41.573	ENSMMOG00000021053	-	71	39.474	Mola_mola
FBgn0003638	su(w[a])	56	54.444	ENSMODG00000015581	SFSWAP	55	41.935	Monodelphis_domestica
FBgn0003638	su(w[a])	56	56.180	ENSMALG00000012603	sfswap	50	47.436	Monopterus_albus
FBgn0003638	su(w[a])	56	55.556	MGP_CAROLIEiJ_G0027780	Sfswap	68	56.627	Mus_caroli
FBgn0003638	su(w[a])	56	55.556	ENSMUSG00000029439	Sfswap	68	56.627	Mus_musculus
FBgn0003638	su(w[a])	56	55.556	MGP_PahariEiJ_G0024360	Sfswap	68	56.627	Mus_pahari
FBgn0003638	su(w[a])	56	55.556	MGP_SPRETEiJ_G0028779	Sfswap	68	56.627	Mus_spretus
FBgn0003638	su(w[a])	56	54.444	ENSMPUG00000002218	SFSWAP	60	39.521	Mustela_putorius_furo
FBgn0003638	su(w[a])	56	55.556	ENSMLUG00000011296	SFSWAP	54	46.414	Myotis_lucifugus
FBgn0003638	su(w[a])	56	55.556	ENSNGAG00000018167	Sfswap	51	46.610	Nannospalax_galili
FBgn0003638	su(w[a])	56	55.556	ENSNLEG00000008386	SFSWAP	71	30.014	Nomascus_leucogenys
FBgn0003638	su(w[a])	56	55.556	ENSODEG00000008020	SFSWAP	52	44.922	Octodon_degus
FBgn0003638	su(w[a])	56	57.303	ENSONIG00000003757	sfswap	65	32.779	Oreochromis_niloticus
FBgn0003638	su(w[a])	56	55.556	ENSOCUG00000002165	SFSWAP	51	45.490	Oryctolagus_cuniculus
FBgn0003638	su(w[a])	56	54.444	ENSOGAG00000016724	SFSWAP	56	46.186	Otolemur_garnettii
FBgn0003638	su(w[a])	56	55.556	ENSOARG00000014314	SFSWAP	51	46.186	Ovis_aries
FBgn0003638	su(w[a])	56	55.556	ENSPPAG00000036706	SFSWAP	72	31.117	Pan_paniscus
FBgn0003638	su(w[a])	61	52.041	ENSPTIG00000004304	SFSWAP	71	30.580	Panthera_tigris_altaica
FBgn0003638	su(w[a])	56	55.556	ENSPTRG00000005640	SFSWAP	72	31.117	Pan_troglodytes
FBgn0003638	su(w[a])	56	55.556	ENSPANG00000019737	SFSWAP	51	47.034	Papio_anubis
FBgn0003638	su(w[a])	56	57.303	ENSPKIG00000008327	sfswap	53	44.944	Paramormyrops_kingsleyae
FBgn0003638	su(w[a])	51	59.756	ENSPMGG00000008093	-	69	59.756	Periophthalmus_magnuspinnatus
FBgn0003638	su(w[a])	56	55.556	ENSPEMG00000001237	Sfswap	51	47.034	Peromyscus_maniculatus_bairdii
FBgn0003638	su(w[a])	59	56.250	ENSPMAG00000008279	sfswap	59	43.284	Petromyzon_marinus
FBgn0003638	su(w[a])	56	54.444	ENSPCIG00000006062	SFSWAP	57	43.509	Phascolarctos_cinereus
FBgn0003638	su(w[a])	56	55.556	ENSPPYG00000005129	SFSWAP	51	46.610	Pongo_abelii
FBgn0003638	su(w[a])	56	54.444	ENSPCOG00000023786	SFSWAP	51	46.186	Propithecus_coquereli
FBgn0003638	su(w[a])	58	58.696	ENSPNAG00000007073	sfswap	51	46.565	Pygocentrus_nattereri
FBgn0003638	su(w[a])	56	55.556	ENSRNOG00000000931	Sfswap	52	43.893	Rattus_norvegicus
FBgn0003638	su(w[a])	56	55.556	ENSRROG00000032001	SFSWAP	51	47.034	Rhinopithecus_roxellana
FBgn0003638	su(w[a])	56	55.556	ENSSBOG00000026217	SFSWAP	50	46.610	Saimiri_boliviensis_boliviensis
FBgn0003638	su(w[a])	56	55.556	ENSSSCG00000009744	SFSWAP	51	46.186	Sus_scrofa
FBgn0003638	su(w[a])	56	56.667	ENSTGUG00000004623	SFSWAP	60	39.623	Taeniopygia_guttata
FBgn0003638	su(w[a])	56	55.056	ENSTNIG00000006156	-	80	38.224	Tetraodon_nigroviridis
FBgn0003638	su(w[a])	56	54.444	ENSUAMG00000016807	SFSWAP	61	38.690	Ursus_americanus
FBgn0003638	su(w[a])	56	54.444	ENSUMAG00000002957	SFSWAP	56	46.186	Ursus_maritimus
FBgn0003638	su(w[a])	56	54.444	ENSVVUG00000010753	SFSWAP	54	43.116	Vulpes_vulpes
FBgn0003638	su(w[a])	56	57.303	ENSXETG00000009350	sfswap	67	45.594	Xenopus_tropicalis
FBgn0003638	su(w[a])	56	57.303	ENSXCOG00000005131	sfswap	70	45.850	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000395	mRNA 5'-splice site recognition	21873635.	IBA	Process
GO:0003723	RNA binding	-	IEA	Function