EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0003676 (Gene tree)
Gene ID: 42649
Gene Symbol: CCT1
Alias: -
Full Name: Chaperonin containing TCP1 subunit 1
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 2335
Position: chr3R: 22489105-22491439
Accession: FBgn0003676
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0084290	-	1916	-	FBpp0083683	557 (aa)	-	P12613
FBtr0084291	-	1980	-	FBpp0083684	557 (aa)	-	P12613

Gene Model

Click here to download FBgn0003676's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0003676's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0003676	CCT1	98	68.556	WBGene00000377	cct-1	99	68.556	Caenorhabditis_elegans
FBgn0003676	CCT1	99	73.333	ENSG00000120438	TCP1	100	91.209	Homo_sapiens
FBgn0003676	CCT1	99	72.613	ENSMUSG00000068039	Tcp1	99	74.510	Mus_musculus
FBgn0003676	CCT1	96	63.383	YDR212W	TCP1	96	63.383	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005524	ATP binding	-	IEA	Function
GO:0005829	cytosol	25294944.	HDA	Component
GO:0005832	chaperonin-containing T-complex	21873635.	IBA	Component
GO:0006457	protein folding	-	IEA	Process
GO:0030707	ovarian follicle cell development	26205122.	IMP	Process
GO:0051082	unfolded protein binding	-	IEA	Function