EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Paralogs

Gene Ontology

Description

Ensembl ID: FBgn0004227 (Gene tree)
Gene ID: 32603
Gene Symbol: nonA
Alias: -
Full Name: no on or off transient A
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 9979 bases
Position: chrX:16361569-16371547
Accession: FBgn0004227
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0074012	RRM_1	PF00076.22	3.6e-32	1	2
FBpp0074012	RRM_1	PF00076.22	3.6e-32	2	2
FBpp0100043	RRM_1	PF00076.22	5.7e-32	1	2
FBpp0100043	RRM_1	PF00076.22	5.7e-32	2	2
FBpp0074011	RRM_1	PF00076.22	5.7e-32	1	2
FBpp0074011	RRM_1	PF00076.22	5.7e-32	2	2
FBpp0309274	RRM_1	PF00076.22	5.7e-32	1	2
FBpp0309274	RRM_1	PF00076.22	5.7e-32	2	2

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0340313	-	6746	-	FBpp0309274	700 (aa)	-	Q04047
FBtr0100586	-	5008	-	FBpp0100043	698 (aa)	-	Q04047-2
FBtr0074233	-	2358	-	FBpp0074012	742 (aa)	-	Q04047
FBtr0074232	-	3747	-	FBpp0074011	700 (aa)	-	Q04047

Gene Model

Click here to download FBgn0004227's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0004227's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0004227	nonA	100	58.033	FBgn0015520	nonA-l	69	69.114

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	18981222.	IC	Process
GO:0000976	transcription regulatory region sequence-specific DNA binding	21873635.	IBA	Function
GO:0003729	mRNA binding	10908586.	ISS	Function
GO:0003729	mRNA binding	11092827.	TAS	Function
GO:0005634	nucleus	25294944.	HDA	Component
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	1740687.8270623.	IDA	Component
GO:0007601	visual perception	1740687.	IMP	Process
GO:0007601	visual perception	11092827.	TAS	Process
GO:0007632	visual behavior	11715043.	NAS	Process
GO:0042331	phototaxis	11715043.	NAS	Process
GO:0045433	male courtship behavior, veined wing generated song production	1740687.	IMP	Process
GO:0045433	male courtship behavior, veined wing generated song production	11715043.	NAS	Process
GO:0045433	male courtship behavior, veined wing generated song production	11092827.	TAS	Process
GO:0071011	precatalytic spliceosome	18981222.	HDA	Component
GO:0071013	catalytic step 2 spliceosome	18981222.	HDA	Component