EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0004419 (Gene tree)
Gene ID: 34364
Gene Symbol: me31B
Alias: -
Full Name: maternal expression at 31B
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 2832 bases
Position: chr2L:10239341-10242172
Accession: FBgn0004419
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0079566	DEAD	PF00270.29	4.3e-42	1	1
FBpp0079565	DEAD	PF00270.29	4.9e-42	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0079975	-	1699	-	FBpp0079565	459 (aa)	-	P23128
FBtr0079976	-	1600	-	FBpp0079566	428 (aa)	-	P23128-2

Gene Model

Click here to download FBgn0004419's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0004419's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0004419	me31B	87	35.356	FBgn0014189	Hel25E	89	35.356
FBgn0004419	me31B	83	33.243	FBgn0024804	Dbp80	78	34.137
FBgn0004419	me31B	90	49.153	FBgn0015075	Ddx1	57	49.153
FBgn0004419	me31B	77	31.356	FBgn0037561	CG9630	58	31.356
FBgn0004419	me31B	80	33.613	FBgn0037549	CG7878	50	33.613
FBgn0004419	me31B	87	32.115	FBgn0003261	Rm62	68	31.310
FBgn0004419	me31B	83	30.518	FBgn0036754	CG5589	62	30.518
FBgn0004419	me31B	89	33.419	FBgn0032919	CG9253	76	33.419
FBgn0004419	me31B	85	32.713	FBgn0035720	CG10077	66	31.090
FBgn0004419	me31B	71	30.357	FBgn0283442	vas	51	30.178
FBgn0004419	me31B	85	38.356	FBgn0037573	CG7483	91	38.356
FBgn0004419	me31B	79	32.958	FBgn0015331	abs	57	32.958
FBgn0004419	me31B	86	40.000	FBgn0001942	eIF4A	92	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0004419	me31B	93	77.750	WBGene00000479	cgh-1	96	76.399	Caenorhabditis_elegans
FBgn0004419	me31B	93	75.500	ENSCING00000007421	-	100	71.034	Ciona_intestinalis
FBgn0004419	me31B	95	68.642	YDL160C	-	82	68.039	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000932	P-body	16256742.17403906.17595295.20452345.21655181.	IDA	Component
GO:0003723	RNA binding	16469699.	IDA	Function
GO:0005515	protein binding	11546740.16256742.17178403.17923697.21447556.	IPI	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005737	cytoplasm	25294944.	HDA	Component
GO:0005737	cytoplasm	18708044.	IDA	Component
GO:0007279	pole cell formation	18590813.	IGI	Process
GO:0030707	ovarian follicle cell development	26205122.	IMP	Process
GO:0033962	cytoplasmic mRNA processing body assembly	17403906.	IMP	Process
GO:0035195	gene silencing by miRNA	19029310.	IGI	Process
GO:0036464	cytoplasmic ribonucleoprotein granule	11546740.	IDA	Component
GO:0043025	neuronal cell body	21267420.	IDA	Component
GO:0043186	P granule	18590813.21447556.	IDA	Component
GO:0046959	habituation	21795609.	IMP	Process
GO:0050688	regulation of defense response to virus	25126784.	IMP	Process
GO:0060148	positive regulation of posttranscriptional gene silencing	11546740.	IMP	Process
GO:0070971	endoplasmic reticulum exit site	16256742.	IDA	Component
GO:0071598	neuronal ribonucleoprotein granule	17178403.21267420.	IDA	Component
GO:0071683	sensory dendrite	21267420.	IDA	Component
GO:0090328	regulation of olfactory learning	21795609.	IMP	Process
GO:0098794	postsynapse	21267420.	IDA	Component
GO:0150011	regulation of neuron projection arborization	17178403.	IMP	Process
GO:1905618	positive regulation of miRNA mediated inhibition of translation	21267420.	IDA	Process
GO:1905618	positive regulation of miRNA mediated inhibition of translation	17178403.	IMP	Process
GO:1990120	messenger ribonucleoprotein complex assembly	21267420.	IMP	Process
GO:1990124	messenger ribonucleoprotein complex	16256742.17178403.21267420.	IDA	Component
GO:2000766	negative regulation of cytoplasmic translation	17178403.	IMP	Process