EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: FBgn0004584 (Gene tree)
Gene ID: 33500
Gene Symbol: Rrp1
Alias: -
Full Name: Recombination repair protein 1
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 2736 bases
Position: chr2L:2969773-2972508
Accession: FBgn0004584
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0077362	Exo_endo_phos	PF03372.23	2.8e-20	1	1
FBpp0288680	Exo_endo_phos	PF03372.23	3e-20	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0290241	-	2551	-	FBpp0288680	706 (aa)	-	B7YZZ9
FBtr0077678	-	2470	-	FBpp0077362	679 (aa)	-	P27864

Gene Model

Click here to download FBgn0004584's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0004584's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003677	DNA binding	-	IEA	Function
GO:0003906	DNA-(apurinic or apyrimidinic site) endonuclease activity	21873635.	IBA	Function
GO:0003906	DNA-(apurinic or apyrimidinic site) endonuclease activity	16507570.	IDA	Function
GO:0004528	phosphodiesterase I activity	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0006284	base-excision repair	21873635.	IBA	Process
GO:0008311	double-stranded DNA 3'-5' exodeoxyribonuclease activity	21873635.	IBA	Function
GO:0008408	3'-5' exonuclease activity	16507570.	IDA	Function
GO:0052720	class II DNA-(apurinic or apyrimidinic site) endonuclease activity	7692963.	IDA	Function