EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0004855 (Gene tree)
Gene ID: 41741
Gene Symbol: RpII15
Alias: -
Full Name: RNA polymerase II 15kD subunit
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 1090 bases
Position: chr3R:14309089-14310178
Accession: FBgn0004855
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0082384	RNA_POL_M_15KD	PF02150.16	2e-17	1	1
FBpp0301701	RNA_POL_M_15KD	PF02150.16	2e-17	1	1
FBpp0312065	RNA_POL_M_15KD	PF02150.16	2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0346348	-	1035	-	FBpp0312065	129 (aa)	-	P36958
FBtr0309995	-	694	-	FBpp0301701	129 (aa)	-	P36958
FBtr0082925	-	701	-	FBpp0082384	129 (aa)	-	P36958

Gene Model

Click here to download FBgn0004855's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0004855's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0004855	RpII15	84	31.481	FBgn0061362	CG33785	95	31.481

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0004855	RpII15	91	78.632	ENSG00000105258	POLR2I	91	83.750	Homo_sapiens
FBgn0004855	RpII15	97	75.200	ENSAPOG00000012409	polr2i	98	75.200	Acanthochromis_polyacanthus
FBgn0004855	RpII15	91	78.632	ENSAMEG00000000993	POLR2I	94	78.632	Ailuropoda_melanoleuca
FBgn0004855	RpII15	97	75.200	ENSAOCG00000024378	polr2i	98	75.200	Amphiprion_ocellaris
FBgn0004855	RpII15	97	75.200	ENSAPEG00000021748	polr2i	98	75.200	Amphiprion_percula
FBgn0004855	RpII15	91	77.778	ENSATEG00000000758	polr2i	93	77.778	Anabas_testudineus
FBgn0004855	RpII15	91	78.632	ENSANAG00000035318	POLR2I	94	78.632	Aotus_nancymaae
FBgn0004855	RpII15	97	74.400	ENSACLG00000001663	polr2i	98	74.400	Astatotilapia_calliptera
FBgn0004855	RpII15	91	78.632	ENSAMXG00000030198	polr2i	93	78.632	Astyanax_mexicanus
FBgn0004855	RpII15	91	78.632	ENSBTAG00000015002	POLR2I	94	78.632	Bos_taurus
FBgn0004855	RpII15	91	69.492	WBGene00022400	rpb-9	71	69.492	Caenorhabditis_elegans
FBgn0004855	RpII15	91	78.632	ENSCJAG00000009671	POLR2I	94	78.632	Callithrix_jacchus
FBgn0004855	RpII15	91	78.632	ENSCAFG00000006601	POLR2I	94	78.632	Canis_familiaris
FBgn0004855	RpII15	91	78.632	ENSCAFG00020018113	POLR2I	94	78.632	Canis_lupus_dingo
FBgn0004855	RpII15	91	78.632	ENSCHIG00000011961	POLR2I	94	78.632	Capra_hircus
FBgn0004855	RpII15	91	78.632	ENSTSYG00000028318	-	100	75.728	Carlito_syrichta
FBgn0004855	RpII15	80	52.427	ENSTSYG00000031752	-	95	52.427	Carlito_syrichta
FBgn0004855	RpII15	91	78.632	ENSCPOG00000012097	POLR2I	94	78.632	Cavia_porcellus
FBgn0004855	RpII15	91	77.778	ENSCCAG00000032214	-	94	77.778	Cebus_capucinus
FBgn0004855	RpII15	91	78.632	ENSCCAG00000022138	-	94	78.632	Cebus_capucinus
FBgn0004855	RpII15	91	78.632	ENSCATG00000017413	POLR2I	94	78.632	Cercocebus_atys
FBgn0004855	RpII15	91	78.632	ENSCLAG00000011800	POLR2I	94	78.632	Chinchilla_lanigera
FBgn0004855	RpII15	91	78.632	ENSCSAG00000004254	POLR2I	94	78.632	Chlorocebus_sabaeus
FBgn0004855	RpII15	97	75.200	ENSCPBG00000006726	POLR2I	100	75.200	Chrysemys_picta_bellii
FBgn0004855	RpII15	91	74.359	ENSCSAVG00000010630	-	93	74.359	Ciona_savignyi
FBgn0004855	RpII15	75	80.412	ENSCANG00000031951	POLR2I	92	80.412	Colobus_angolensis_palliatus
FBgn0004855	RpII15	91	77.966	ENSCSEG00000002213	polr2i	94	77.966	Cynoglossus_semilaevis
FBgn0004855	RpII15	93	78.333	ENSCVAG00000014797	polr2i	95	78.333	Cyprinodon_variegatus
FBgn0004855	RpII15	91	78.632	ENSDARG00000040443	polr2i	93	78.632	Danio_rerio
FBgn0004855	RpII15	91	78.632	ENSDNOG00000015842	POLR2I	94	78.632	Dasypus_novemcinctus
FBgn0004855	RpII15	82	64.151	ENSDORG00000028728	-	90	64.151	Dipodomys_ordii
FBgn0004855	RpII15	91	78.632	ENSDORG00000001852	-	94	78.632	Dipodomys_ordii
FBgn0004855	RpII15	77	59.596	ENSDORG00000028026	-	99	59.596	Dipodomys_ordii
FBgn0004855	RpII15	83	64.486	ENSDORG00000029259	-	89	64.486	Dipodomys_ordii
FBgn0004855	RpII15	91	78.632	ENSETEG00000012679	POLR2I	94	78.632	Echinops_telfairi
FBgn0004855	RpII15	97	74.400	ENSEBUG00000007333	polr2i	100	73.786	Eptatretus_burgeri
FBgn0004855	RpII15	91	78.632	ENSEASG00005002231	POLR2I	94	78.632	Equus_asinus_asinus
FBgn0004855	RpII15	91	78.632	ENSECAG00000013654	POLR2I	94	78.632	Equus_caballus
FBgn0004855	RpII15	91	78.632	ENSEEUG00000002113	POLR2I	94	78.632	Erinaceus_europaeus
FBgn0004855	RpII15	91	78.632	ENSELUG00000018012	polr2i	93	78.632	Esox_lucius
FBgn0004855	RpII15	91	78.632	ENSFCAG00000026052	POLR2I	94	78.632	Felis_catus
FBgn0004855	RpII15	91	78.632	ENSFDAG00000011350	POLR2I	94	78.632	Fukomys_damarensis
FBgn0004855	RpII15	93	77.500	ENSFHEG00000015659	polr2i	95	77.500	Fundulus_heteroclitus
FBgn0004855	RpII15	93	77.500	ENSGMOG00000013806	polr2i	95	77.500	Gadus_morhua
FBgn0004855	RpII15	95	74.603	ENSGALG00000038595	POLR2I	97	74.603	Gallus_gallus
FBgn0004855	RpII15	91	78.632	ENSGAFG00000001037	polr2i	93	78.632	Gambusia_affinis
FBgn0004855	RpII15	93	77.500	ENSGACG00000006679	polr2i	95	77.500	Gasterosteus_aculeatus
FBgn0004855	RpII15	97	75.200	ENSGAGG00000015806	POLR2I	100	75.200	Gopherus_agassizii
FBgn0004855	RpII15	91	78.632	ENSGGOG00000015426	POLR2I	94	78.632	Gorilla_gorilla
FBgn0004855	RpII15	91	78.632	ENSHBUG00000004140	polr2i	93	78.632	Haplochromis_burtoni
FBgn0004855	RpII15	80	75.728	ENSHGLG00000007388	POLR2I	100	75.728	Heterocephalus_glaber_female
FBgn0004855	RpII15	80	75.728	ENSHGLG00100014515	POLR2I	100	75.728	Heterocephalus_glaber_male
FBgn0004855	RpII15	91	78.632	ENSHCOG00000010967	polr2i	93	78.632	Hippocampus_comes
FBgn0004855	RpII15	91	78.632	ENSIPUG00000001127	polr2i	93	78.632	Ictalurus_punctatus
FBgn0004855	RpII15	91	78.632	ENSSTOG00000009411	POLR2I	94	78.632	Ictidomys_tridecemlineatus
FBgn0004855	RpII15	91	78.632	ENSJJAG00000014400	Polr2i	94	78.632	Jaculus_jaculus
FBgn0004855	RpII15	91	78.632	ENSKMAG00000001567	polr2i	93	78.632	Kryptolebias_marmoratus
FBgn0004855	RpII15	62	85.000	ENSLBEG00000028538	-	90	85.000	Labrus_bergylta
FBgn0004855	RpII15	91	78.632	ENSLBEG00000001220	polr2i	93	78.632	Labrus_bergylta
FBgn0004855	RpII15	91	79.661	ENSLACG00000009590	POLR2I	94	79.661	Latimeria_chalumnae
FBgn0004855	RpII15	91	78.632	ENSLOCG00000014818	polr2i	93	78.632	Lepisosteus_oculatus
FBgn0004855	RpII15	91	78.632	ENSLAFG00000015527	POLR2I	94	78.632	Loxodonta_africana
FBgn0004855	RpII15	91	78.632	ENSMFAG00000039443	POLR2I	94	78.632	Macaca_fascicularis
FBgn0004855	RpII15	80	75.728	ENSMMUG00000000522	POLR2I	100	75.728	Macaca_mulatta
FBgn0004855	RpII15	91	78.632	ENSMNEG00000029421	POLR2I	94	78.632	Macaca_nemestrina
FBgn0004855	RpII15	91	78.632	ENSMLEG00000039720	POLR2I	94	78.632	Mandrillus_leucophaeus
FBgn0004855	RpII15	97	74.400	ENSMAMG00000013970	polr2i	98	74.400	Mastacembelus_armatus
FBgn0004855	RpII15	91	78.632	ENSMZEG00005013082	polr2i	93	78.632	Maylandia_zebra
FBgn0004855	RpII15	91	77.778	ENSMGAG00000008576	POLR2I	94	77.778	Meleagris_gallopavo
FBgn0004855	RpII15	91	78.632	ENSMAUG00000001001	Polr2i	94	78.632	Mesocricetus_auratus
FBgn0004855	RpII15	91	78.632	ENSMICG00000010241	POLR2I	94	78.632	Microcebus_murinus
FBgn0004855	RpII15	91	78.632	ENSMOCG00000011984	Polr2i	94	78.632	Microtus_ochrogaster
FBgn0004855	RpII15	80	75.728	ENSMMOG00000004945	polr2i	100	75.728	Mola_mola
FBgn0004855	RpII15	91	78.632	ENSMODG00000014172	POLR2I	94	78.632	Monodelphis_domestica
FBgn0004855	RpII15	91	78.632	MGP_CAROLIEiJ_G0029507	Polr2i	100	75.728	Mus_caroli
FBgn0004855	RpII15	91	78.632	ENSMUSG00000019738	Polr2i	100	77.108	Mus_musculus
FBgn0004855	RpII15	91	78.632	MGP_PahariEiJ_G0012741	Polr2i	100	77.108	Mus_pahari
FBgn0004855	RpII15	91	78.632	MGP_SPRETEiJ_G0030603	Polr2i	100	75.728	Mus_spretus
FBgn0004855	RpII15	91	78.632	ENSMPUG00000005702	POLR2I	94	78.632	Mustela_putorius_furo
FBgn0004855	RpII15	91	78.632	ENSMLUG00000012317	POLR2I	94	78.632	Myotis_lucifugus
FBgn0004855	RpII15	91	78.632	ENSNGAG00000014966	Polr2i	94	78.632	Nannospalax_galili
FBgn0004855	RpII15	91	78.632	ENSNBRG00000000723	polr2i	93	78.632	Neolamprologus_brichardi
FBgn0004855	RpII15	91	78.632	ENSNLEG00000011691	POLR2I	94	78.632	Nomascus_leucogenys
FBgn0004855	RpII15	97	75.200	ENSOPRG00000001789	-	100	75.200	Ochotona_princeps
FBgn0004855	RpII15	97	74.400	ENSOPRG00000008681	-	100	74.400	Ochotona_princeps
FBgn0004855	RpII15	91	78.632	ENSODEG00000015015	-	94	78.632	Octodon_degus
FBgn0004855	RpII15	90	63.793	ENSODEG00000017901	-	88	63.793	Octodon_degus
FBgn0004855	RpII15	91	78.632	ENSONIG00000005397	polr2i	93	78.632	Oreochromis_niloticus
FBgn0004855	RpII15	91	78.632	ENSOCUG00000013044	POLR2I	94	78.632	Oryctolagus_cuniculus
FBgn0004855	RpII15	91	78.632	ENSOCUG00000024998	-	94	78.632	Oryctolagus_cuniculus
FBgn0004855	RpII15	91	78.632	ENSORLG00000013308	polr2i	93	78.632	Oryzias_latipes
FBgn0004855	RpII15	91	78.632	ENSORLG00020011281	polr2i	93	78.632	Oryzias_latipes_hni
FBgn0004855	RpII15	91	78.632	ENSORLG00015019529	polr2i	93	78.632	Oryzias_latipes_hsok
FBgn0004855	RpII15	91	78.632	ENSOMEG00000012586	polr2i	93	78.632	Oryzias_melastigma
FBgn0004855	RpII15	91	78.632	ENSOGAG00000024254	POLR2I	94	78.632	Otolemur_garnettii
FBgn0004855	RpII15	91	78.632	ENSOARG00000005266	POLR2I	94	78.632	Ovis_aries
FBgn0004855	RpII15	91	78.632	ENSPPAG00000033446	POLR2I	94	78.632	Pan_paniscus
FBgn0004855	RpII15	91	78.632	ENSPPRG00000007194	POLR2I	94	78.632	Panthera_pardus
FBgn0004855	RpII15	91	78.632	ENSPTIG00000018661	POLR2I	94	78.632	Panthera_tigris_altaica
FBgn0004855	RpII15	91	78.632	ENSPTRG00000010885	POLR2I	94	78.632	Pan_troglodytes
FBgn0004855	RpII15	91	78.632	ENSPANG00000004508	POLR2I	94	78.632	Papio_anubis
FBgn0004855	RpII15	91	78.632	ENSPKIG00000001086	polr2i	93	78.632	Paramormyrops_kingsleyae
FBgn0004855	RpII15	80	75.728	ENSPSIG00000011560	POLR2I	100	75.728	Pelodiscus_sinensis
FBgn0004855	RpII15	93	72.581	ENSPMGG00000016154	polr2i	95	72.581	Periophthalmus_magnuspinnatus
FBgn0004855	RpII15	91	78.632	ENSPEMG00000014212	Polr2i	94	78.632	Peromyscus_maniculatus_bairdii
FBgn0004855	RpII15	91	78.632	ENSPCIG00000015436	-	94	78.632	Phascolarctos_cinereus
FBgn0004855	RpII15	91	78.632	ENSPFOG00000016816	polr2i	93	78.632	Poecilia_formosa
FBgn0004855	RpII15	91	78.632	ENSPLAG00000010639	polr2i	93	78.632	Poecilia_latipinna
FBgn0004855	RpII15	91	78.632	ENSPMEG00000005956	polr2i	93	78.632	Poecilia_mexicana
FBgn0004855	RpII15	91	78.632	ENSPREG00000004227	polr2i	93	78.632	Poecilia_reticulata
FBgn0004855	RpII15	91	78.632	ENSPPYG00000009897	POLR2I	94	78.632	Pongo_abelii
FBgn0004855	RpII15	91	78.632	ENSPCAG00000003494	POLR2I	94	78.632	Procavia_capensis
FBgn0004855	RpII15	91	78.632	ENSPCOG00000018643	POLR2I	94	78.632	Propithecus_coquereli
FBgn0004855	RpII15	91	78.632	ENSPVAG00000012883	POLR2I	94	78.632	Pteropus_vampyrus
FBgn0004855	RpII15	91	78.632	ENSPNYG00000011908	polr2i	93	78.632	Pundamilia_nyererei
FBgn0004855	RpII15	91	78.632	ENSPNAG00000005859	polr2i	93	78.632	Pygocentrus_nattereri
FBgn0004855	RpII15	91	78.632	ENSRNOG00000020799	LOC103690054	94	78.632	Rattus_norvegicus
FBgn0004855	RpII15	91	78.632	ENSRNOG00000050560	Polr2i	94	78.632	Rattus_norvegicus
FBgn0004855	RpII15	91	78.632	ENSRBIG00000037225	POLR2I	94	78.632	Rhinopithecus_bieti
FBgn0004855	RpII15	91	78.632	ENSRROG00000042843	POLR2I	94	78.632	Rhinopithecus_roxellana
FBgn0004855	RpII15	86	51.351	YGL070C	RPB9	89	51.351	Saccharomyces_cerevisiae
FBgn0004855	RpII15	91	78.632	ENSSBOG00000030799	-	94	78.632	Saimiri_boliviensis_boliviensis
FBgn0004855	RpII15	90	60.345	ENSSBOG00000022998	-	68	60.345	Saimiri_boliviensis_boliviensis
FBgn0004855	RpII15	91	78.632	ENSSFOG00015022523	polr2i	93	78.632	Scleropages_formosus
FBgn0004855	RpII15	91	77.778	ENSSMAG00000003335	polr2i	93	77.778	Scophthalmus_maximus
FBgn0004855	RpII15	91	77.778	ENSSDUG00000005483	polr2i	93	77.778	Seriola_dumerili
FBgn0004855	RpII15	91	77.778	ENSSLDG00000009341	polr2i	93	77.778	Seriola_lalandi_dorsalis
FBgn0004855	RpII15	91	78.632	ENSSARG00000009331	POLR2I	94	78.632	Sorex_araneus
FBgn0004855	RpII15	91	77.778	ENSSPUG00000012658	POLR2I	94	77.778	Sphenodon_punctatus
FBgn0004855	RpII15	91	78.632	ENSSPAG00000015734	polr2i	93	78.632	Stegastes_partitus
FBgn0004855	RpII15	91	78.632	ENSSSCG00000039196	POLR2I	94	78.632	Sus_scrofa
FBgn0004855	RpII15	91	78.632	ENSTRUG00000022235	polr2i	93	78.632	Takifugu_rubripes
FBgn0004855	RpII15	91	78.632	ENSTNIG00000011737	polr2i	93	78.632	Tetraodon_nigroviridis
FBgn0004855	RpII15	91	78.632	ENSTTRG00000003919	POLR2I	94	78.632	Tursiops_truncatus
FBgn0004855	RpII15	91	78.632	ENSUAMG00000020575	POLR2I	94	78.632	Ursus_americanus
FBgn0004855	RpII15	91	78.632	ENSUMAG00000020809	POLR2I	94	78.632	Ursus_maritimus
FBgn0004855	RpII15	91	78.632	ENSVVUG00000013588	POLR2I	94	78.632	Vulpes_vulpes
FBgn0004855	RpII15	91	78.632	ENSXCOG00000001119	polr2i	93	78.632	Xiphophorus_couchianus
FBgn0004855	RpII15	91	78.632	ENSXMAG00000021278	polr2i	93	78.632	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000278	mitotic cell cycle	18463163.	HMP	Process
GO:0001193	maintenance of transcriptional fidelity during DNA-templated transcription elongation from RNA polymerase II promoter	21873635.	IBA	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	21873635.	IBA	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	10908585.	ISS	Function
GO:0005634	nucleus	12021283.	IDA	Component
GO:0005665	RNA polymerase II, core complex	21873635.	IBA	Component
GO:0005665	RNA polymerase II, core complex	8243669.12021283.	IDA	Component
GO:0005665	RNA polymerase II, core complex	10908585.	ISS	Component
GO:0006283	transcription-coupled nucleotide-excision repair	21873635.	IBA	Process
GO:0006366	transcription by RNA polymerase II	10908585.	ISS	Process
GO:0006367	transcription initiation from RNA polymerase II promoter	21873635.	IBA	Process
GO:0006379	mRNA cleavage	-	IEA	Process
GO:0008270	zinc ion binding	-	IEA	Function