EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: FBgn0004903 (Gene tree)
Gene ID: 43231
Gene Symbol: Rb97D
Alias: -
Full Name: Ribonuclear protein at 97D
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 3614 bases
Position: chr3R:26872129-26875742
Accession: FBgn0004903
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0099740	RRM_1	PF00076.22	9.1e-33	1	2
FBpp0099740	RRM_1	PF00076.22	9.1e-33	2	2
FBpp0099741	RRM_1	PF00076.22	9.1e-33	1	2
FBpp0099741	RRM_1	PF00076.22	9.1e-33	2	2
FBpp0084462	RRM_1	PF00076.22	1.1e-32	1	2
FBpp0084462	RRM_1	PF00076.22	1.1e-32	2	2
FBpp0099739	RRM_1	PF00076.22	1.1e-32	1	2
FBpp0099739	RRM_1	PF00076.22	1.1e-32	2	2
FBpp0099743	RRM_1	PF00076.22	1.1e-32	1	2
FBpp0099743	RRM_1	PF00076.22	1.1e-32	2	2
FBpp0084463	RRM_1	PF00076.22	1.2e-32	1	2
FBpp0084463	RRM_1	PF00076.22	1.2e-32	2	2
FBpp0099742	RRM_1	PF00076.22	1.2e-32	1	2
FBpp0099742	RRM_1	PF00076.22	1.2e-32	2	2
FBpp0099744	RRM_1	PF00076.22	1.2e-32	1	2
FBpp0099744	RRM_1	PF00076.22	1.2e-32	2	2
FBpp0099745	RRM_1	PF00076.22	1.2e-32	1	2
FBpp0099745	RRM_1	PF00076.22	1.2e-32	2	2

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0100340	-	2828	-	FBpp0099745	471 (aa)	-	Q02926
FBtr0085093	-	3101	-	FBpp0084463	471 (aa)	-	Q02926
FBtr0085092	-	2629	-	FBpp0084462	465 (aa)	-	A4V3G9
FBtr0100338	-	2810	-	FBpp0099743	465 (aa)	-	A4V3G9
FBtr0100339	-	2094	-	FBpp0099744	471 (aa)	-	Q02926
FBtr0100334	-	2506	-	FBpp0099739	465 (aa)	-	A4V3G9
FBtr0100335	-	2633	-	FBpp0099740	434 (aa)	-	Q59DT6
FBtr0100336	-	2510	-	FBpp0099741	434 (aa)	-	Q59DT6
FBtr0100337	-	2524	-	FBpp0099742	471 (aa)	-	Q02926

Gene Model

Click here to download FBgn0004903's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0004903's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0003729	mRNA binding	10908586.	ISS	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:1990904	ribonucleoprotein complex	21873635.	IBA	Component