EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
FBgn0010173 (Gene tree)
Gene ID
40972
Gene Symbol
RpA-70
Alias
-
Full Name
Replication Protein A 70
Gene Type
protein_coding
Species
Drosophila_melanogaster
Status
confidence
Strand
Minus strand
Length
2332 bases
Position
chr3R:8262120-8264451
Accession
FBgn0010173
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
FBpp0081356tRNA_anti-codonPF01336.254.2e-1311
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27378189Global changes of the RNA bound proteome during the maternal-to-zygotic transition in DrosophilaIC & embryos.MZT2016 Jul 5Sysoev VODOI: 10.1038/ncomms12128
27197210The mRNA-bound proteome of the early fly embryoIC & embryos2016 Apr 28Wessels HHDOI: 10.1101/gr.200386.115
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
FBtr0081867-2135-FBpp0081356603 (aa)-Q24492
Gene Model
Click here to download FBgn0010173's gene model file
Protein-Protein Interaction (PPI)

Clik here to download FBgn0010173's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
FBgn0010173RpA-709044.056ENSAPOG00000019409RPA18043.124Acanthochromis_polyacanthus
FBgn0010173RpA-709942.434ENSAPOG00000011658rpa19941.749Acanthochromis_polyacanthus
FBgn0010173RpA-709941.720ENSAMEG00000007706RPA19940.989Ailuropoda_melanoleuca
FBgn0010173RpA-709540.855ENSACIG00000007277rpa19939.559Amphilophus_citrinellus
FBgn0010173RpA-709438.176ENSACIG00000012881RPA19937.669Amphilophus_citrinellus
FBgn0010173RpA-709942.244ENSAOCG00000023376rpa19942.756Amphiprion_ocellaris
FBgn0010173RpA-709841.263ENSAOCG00000009003RPA19934.877Amphiprion_ocellaris
FBgn0010173RpA-709942.574ENSAPEG00000008634rpa19942.079Amphiprion_percula
FBgn0010173RpA-709243.953ENSAPEG00000019132RPA18543.023Amphiprion_percula
FBgn0010173RpA-709243.972ENSATEG00000022024rpa19942.832Anabas_testudineus
FBgn0010173RpA-709444.884ENSATEG00000006443RPA18644.419Anabas_testudineus
FBgn0010173RpA-709635.894ENSAPLG00000012442RPA19935.303Anas_platyrhynchos
FBgn0010173RpA-709842.881ENSACAG00000014490RPA19842.546Anolis_carolinensis
FBgn0010173RpA-709544.234ENSANAG00000023456RPA19843.718Aotus_nancymaae
FBgn0010173RpA-709342.681ENSACLG00000006640rpa19941.975Astatotilapia_calliptera
FBgn0010173RpA-709837.598ENSACLG00000005223RPA19937.285Astatotilapia_calliptera
FBgn0010173RpA-709841.803ENSAMXG00000008418rpa19941.914Astyanax_mexicanus
FBgn0010173RpA-709843.317ENSBTAG00000009711RPA19942.811Bos_taurus
FBgn0010173RpA-709842.326ENSCJAG00000001848RPA19942.649Callithrix_jacchus
FBgn0010173RpA-709842.673ENSCAFG00000019249RPA19942.512Canis_familiaris
FBgn0010173RpA-709842.673ENSCAFG00020009847RPA19942.512Canis_lupus_dingo
FBgn0010173RpA-709842.811ENSCHIG00000026308RPA19942.811Capra_hircus
FBgn0010173RpA-709842.628ENSTSYG00000003482-9941.827Carlito_syrichta
FBgn0010173RpA-709942.512ENSCPOG00000000035RPA19942.029Cavia_porcellus
FBgn0010173RpA-709836.585ENSCCAG00000010981RPA19936.748Cebus_capucinus
FBgn0010173RpA-709941.318ENSCLAG00000015045-9940.449Chinchilla_lanigera
FBgn0010173RpA-709842.834ENSCLAG00000005185-9941.961Chinchilla_lanigera
FBgn0010173RpA-709837.316ENSCSAG00000013833RPA19837.439Chlorocebus_sabaeus
FBgn0010173RpA-709442.470ENSCHOG00000013540-9941.919Choloepus_hoffmanni
FBgn0010173RpA-707148.492ENSCHOG00000009454-9747.564Choloepus_hoffmanni
FBgn0010173RpA-709842.258ENSCPBG00000020377RPA19941.721Chrysemys_picta_bellii
FBgn0010173RpA-709939.245ENSCING00000023482-9938.259Ciona_intestinalis
FBgn0010173RpA-709643.836ENSCANG00000030911RPA19842.882Colobus_angolensis_palliatus
FBgn0010173RpA-709842.652ENSCGRG00001008197Rpa19941.879Cricetulus_griseus_chok1gshd
FBgn0010173RpA-707148.724ENSCGRG00000000582Rpa18348.028Cricetulus_griseus_crigri
FBgn0010173RpA-709941.789ENSCSEG00000013066rpa19940.717Cynoglossus_semilaevis
FBgn0010173RpA-709935.918ENSCSEG00000012726RPA19935.871Cynoglossus_semilaevis
FBgn0010173RpA-709344.844ENSCVAG00000013446-8144.125Cyprinodon_variegatus
FBgn0010173RpA-709941.340ENSCVAG00000019431rpa19941.696Cyprinodon_variegatus
FBgn0010173RpA-709842.574ENSDARG00000003938rpa19942.079Danio_rerio
FBgn0010173RpA-709742.434ENSDNOG00000017218RPA19741.776Dasypus_novemcinctus
FBgn0010173RpA-709842.439ENSDORG00000006199Rpa19941.977Dipodomys_ordii
FBgn0010173RpA-708142.381ENSETEG00000017608RPA18141.148Echinops_telfairi
FBgn0010173RpA-709742.150ENSEASG00005009372RPA19842.755Equus_asinus_asinus
FBgn0010173RpA-709941.868ENSECAG00000023886RPA19941.506Equus_caballus
FBgn0010173RpA-706947.268ENSEEUG00000002186-6846.318Erinaceus_europaeus
FBgn0010173RpA-708739.888ENSELUG00000006136RPA19939.513Esox_lucius
FBgn0010173RpA-709843.648ENSELUG00000021071rpa19943.163Esox_lucius
FBgn0010173RpA-709843.569ENSFCAG00000006306RPA19942.926Felis_catus
FBgn0010173RpA-709941.167ENSFALG00000006575RPA19941.005Ficedula_albicollis
FBgn0010173RpA-709842.557ENSFDAG00000007720RPA19942.114Fukomys_damarensis
FBgn0010173RpA-709942.062ENSFHEG00000003580rpa19941.408Fundulus_heteroclitus
FBgn0010173RpA-709843.750ENSGMOG00000010382rpa19943.074Gadus_morhua
FBgn0010173RpA-709941.262ENSGALG00000003072RPA19940.777Gallus_gallus
FBgn0010173RpA-709942.574ENSGAFG00000012916rpa19941.749Gambusia_affinis
FBgn0010173RpA-709144.573ENSGAFG00000020953RPA18544.573Gambusia_affinis
FBgn0010173RpA-709941.639ENSGACG00000010856rpa19941.137Gasterosteus_aculeatus
FBgn0010173RpA-709842.419ENSGAGG00000013611RPA19941.883Gopherus_agassizii
FBgn0010173RpA-709843.573ENSGGOG00000014186RPA19943.449Gorilla_gorilla
FBgn0010173RpA-709941.667ENSHBUG00000017773rpa19940.946Haplochromis_burtoni
FBgn0010173RpA-709435.764ENSHBUG00000009348RPA19835.243Haplochromis_burtoni
FBgn0010173RpA-709842.233ENSHGLG00000008846RPA19942.114Heterocephalus_glaber_female
FBgn0010173RpA-709842.233ENSHGLG00100017755-9942.114Heterocephalus_glaber_male
FBgn0010173RpA-709839.448ENSHGLG00100000799-9838.862Heterocephalus_glaber_male
FBgn0010173RpA-709238.103ENSHGLG00100002005-9638.342Heterocephalus_glaber_male
FBgn0010173RpA-709940.000ENSHCOG00000001401rpa19940.584Hippocampus_comes
FBgn0010173RpA-709135.368ENSHCOG00000000351RPA19135.009Hippocampus_comes
FBgn0010173RpA-709842.036ENSIPUG00000004400rpa19941.544Ictalurus_punctatus
FBgn0010173RpA-708942.734ENSSTOG00000022475RPA19442.014Ictidomys_tridecemlineatus
FBgn0010173RpA-709442.857ENSJJAG00000000876Rpa19742.185Jaculus_jaculus
FBgn0010173RpA-709941.883ENSKMAG00000005605rpa19941.396Kryptolebias_marmoratus
FBgn0010173RpA-709840.230ENSKMAG00000000234RPA19939.478Kryptolebias_marmoratus
FBgn0010173RpA-709645.708ENSLBEG00000002281RPA18144.780Labrus_bergylta
FBgn0010173RpA-709942.642ENSLBEG00000021604rpa19942.140Labrus_bergylta
FBgn0010173RpA-707147.005ENSLACG00000007210RPA18646.313Latimeria_chalumnae
FBgn0010173RpA-709743.594ENSLOCG00000006397rpa19843.261Lepisosteus_oculatus
FBgn0010173RpA-709841.561ENSLAFG00000015354RPA19941.308Loxodonta_africana
FBgn0010173RpA-708144.358ENSMFAG00000036138-10043.798Macaca_fascicularis
FBgn0010173RpA-709643.377ENSMMUG00000011604-9942.904Macaca_mulatta
FBgn0010173RpA-709840.584ENSMMUG00000002442-9840.359Macaca_mulatta
FBgn0010173RpA-709443.294ENSMNEG00000031632-9742.809Macaca_nemestrina
FBgn0010173RpA-709838.731ENSMNEG00000029837-9938.230Macaca_nemestrina
FBgn0010173RpA-709640.033ENSMLEG00000038768-9840.230Mandrillus_leucophaeus
FBgn0010173RpA-709942.553ENSMAMG00000017993rpa19843.494Mastacembelus_armatus
FBgn0010173RpA-709644.289ENSMAMG00000020097RPA18543.823Mastacembelus_armatus
FBgn0010173RpA-709941.667ENSMZEG00005007551rpa19940.946Maylandia_zebra
FBgn0010173RpA-709837.598ENSMZEG00005024731RPA19937.285Maylandia_zebra
FBgn0010173RpA-709841.424ENSMGAG00000005315RPA19940.488Meleagris_gallopavo
FBgn0010173RpA-709642.529ENSMAUG00000010474Rpa19942.623Mesocricetus_auratus
FBgn0010173RpA-709842.055ENSMICG00000012867RPA19941.894Microcebus_murinus
FBgn0010173RpA-709843.780ENSMOCG00000013019Rpa19942.973Microtus_ochrogaster
FBgn0010173RpA-709542.177ENSMMOG00000014292rpa19941.497Mola_mola
FBgn0010173RpA-709739.629ENSMMOG00000010868RPA19839.123Mola_mola
FBgn0010173RpA-709842.276ENSMODG00000010549RPA19841.789Monodelphis_domestica
FBgn0010173RpA-709644.084ENSMALG00000001208RPA18043.387Monopterus_albus
FBgn0010173RpA-709943.067ENSMALG00000011453rpa19942.414Monopterus_albus
FBgn0010173RpA-709942.308MGP_CAROLIEiJ_G0016734Rpa19941.667Mus_caroli
FBgn0010173RpA-709942.022ENSMUSG00000000751Rpa19941.232Mus_musculus
FBgn0010173RpA-709942.540MGP_PahariEiJ_G0017871Rpa19941.308Mus_pahari
FBgn0010173RpA-709941.956MGP_SPRETEiJ_G0017577Rpa19941.167Mus_spretus
FBgn0010173RpA-709842.673ENSMPUG00000013119RPA19942.029Mustela_putorius_furo
FBgn0010173RpA-709842.326ENSMLUG00000006113RPA19941.842Myotis_lucifugus
FBgn0010173RpA-709442.521ENSNGAG00000004522Rpa19341.963Nannospalax_galili
FBgn0010173RpA-709342.681ENSNBRG00000020595rpa19842.124Neolamprologus_brichardi
FBgn0010173RpA-709738.103ENSNBRG00000009672RPA19737.604Neolamprologus_brichardi
FBgn0010173RpA-709842.003ENSNLEG00000017149RPA19942.326Nomascus_leucogenys
FBgn0010173RpA-708741.242ENSMEUG00000006714RPA18941.203Notamacropus_eugenii
FBgn0010173RpA-709540.692ENSODEG00000009038RPA19639.735Octodon_degus
FBgn0010173RpA-709941.318ENSONIG00000013135rpa19940.777Oreochromis_niloticus
FBgn0010173RpA-709642.479ENSOANG00000010880RPA19942.574Ornithorhynchus_anatinus
FBgn0010173RpA-709839.722ENSOCUG00000001504RPA19939.567Oryctolagus_cuniculus
FBgn0010173RpA-709837.443ENSORLG00000003368RPA18444.796Oryzias_latipes
FBgn0010173RpA-709942.741ENSORLG00000004856rpa19942.088Oryzias_latipes
FBgn0010173RpA-709942.741ENSORLG00020008980rpa19942.088Oryzias_latipes_hni
FBgn0010173RpA-709844.206ENSORLG00020015284RPA18344.118Oryzias_latipes_hni
FBgn0010173RpA-707244.700ENSORLG00015005867-9344.878Oryzias_latipes_hsok
FBgn0010173RpA-709838.140ENSORLG00015020383RPA19937.209Oryzias_latipes_hsok
FBgn0010173RpA-709942.741ENSORLG00015013982rpa19942.088Oryzias_latipes_hsok
FBgn0010173RpA-709538.585ENSOMEG00000011040RPA19840.636Oryzias_melastigma
FBgn0010173RpA-709942.454ENSOMEG00000004704rpa19941.680Oryzias_melastigma
FBgn0010173RpA-707443.103ENSOGAG00000029379-9842.759Otolemur_garnettii
FBgn0010173RpA-709942.628ENSOGAG00000005581-9941.987Otolemur_garnettii
FBgn0010173RpA-709842.811ENSOARG00000014479RPA19942.811Ovis_aries
FBgn0010173RpA-709842.165ENSPPAG00000039680RPA19941.842Pan_paniscus
FBgn0010173RpA-709843.366ENSPPRG00000011807RPA19843.042Panthera_pardus
FBgn0010173RpA-709843.087ENSPTIG00000007898RPA19942.765Panthera_tigris_altaica
FBgn0010173RpA-709842.003ENSPTRG00000008539RPA19941.680Pan_troglodytes
FBgn0010173RpA-709843.415ENSPANG00000024592RPA19942.950Papio_anubis
FBgn0010173RpA-709342.955ENSPKIG00000008053rpa19342.882Paramormyrops_kingsleyae
FBgn0010173RpA-709642.479ENSPSIG00000015617RPA19942.645Pelodiscus_sinensis
FBgn0010173RpA-709443.007ENSPMGG00000011589rpa19843.058Periophthalmus_magnuspinnatus
FBgn0010173RpA-709340.675ENSPMGG00000000543RPA19939.929Periophthalmus_magnuspinnatus
FBgn0010173RpA-709843.660ENSPEMG00000021061Rpa19942.419Peromyscus_maniculatus_bairdii
FBgn0010173RpA-709841.205ENSPCIG00000019049RPA19841.205Phascolarctos_cinereus
FBgn0010173RpA-709943.770ENSPFOG00000003987rpa19942.741Poecilia_formosa
FBgn0010173RpA-709943.208ENSPLAG00000004984rpa19942.390Poecilia_latipinna
FBgn0010173RpA-709336.262ENSPLAG00000008844-9636.276Poecilia_latipinna
FBgn0010173RpA-708645.614ENSPMEG00000003627-8345.363Poecilia_mexicana
FBgn0010173RpA-709943.934ENSPMEG00000020602rpa19943.007Poecilia_mexicana
FBgn0010173RpA-709144.111ENSPREG00000010119RPA18344.111Poecilia_reticulata
FBgn0010173RpA-709339.688ENSPREG00000010174rpa19638.648Poecilia_reticulata
FBgn0010173RpA-709842.697ENSPCOG00000001799RPA19942.055Propithecus_coquereli
FBgn0010173RpA-709942.673ENSPVAG00000002149RPA19942.512Pteropus_vampyrus
FBgn0010173RpA-709837.441ENSPNYG00000024165RPA19937.129Pundamilia_nyererei
FBgn0010173RpA-709941.830ENSPNYG00000016316rpa19941.975Pundamilia_nyererei
FBgn0010173RpA-709737.730ENSPNAG00000008599rpa19538.007Pygocentrus_nattereri
FBgn0010173RpA-709943.200ENSRNOG00000003123Rpa19942.097Rattus_norvegicus
FBgn0010173RpA-709842.626ENSRBIG00000036587RPA19942.139Rhinopithecus_bieti
FBgn0010173RpA-709841.063ENSRROG00000043278RPA19940.580Rhinopithecus_roxellana
FBgn0010173RpA-709532.558YAR007CRFA19531.960Saccharomyces_cerevisiae
FBgn0010173RpA-708943.162ENSSBOG00000030233RPA19643.517Saimiri_boliviensis_boliviensis
FBgn0010173RpA-709742.484ENSSHAG00000007969RPA19841.667Sarcophilus_harrisii
FBgn0010173RpA-709843.719ENSSFOG00015005362rpa19243.230Scleropages_formosus
FBgn0010173RpA-709842.405ENSSMAG00000019746RPA19341.772Scophthalmus_maximus
FBgn0010173RpA-709145.814ENSSDUG00000016358RPA18943.158Seriola_dumerili
FBgn0010173RpA-709942.182ENSSDUG00000011949rpa19941.463Seriola_dumerili
FBgn0010173RpA-709246.172ENSSLDG00000020784RPA18843.487Seriola_lalandi_dorsalis
FBgn0010173RpA-709942.258ENSSLDG00000011806rpa19941.721Seriola_lalandi_dorsalis
FBgn0010173RpA-708140.078ENSSARG00000007506RPA18439.726Sorex_araneus
FBgn0010173RpA-709641.903ENSSPUG00000007223RPA19941.235Sphenodon_punctatus
FBgn0010173RpA-709941.967ENSSPAG00000009903rpa19941.447Stegastes_partitus
FBgn0010173RpA-709740.336ENSSPAG00000011165RPA19839.832Stegastes_partitus
FBgn0010173RpA-709943.740ENSSSCG00000017822RPA19943.072Sus_scrofa
FBgn0010173RpA-709941.789ENSTGUG00000005775RPA19941.626Taeniopygia_guttata
FBgn0010173RpA-709942.974ENSTRUG00000003616rpa19942.182Takifugu_rubripes
FBgn0010173RpA-709844.136ENSTRUG00000000405RPA18343.497Takifugu_rubripes
FBgn0010173RpA-709943.291ENSTNIG00000016199rpa19942.971Tetraodon_nigroviridis
FBgn0010173RpA-707147.685ENSTBEG00000002709RPA17146.759Tupaia_belangeri
FBgn0010173RpA-709842.301ENSTTRG00000001169RPA19942.139Tursiops_truncatus
FBgn0010173RpA-708754.717ENSUAMG00000015676RPA19747.170Ursus_americanus
FBgn0010173RpA-709842.809ENSUMAG00000009328RPA19942.237Ursus_maritimus
FBgn0010173RpA-709742.157ENSVPAG00000009443RPA19841.503Vicugna_pacos
FBgn0010173RpA-709842.029ENSVVUG00000021715RPA19942.488Vulpes_vulpes
FBgn0010173RpA-709942.122ENSXETG00000013538rpa19942.301Xenopus_tropicalis
FBgn0010173RpA-709342.783ENSXCOG00000010068rpa19541.724Xiphophorus_couchianus
FBgn0010173RpA-709439.130ENSXCOG00000009899-9938.957Xiphophorus_couchianus
FBgn0010173RpA-709044.804ENSXMAG00000010333RPA18044.573Xiphophorus_maculatus
FBgn0010173RpA-709942.787ENSXMAG00000004102rpa19942.032Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000723telomere maintenance21873635.IBAProcess
GO:0000724double-strand break repair via homologous recombination21873635.IBAProcess
GO:0000784nuclear chromosome, telomeric region21873635.IBAComponent
GO:0003684damaged DNA binding21873635.IBAFunction
GO:0003697single-stranded DNA binding21873635.IBAFunction
GO:0003697single-stranded DNA binding8494903.IDAFunction
GO:0005634nucleus7649375.IDAComponent
GO:0005662DNA replication factor A complex21873635.IBAComponent
GO:0005662DNA replication factor A complex8494903.IDAComponent
GO:0006260DNA replication-ISSProcess
GO:0006261DNA-dependent DNA replication21873635.IBAProcess
GO:0006261DNA-dependent DNA replication8494903.IDAProcess
GO:0006268DNA unwinding involved in DNA replication21873635.IBAProcess
GO:0006281DNA repair21873635.IBAProcess
GO:0006289nucleotide-excision repair21873635.IBAProcess
GO:0007004telomere maintenance via telomerase21873635.IBAProcess
GO:0043047single-stranded telomeric DNA binding21873635.IBAFunction
GO:0043565sequence-specific DNA binding21873635.IBAFunction
GO:0051321meiotic cell cycle21873635.IBAProcess

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