EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0010247 (Gene tree)
Gene ID: 3355109
Gene Symbol: Parp
Alias: -
Full Name: Poly-(ADP-ribose) polymerase
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 125704 bases
Position: chr3R:3461351-3587054
Accession: FBgn0010247
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0112608	PARP	PF00644.20	6.6e-75	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0113885	-	3112	-	FBpp0112608	994 (aa)	-	P35875

Gene Model

Click here to download FBgn0010247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0010247's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0010247	Parp	99	41.609	ENSG00000143799	PARP1	99	41.708	Homo_sapiens
FBgn0010247	Parp	99	40.887	ENSAPOG00000006414	parp1	99	41.281	Acanthochromis_polyacanthus
FBgn0010247	Parp	96	40.804	ENSAMEG00000014451	PARP1	99	41.206	Ailuropoda_melanoleuca
FBgn0010247	Parp	99	41.907	ENSACIG00000005651	parp1	99	41.907	Amphilophus_citrinellus
FBgn0010247	Parp	99	40.887	ENSAOCG00000021005	parp1	99	41.281	Amphiprion_ocellaris
FBgn0010247	Parp	99	40.887	ENSAPEG00000004784	parp1	99	41.281	Amphiprion_percula
FBgn0010247	Parp	99	40.963	ENSATEG00000010457	parp1	99	41.339	Anabas_testudineus
FBgn0010247	Parp	84	41.455	ENSAPLG00000014039	PARP1	97	41.686	Anas_platyrhynchos
FBgn0010247	Parp	99	41.200	ENSACAG00000006189	PARP1	99	41.560	Anolis_carolinensis
FBgn0010247	Parp	99	41.724	ENSANAG00000032699	PARP1	99	41.797	Aotus_nancymaae
FBgn0010247	Parp	99	41.766	ENSACLG00000015489	parp1	99	41.766	Astatotilapia_calliptera
FBgn0010247	Parp	99	40.371	ENSAMXG00000006465	parp1	99	40.846	Astyanax_mexicanus
FBgn0010247	Parp	99	41.610	ENSBTAG00000000837	PARP1	99	41.707	Bos_taurus
FBgn0010247	Parp	86	38.050	WBGene00004049	parp-1	99	41.154	Caenorhabditis_elegans
FBgn0010247	Parp	99	41.602	ENSCJAG00000012831	PARP1	99	41.781	Callithrix_jacchus
FBgn0010247	Parp	96	40.571	ENSCAFG00000016089	PARP1	99	41.057	Canis_familiaris
FBgn0010247	Parp	99	41.495	ENSCAFG00020001660	PARP1	99	41.691	Canis_lupus_dingo
FBgn0010247	Parp	99	41.822	ENSCHIG00000018072	PARP1	99	41.822	Capra_hircus
FBgn0010247	Parp	89	42.077	ENSTSYG00000003699	PARP1	98	42.186	Carlito_syrichta
FBgn0010247	Parp	96	36.089	ENSCAPG00000011113	-	98	36.773	Cavia_aperea
FBgn0010247	Parp	99	41.945	ENSCPOG00000015643	-	99	42.141	Cavia_porcellus
FBgn0010247	Parp	99	41.951	ENSCCAG00000033484	PARP1	99	42.049	Cebus_capucinus
FBgn0010247	Parp	99	41.904	ENSCATG00000038981	PARP1	99	42.002	Cercocebus_atys
FBgn0010247	Parp	99	41.228	ENSCLAG00000006637	PARP1	99	41.326	Chinchilla_lanigera
FBgn0010247	Parp	58	60.484	ENSCHOG00000003539	PARP1	64	60.484	Choloepus_hoffmanni
FBgn0010247	Parp	99	41.790	ENSCPBG00000011958	PARP1	99	42.141	Chrysemys_picta_bellii
FBgn0010247	Parp	98	41.276	ENSCANG00000041340	PARP1	99	41.726	Colobus_angolensis_palliatus
FBgn0010247	Parp	99	41.298	ENSCGRG00001020559	Parp1	99	41.495	Cricetulus_griseus_chok1gshd
FBgn0010247	Parp	96	40.711	ENSCGRG00000004864	Parp1	99	40.914	Cricetulus_griseus_crigri
FBgn0010247	Parp	99	41.454	ENSCSEG00000020665	parp1	99	42.141	Cynoglossus_semilaevis
FBgn0010247	Parp	96	40.997	ENSCVAG00000021372	parp1	99	40.997	Cyprinodon_variegatus
FBgn0010247	Parp	99	41.246	ENSDARG00000019529	parp1	99	41.379	Danio_rerio
FBgn0010247	Parp	96	40.571	ENSDNOG00000012059	PARP1	99	40.486	Dasypus_novemcinctus
FBgn0010247	Parp	98	40.339	ENSDORG00000005234	Parp1	99	41.117	Dipodomys_ordii
FBgn0010247	Parp	86	60.484	ENSETEG00000013254	PARP1	86	60.484	Echinops_telfairi
FBgn0010247	Parp	98	39.980	ENSEBUG00000005820	parp1	99	40.321	Eptatretus_burgeri
FBgn0010247	Parp	98	41.235	ENSEASG00005013275	PARP1	98	41.907	Equus_asinus_asinus
FBgn0010247	Parp	99	41.200	ENSECAG00000019207	PARP1	99	41.691	Equus_caballus
FBgn0010247	Parp	99	40.585	ENSEEUG00000012253	PARP1	99	40.762	Erinaceus_europaeus
FBgn0010247	Parp	99	41.575	ENSELUG00000017336	parp1	99	41.990	Esox_lucius
FBgn0010247	Parp	97	41.123	ENSFCAG00000005777	PARP1	99	41.224	Felis_catus
FBgn0010247	Parp	96	40.793	ENSFALG00000011578	PARP1	99	41.104	Ficedula_albicollis
FBgn0010247	Parp	96	41.525	ENSFDAG00000017662	PARP1	99	41.625	Fukomys_damarensis
FBgn0010247	Parp	99	41.543	ENSFHEG00000001117	parp1	99	41.970	Fundulus_heteroclitus
FBgn0010247	Parp	99	42.085	ENSGMOG00000014929	parp1	99	42.365	Gadus_morhua
FBgn0010247	Parp	99	41.240	ENSGALG00000009228	PARP1	99	42.235	Gallus_gallus
FBgn0010247	Parp	99	41.552	ENSGAFG00000010450	parp1	99	41.879	Gambusia_affinis
FBgn0010247	Parp	99	41.061	ENSGACG00000011280	parp1	99	41.379	Gasterosteus_aculeatus
FBgn0010247	Parp	99	41.863	ENSGAGG00000010066	PARP1	99	42.311	Gopherus_agassizii
FBgn0010247	Parp	99	41.609	ENSGGOG00000006308	PARP1	99	41.708	Gorilla_gorilla
FBgn0010247	Parp	99	41.683	ENSHBUG00000010490	parp1	99	41.683	Haplochromis_burtoni
FBgn0010247	Parp	96	41.171	ENSHGLG00000003992	PARP1	93	41.271	Heterocephalus_glaber_female
FBgn0010247	Parp	96	41.171	ENSHGLG00100016965	PARP1	93	41.271	Heterocephalus_glaber_male
FBgn0010247	Parp	99	40.909	ENSHCOG00000011619	parp1	99	41.234	Hippocampus_comes
FBgn0010247	Parp	99	41.281	ENSIPUG00000020250	parp1	99	41.478	Ictalurus_punctatus
FBgn0010247	Parp	99	41.822	ENSSTOG00000016000	PARP1	99	41.920	Ictidomys_tridecemlineatus
FBgn0010247	Parp	99	41.609	ENSJJAG00000023497	Parp1	99	41.977	Jaculus_jaculus
FBgn0010247	Parp	99	40.972	ENSKMAG00000011627	parp1	99	40.972	Kryptolebias_marmoratus
FBgn0010247	Parp	99	41.107	ENSLBEG00000013376	parp1	99	41.601	Labrus_bergylta
FBgn0010247	Parp	54	51.327	ENSLACG00000002735	PARP1	99	40.909	Latimeria_chalumnae
FBgn0010247	Parp	99	41.502	ENSLOCG00000015798	parp1	99	41.601	Lepisosteus_oculatus
FBgn0010247	Parp	96	40.932	ENSLAFG00000007830	PARP1	99	41.033	Loxodonta_africana
FBgn0010247	Parp	99	41.904	ENSMFAG00000002526	PARP1	99	42.002	Macaca_fascicularis
FBgn0010247	Parp	99	41.904	ENSMMUG00000021820	PARP1	99	42.002	Macaca_mulatta
FBgn0010247	Parp	99	41.904	ENSMNEG00000034074	PARP1	99	42.002	Macaca_nemestrina
FBgn0010247	Parp	99	41.194	ENSMLEG00000012344	PARP1	99	41.292	Mandrillus_leucophaeus
FBgn0010247	Parp	99	41.107	ENSMAMG00000020652	parp1	99	41.535	Mastacembelus_armatus
FBgn0010247	Parp	99	41.584	ENSMZEG00005016907	parp1	99	41.584	Maylandia_zebra
FBgn0010247	Parp	96	40.635	ENSMGAG00000007760	PARP1	99	41.044	Meleagris_gallopavo
FBgn0010247	Parp	99	41.626	ENSMAUG00000008306	Parp1	99	41.724	Mesocricetus_auratus
FBgn0010247	Parp	99	40.000	ENSMICG00000017076	PARP1	99	40.098	Microcebus_murinus
FBgn0010247	Parp	99	41.650	ENSMOCG00000014315	Parp1	99	41.790	Microtus_ochrogaster
FBgn0010247	Parp	99	41.373	ENSMMOG00000015966	parp1	99	41.634	Mola_mola
FBgn0010247	Parp	99	42.033	ENSMODG00000006076	PARP1	99	42.074	Monodelphis_domestica
FBgn0010247	Parp	99	41.089	ENSMALG00000004057	parp1	99	41.089	Monopterus_albus
FBgn0010247	Parp	99	41.569	MGP_CAROLIEiJ_G0014978	Parp1	100	57.576	Mus_caroli
FBgn0010247	Parp	99	41.396	ENSMUSG00000026496	Parp1	99	57.576	Mus_musculus
FBgn0010247	Parp	99	41.396	MGP_SPRETEiJ_G0015777	Parp1	100	57.576	Mus_spretus
FBgn0010247	Parp	99	41.200	ENSMPUG00000004585	PARP1	99	41.691	Mustela_putorius_furo
FBgn0010247	Parp	72	53.012	ENSMLUG00000012285	PARP1	80	53.012	Myotis_lucifugus
FBgn0010247	Parp	99	41.650	ENSNGAG00000003885	Parp1	99	41.609	Nannospalax_galili
FBgn0010247	Parp	99	42.045	ENSNBRG00000017434	parp1	99	42.045	Neolamprologus_brichardi
FBgn0010247	Parp	94	52.865	ENSNLEG00000013905	PARP1	99	52.865	Nomascus_leucogenys
FBgn0010247	Parp	66	56.575	ENSMEUG00000007720	PARP1	86	56.575	Notamacropus_eugenii
FBgn0010247	Parp	99	41.217	ENSOPRG00000011722	PARP1	99	41.315	Ochotona_princeps
FBgn0010247	Parp	99	41.901	ENSODEG00000007424	PARP1	99	41.998	Octodon_degus
FBgn0010247	Parp	99	42.045	ENSONIG00000013486	parp1	99	41.996	Oreochromis_niloticus
FBgn0010247	Parp	96	41.439	ENSOANG00000001488	PARP1	99	41.776	Ornithorhynchus_anatinus
FBgn0010247	Parp	99	41.487	ENSOCUG00000017820	PARP1	99	41.740	Oryctolagus_cuniculus
FBgn0010247	Parp	99	40.909	ENSORLG00000013691	parp1	99	40.927	Oryzias_latipes
FBgn0010247	Parp	96	39.980	ENSORLG00020001074	parp1	98	40.488	Oryzias_latipes_hni
FBgn0010247	Parp	99	40.909	ENSORLG00015007090	parp1	99	41.026	Oryzias_latipes_hsok
FBgn0010247	Parp	99	41.366	ENSOGAG00000016206	PARP1	99	41.463	Otolemur_garnettii
FBgn0010247	Parp	99	41.895	ENSOARG00000000811	PARP1	99	41.895	Ovis_aries
FBgn0010247	Parp	99	41.511	ENSPPAG00000040862	PARP1	99	41.609	Pan_paniscus
FBgn0010247	Parp	96	40.505	ENSPPRG00000003528	PARP1	99	40.808	Panthera_pardus
FBgn0010247	Parp	94	37.672	ENSPTIG00000009102	PARP1	98	37.869	Panthera_tigris_altaica
FBgn0010247	Parp	99	41.511	ENSPTRG00000002049	PARP1	99	41.609	Pan_troglodytes
FBgn0010247	Parp	99	41.961	ENSPANG00000011198	PARP1	99	42.059	Papio_anubis
FBgn0010247	Parp	99	42.045	ENSPKIG00000006039	parp1	99	42.045	Paramormyrops_kingsleyae
FBgn0010247	Parp	96	41.075	ENSPSIG00000016374	PARP1	99	41.278	Pelodiscus_sinensis
FBgn0010247	Parp	99	40.476	ENSPMGG00000008936	parp1	99	40.476	Periophthalmus_magnuspinnatus
FBgn0010247	Parp	99	41.724	ENSPEMG00000020230	Parp1	99	41.822	Peromyscus_maniculatus_bairdii
FBgn0010247	Parp	99	41.790	ENSPCIG00000006436	PARP1	99	41.724	Phascolarctos_cinereus
FBgn0010247	Parp	99	41.315	ENSPFOG00000002342	parp1	99	41.315	Poecilia_formosa
FBgn0010247	Parp	99	41.379	ENSPLAG00000000909	parp1	99	41.806	Poecilia_latipinna
FBgn0010247	Parp	99	41.281	ENSPMEG00000013979	parp1	99	41.708	Poecilia_mexicana
FBgn0010247	Parp	99	41.519	ENSPREG00000001114	parp1	99	41.847	Poecilia_reticulata
FBgn0010247	Parp	96	41.200	ENSPPYG00000000164	PARP1	99	41.302	Pongo_abelii
FBgn0010247	Parp	99	41.471	ENSPCOG00000016918	PARP1	99	41.569	Propithecus_coquereli
FBgn0010247	Parp	80	62.319	ENSPVAG00000005543	PARP1	80	62.319	Pteropus_vampyrus
FBgn0010247	Parp	99	41.766	ENSPNYG00000009702	parp1	99	41.766	Pundamilia_nyererei
FBgn0010247	Parp	99	40.332	ENSPNAG00000002787	parp1	99	40.905	Pygocentrus_nattereri
FBgn0010247	Parp	99	40.824	ENSRNOG00000003084	Parp1	99	41.119	Rattus_norvegicus
FBgn0010247	Parp	99	42.100	ENSRBIG00000044893	PARP1	98	48.780	Rhinopithecus_bieti
FBgn0010247	Parp	99	42.100	ENSRROG00000029280	PARP1	98	48.780	Rhinopithecus_roxellana
FBgn0010247	Parp	99	33.905	ENSRROG00000040615	-	96	42.257	Rhinopithecus_roxellana
FBgn0010247	Parp	99	41.822	ENSSBOG00000010144	PARP1	99	41.920	Saimiri_boliviensis_boliviensis
FBgn0010247	Parp	96	41.337	ENSSHAG00000001991	PARP1	99	41.752	Sarcophilus_harrisii
FBgn0010247	Parp	99	42.308	ENSSFOG00015020017	parp1	99	42.266	Scleropages_formosus
FBgn0010247	Parp	99	41.708	ENSSMAG00000013799	parp1	99	42.100	Scophthalmus_maximus
FBgn0010247	Parp	99	40.846	ENSSDUG00000016626	parp1	99	41.240	Seriola_dumerili
FBgn0010247	Parp	99	40.945	ENSSLDG00000006384	parp1	99	41.339	Seriola_lalandi_dorsalis
FBgn0010247	Parp	99	40.909	ENSSPUG00000007790	PARP1	99	40.909	Sphenodon_punctatus
FBgn0010247	Parp	99	40.335	ENSSPAG00000019074	parp1	99	40.407	Stegastes_partitus
FBgn0010247	Parp	99	41.626	ENSSSCG00000023660	PARP1	99	41.847	Sus_scrofa
FBgn0010247	Parp	93	46.154	ENSTGUG00000004260	-	99	46.154	Taeniopygia_guttata
FBgn0010247	Parp	99	40.864	ENSTRUG00000014490	parp1	99	41.159	Takifugu_rubripes
FBgn0010247	Parp	99	40.909	ENSTNIG00000016384	parp1	99	40.909	Tetraodon_nigroviridis
FBgn0010247	Parp	81	53.402	ENSTBEG00000002364	PARP1	89	53.402	Tupaia_belangeri
FBgn0010247	Parp	99	38.469	ENSTTRG00000000188	PARP1	99	38.824	Tursiops_truncatus
FBgn0010247	Parp	96	40.609	ENSUAMG00000014388	PARP1	99	41.015	Ursus_americanus
FBgn0010247	Parp	96	37.372	ENSUMAG00000014555	PARP1	99	38.047	Ursus_maritimus
FBgn0010247	Parp	83	58.468	ENSVPAG00000011411	PARP1	82	58.468	Vicugna_pacos
FBgn0010247	Parp	96	40.571	ENSVVUG00000001655	PARP1	99	41.057	Vulpes_vulpes
FBgn0010247	Parp	99	41.188	ENSXETG00000022610	parp1	99	41.584	Xenopus_tropicalis
FBgn0010247	Parp	99	41.454	ENSXMAG00000003632	parp1	99	41.454	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003677	DNA binding	-	IEA	Function
GO:0003950	NAD+ ADP-ribosyltransferase activity	21873635.	IBA	Function
GO:0003950	NAD+ ADP-ribosyltransferase activity	17827147.	IDA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005694	chromosome	16219773.	IDA	Component
GO:0005700	polytene chromosome	12543974.	IDA	Component
GO:0005700	polytene chromosome	12543962.15273990.	TAS	Component
GO:0005703	polytene chromosome puff	12543974.	IDA	Component
GO:0005703	polytene chromosome puff	12543962.	TAS	Component
GO:0005719	nuclear euchromatin	12543974.	IDA	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005730	nucleolus	16219773.	IDA	Component
GO:0005730	nucleolus	12543962.15273990.	TAS	Component
GO:0006302	double-strand break repair	21873635.	IBA	Process
GO:0006355	regulation of transcription, DNA-templated	12543962.	TAS	Process
GO:0006471	protein ADP-ribosylation	12183365.	IMP	Process
GO:0006471	protein ADP-ribosylation	12543962.	TAS	Process
GO:0006963	positive regulation of antibacterial peptide biosynthetic process	12543974.	IMP	Process
GO:0007000	nucleolus organization	12183365.16219773.	IMP	Process
GO:0007552	metamorphosis	12543962.	TAS	Process
GO:0008069	dorsal/ventral axis specification, ovarian follicular epithelium	24069162.	IGI	Process
GO:0008270	zinc ion binding	-	IEA	Function
GO:0009303	rRNA transcription	12543962.	TAS	Process
GO:0015030	Cajal body	19229318.	IDA	Component
GO:0030576	Cajal body organization	19229318.	IMP	Process
GO:0035079	polytene chromosome puffing	12543962.15273990.	TAS	Process
GO:0035080	heat shock-mediated polytene chromosome puffing	12543974.	IEP	Process
GO:0035080	heat shock-mediated polytene chromosome puffing	12543974.	IMP	Process
GO:0035363	histone locus body	19229318.	IDA	Component
GO:0042393	histone binding	17827147.	IPI	Function
GO:0043484	regulation of RNA splicing	19346337.	IMP	Process
GO:0045087	innate immune response	12543974.	IMP	Process
GO:0051276	chromosome organization	12543962.	TAS	Process
GO:0051287	NAD binding	-	IEA	Function
GO:0051457	maintenance of protein location in nucleus	16219773.	IMP	Process
GO:0070212	protein poly-ADP-ribosylation	21873635.	IBA	Process
GO:1900182	positive regulation of protein localization to nucleus	24055367.	IMP	Process
GO:1990404	protein ADP-ribosylase activity	21873635.	IBA	Function