EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0010408 (Gene tree)
Gene ID: 39108
Gene Symbol: RpS9
Alias: -
Full Name: Ribosomal protein S9
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 1739 bases
Position: chr3L:9509793-9511531
Accession: FBgn0010408
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0076152	S4	PF01479.25	1e-10	1	1
FBpp0076154	S4	PF01479.25	1e-10	1	1
FBpp0309532	S4	PF01479.25	1e-10	1	1
FBpp0076153	S4	PF01479.25	1.9e-05	1	1
FBpp0076153	Ribosomal_S4	PF00163.19	1.3e-06	1	1
FBpp0076152	Ribosomal_S4	PF00163.19	2.2e-06	1	1
FBpp0076154	Ribosomal_S4	PF00163.19	2.2e-06	1	1
FBpp0309532	Ribosomal_S4	PF00163.19	2.2e-06	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0076424	-	917	-	FBpp0076153	137 (aa)	-	Q95RG1
FBtr0076425	-	706	-	FBpp0076154	195 (aa)	-	P55935
FBtr0342577	-	803	-	FBpp0309532	195 (aa)	-	P55935
FBtr0076423	-	734	-	FBpp0076152	195 (aa)	-	P55935

Gene Model

Click here to download FBgn0010408's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0010408's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0010408	RpS9	94	89.922	ENSG00000170889	RPS9	95	87.879	Homo_sapiens
FBgn0010408	RpS9	96	89.305	ENSAPOG00000016312	rps9	90	90.286	Acanthochromis_polyacanthus
FBgn0010408	RpS9	94	89.922	ENSAMEG00000004630	RPS9	92	89.844	Ailuropoda_melanoleuca
FBgn0010408	RpS9	96	89.305	ENSAOCG00000021159	rps9	90	90.286	Amphiprion_ocellaris
FBgn0010408	RpS9	96	89.305	ENSAPEG00000008214	rps9	90	90.286	Amphiprion_percula
FBgn0010408	RpS9	96	89.840	ENSATEG00000022661	rps9	90	90.857	Anabas_testudineus
FBgn0010408	RpS9	94	89.922	ENSACAG00000016566	RPS9	90	89.714	Anolis_carolinensis
FBgn0010408	RpS9	53	73.611	ENSANAG00000020343	-	89	73.611	Aotus_nancymaae
FBgn0010408	RpS9	94	89.922	ENSANAG00000004180	RPS9	95	87.879	Aotus_nancymaae
FBgn0010408	RpS9	96	89.305	ENSACLG00000021384	rps9	91	91.071	Astatotilapia_calliptera
FBgn0010408	RpS9	94	91.473	ENSAMXG00000010402	rps9	95	91.473	Astyanax_mexicanus
FBgn0010408	RpS9	94	89.922	ENSBTAG00000006487	RPS9	94	87.879	Bos_taurus
FBgn0010408	RpS9	98	79.104	WBGene00004478	rps-9	95	78.771	Caenorhabditis_elegans
FBgn0010408	RpS9	94	86.822	ENSCJAG00000017658	-	82	86.525	Callithrix_jacchus
FBgn0010408	RpS9	94	89.922	ENSCJAG00000001130	-	90	90.323	Callithrix_jacchus
FBgn0010408	RpS9	94	89.922	ENSCAFG00000002652	RPS9	90	89.714	Canis_familiaris
FBgn0010408	RpS9	94	89.922	ENSCAFG00020018329	RPS9	95	87.879	Canis_lupus_dingo
FBgn0010408	RpS9	94	89.922	ENSCHIG00000024085	RPS9	90	89.714	Capra_hircus
FBgn0010408	RpS9	94	85.271	ENSCHIG00000026324	-	90	85.271	Capra_hircus
FBgn0010408	RpS9	94	89.922	ENSTSYG00000012074	-	91	89.844	Carlito_syrichta
FBgn0010408	RpS9	64	88.710	ENSCAPG00000013312	RPS9	69	91.964	Cavia_aperea
FBgn0010408	RpS9	94	89.922	ENSCPOG00000020893	RPS9	92	89.844	Cavia_porcellus
FBgn0010408	RpS9	94	89.922	ENSCCAG00000007081	-	95	87.879	Cebus_capucinus
FBgn0010408	RpS9	94	89.922	ENSCATG00000029320	RPS9	95	87.879	Cercocebus_atys
FBgn0010408	RpS9	94	89.922	ENSCLAG00000000504	RPS9	92	89.844	Chinchilla_lanigera
FBgn0010408	RpS9	94	89.922	ENSCSAG00000018755	-	90	89.143	Chlorocebus_sabaeus
FBgn0010408	RpS9	92	90.503	ENSCPBG00000018251	RPS9	92	91.018	Chrysemys_picta_bellii
FBgn0010408	RpS9	94	89.922	ENSCING00000021248	-	91	90.173	Ciona_intestinalis
FBgn0010408	RpS9	93	88.976	ENSCSAVG00000003644	-	94	88.976	Ciona_savignyi
FBgn0010408	RpS9	94	89.922	ENSCANG00000036604	RPS9	95	88.636	Colobus_angolensis_palliatus
FBgn0010408	RpS9	94	72.932	ENSCANG00000036954	-	75	74.468	Colobus_angolensis_palliatus
FBgn0010408	RpS9	94	89.922	ENSCGRG00001001119	Rps9	94	88.550	Cricetulus_griseus_chok1gshd
FBgn0010408	RpS9	96	75.401	ENSCGRG00000000157	-	90	76.571	Cricetulus_griseus_crigri
FBgn0010408	RpS9	96	89.305	ENSCSEG00000018918	rps9	90	90.286	Cynoglossus_semilaevis
FBgn0010408	RpS9	96	89.305	ENSCVAG00000007999	rps9	90	90.286	Cyprinodon_variegatus
FBgn0010408	RpS9	94	89.922	ENSDARG00000011405	rps9	95	89.844	Danio_rerio
FBgn0010408	RpS9	94	89.922	ENSDNOG00000044158	RPS9	90	89.714	Dasypus_novemcinctus
FBgn0010408	RpS9	94	89.922	ENSDORG00000015828	Rps9	92	89.844	Dipodomys_ordii
FBgn0010408	RpS9	96	67.914	ENSETEG00000009696	RPS9	90	68.571	Echinops_telfairi
FBgn0010408	RpS9	94	89.922	ENSEBUG00000011539	rps9	90	88.571	Eptatretus_burgeri
FBgn0010408	RpS9	94	89.922	ENSECAG00000020316	RPS9	92	89.844	Equus_caballus
FBgn0010408	RpS9	96	89.840	ENSELUG00000015000	rps9	90	90.286	Esox_lucius
FBgn0010408	RpS9	94	89.922	ENSFCAG00000014048	RPS9	95	87.879	Felis_catus
FBgn0010408	RpS9	94	89.922	ENSFDAG00000007469	RPS9	92	89.844	Fukomys_damarensis
FBgn0010408	RpS9	96	89.305	ENSFHEG00000016569	rps9	90	90.286	Fundulus_heteroclitus
FBgn0010408	RpS9	96	89.305	ENSGMOG00000005074	rps9	90	90.286	Gadus_morhua
FBgn0010408	RpS9	96	89.305	ENSGAFG00000013201	rps9	90	90.286	Gambusia_affinis
FBgn0010408	RpS9	96	88.770	ENSGACG00000010761	rps9	94	89.231	Gasterosteus_aculeatus
FBgn0010408	RpS9	96	89.840	ENSGAGG00000002562	RPS9	93	90.698	Gopherus_agassizii
FBgn0010408	RpS9	94	89.922	ENSGGOG00000027839	-	95	87.879	Gorilla_gorilla
FBgn0010408	RpS9	91	87.200	ENSGGOG00000025031	-	78	87.200	Gorilla_gorilla
FBgn0010408	RpS9	96	85.027	ENSGGOG00000042271	-	90	87.429	Gorilla_gorilla
FBgn0010408	RpS9	96	77.540	ENSGGOG00000025810	-	90	78.857	Gorilla_gorilla
FBgn0010408	RpS9	96	89.305	ENSHBUG00000013399	rps9	90	90.286	Haplochromis_burtoni
FBgn0010408	RpS9	94	89.922	ENSHGLG00000017784	RPS9	94	88.550	Heterocephalus_glaber_female
FBgn0010408	RpS9	94	89.922	ENSHGLG00100003924	RPS9	94	88.550	Heterocephalus_glaber_male
FBgn0010408	RpS9	96	88.770	ENSHCOG00000020779	rps9	90	89.714	Hippocampus_comes
FBgn0010408	RpS9	94	89.922	ENSIPUG00000000061	rps9	90	90.286	Ictalurus_punctatus
FBgn0010408	RpS9	94	89.922	ENSSTOG00000020325	RPS9	92	89.844	Ictidomys_tridecemlineatus
FBgn0010408	RpS9	97	73.158	ENSJJAG00000015488	-	91	74.157	Jaculus_jaculus
FBgn0010408	RpS9	94	89.922	ENSJJAG00000015795	-	95	89.922	Jaculus_jaculus
FBgn0010408	RpS9	96	83.957	ENSJJAG00000013812	-	90	85.714	Jaculus_jaculus
FBgn0010408	RpS9	96	89.305	ENSKMAG00000005101	rps9	90	90.286	Kryptolebias_marmoratus
FBgn0010408	RpS9	96	89.305	ENSLBEG00000017125	rps9	90	90.286	Labrus_bergylta
FBgn0010408	RpS9	94	90.698	ENSLACG00000011099	RPS9	94	90.076	Latimeria_chalumnae
FBgn0010408	RpS9	96	67.380	ENSLOCG00000008007	rps9	90	66.286	Lepisosteus_oculatus
FBgn0010408	RpS9	94	89.922	ENSLAFG00000010760	RPS9	90	89.714	Loxodonta_africana
FBgn0010408	RpS9	94	89.922	ENSMFAG00000033649	RPS9	95	88.636	Macaca_fascicularis
FBgn0010408	RpS9	94	89.922	ENSMMUG00000022552	RPS9	90	89.714	Macaca_mulatta
FBgn0010408	RpS9	94	89.922	ENSMNEG00000013713	RPS9	95	88.636	Macaca_nemestrina
FBgn0010408	RpS9	94	89.922	ENSMLEG00000023735	RPS9	95	88.636	Mandrillus_leucophaeus
FBgn0010408	RpS9	96	89.305	ENSMAMG00000019474	rps9	90	90.286	Mastacembelus_armatus
FBgn0010408	RpS9	96	89.305	ENSMZEG00005016370	rps9	90	90.286	Maylandia_zebra
FBgn0010408	RpS9	94	89.922	ENSMAUG00000016938	Rps9	94	88.550	Mesocricetus_auratus
FBgn0010408	RpS9	94	89.922	ENSMICG00000014928	RPS9	92	89.844	Microcebus_murinus
FBgn0010408	RpS9	94	84.496	ENSMOCG00000006744	-	96	81.283	Microtus_ochrogaster
FBgn0010408	RpS9	94	89.922	ENSMOCG00000010762	Rps9	92	89.844	Microtus_ochrogaster
FBgn0010408	RpS9	94	89.922	ENSMOCG00000004350	-	89	89.714	Microtus_ochrogaster
FBgn0010408	RpS9	96	89.305	ENSMMOG00000016468	rps9	90	90.286	Mola_mola
FBgn0010408	RpS9	96	68.984	ENSMODG00000003974	RPS9	89	69.714	Monodelphis_domestica
FBgn0010408	RpS9	96	89.840	ENSMALG00000009363	rps9	90	90.857	Monopterus_albus
FBgn0010408	RpS9	94	89.922	MGP_CAROLIEiJ_G0029100	Rps9	95	89.922	Mus_caroli
FBgn0010408	RpS9	94	89.922	ENSMUSG00000006333	Rps9	95	89.922	Mus_musculus
FBgn0010408	RpS9	94	89.922	MGP_PahariEiJ_G0020969	Rps9	95	89.922	Mus_pahari
FBgn0010408	RpS9	94	89.922	MGP_SPRETEiJ_G0030153	Rps9	95	89.922	Mus_spretus
FBgn0010408	RpS9	94	84.615	ENSMPUG00000019169	-	90	82.955	Mustela_putorius_furo
FBgn0010408	RpS9	94	89.922	ENSMPUG00000010394	RPS9	90	89.714	Mustela_putorius_furo
FBgn0010408	RpS9	94	89.922	ENSMLUG00000016897	-	90	89.714	Myotis_lucifugus
FBgn0010408	RpS9	96	87.166	ENSMLUG00000002154	-	90	89.143	Myotis_lucifugus
FBgn0010408	RpS9	94	75.969	ENSNGAG00000017852	-	96	82.609	Nannospalax_galili
FBgn0010408	RpS9	94	89.922	ENSNGAG00000023394	Rps9	90	89.714	Nannospalax_galili
FBgn0010408	RpS9	96	89.305	ENSNBRG00000003450	rps9	90	90.286	Neolamprologus_brichardi
FBgn0010408	RpS9	94	89.922	ENSNLEG00000006314	RPS9	92	89.844	Nomascus_leucogenys
FBgn0010408	RpS9	94	84.496	ENSNLEG00000035027	-	92	83.846	Nomascus_leucogenys
FBgn0010408	RpS9	94	87.597	ENSNLEG00000018247	-	94	86.364	Nomascus_leucogenys
FBgn0010408	RpS9	94	89.922	ENSOPRG00000001628	-	90	89.714	Ochotona_princeps
FBgn0010408	RpS9	94	81.395	ENSODEG00000019411	-	90	81.034	Octodon_degus
FBgn0010408	RpS9	96	83.422	ENSODEG00000019680	-	90	85.143	Octodon_degus
FBgn0010408	RpS9	94	89.922	ENSODEG00000002087	-	92	89.844	Octodon_degus
FBgn0010408	RpS9	94	73.643	ENSODEG00000016631	-	85	75.000	Octodon_degus
FBgn0010408	RpS9	96	84.492	ENSODEG00000019010	-	90	86.286	Octodon_degus
FBgn0010408	RpS9	96	89.305	ENSONIG00000012752	rps9	90	90.286	Oreochromis_niloticus
FBgn0010408	RpS9	94	89.922	ENSOANG00000014748	-	95	89.922	Ornithorhynchus_anatinus
FBgn0010408	RpS9	96	89.305	ENSORLG00000011258	rps9	90	90.286	Oryzias_latipes
FBgn0010408	RpS9	96	89.305	ENSORLG00020007734	rps9	90	90.286	Oryzias_latipes_hni
FBgn0010408	RpS9	96	89.305	ENSORLG00015013498	rps9	92	89.231	Oryzias_latipes_hsok
FBgn0010408	RpS9	96	89.305	ENSOMEG00000010547	rps9	90	90.286	Oryzias_melastigma
FBgn0010408	RpS9	94	89.922	ENSOGAG00000006813	RPS9	90	89.714	Otolemur_garnettii
FBgn0010408	RpS9	94	89.922	ENSOARG00000002753	-	90	87.429	Ovis_aries
FBgn0010408	RpS9	94	86.822	ENSOARG00000010831	-	96	85.057	Ovis_aries
FBgn0010408	RpS9	94	89.922	ENSPPAG00000028401	RPS9	95	87.879	Pan_paniscus
FBgn0010408	RpS9	94	73.643	ENSPPAG00000043211	-	89	68.571	Pan_paniscus
FBgn0010408	RpS9	94	89.922	ENSPPRG00000011810	RPS9	95	87.879	Panthera_pardus
FBgn0010408	RpS9	96	77.099	ENSPTIG00000010169	RPS9	77	91.275	Panthera_tigris_altaica
FBgn0010408	RpS9	94	89.922	ENSPTRG00000011449	RPS9	95	87.879	Pan_troglodytes
FBgn0010408	RpS9	94	89.922	ENSPTRG00000050995	-	95	87.879	Pan_troglodytes
FBgn0010408	RpS9	94	87.597	ENSPTRG00000041697	-	89	83.333	Pan_troglodytes
FBgn0010408	RpS9	94	78.295	ENSPTRG00000045479	-	89	72.000	Pan_troglodytes
FBgn0010408	RpS9	96	72.727	ENSPANG00000011359	RPS9	89	73.714	Papio_anubis
FBgn0010408	RpS9	94	82.171	ENSPSIG00000005938	RPS9	90	84.000	Pelodiscus_sinensis
FBgn0010408	RpS9	96	89.305	ENSPMGG00000012078	rps9	90	90.286	Periophthalmus_magnuspinnatus
FBgn0010408	RpS9	94	89.922	ENSPEMG00000013302	-	94	88.550	Peromyscus_maniculatus_bairdii
FBgn0010408	RpS9	96	89.840	ENSPMAG00000000193	-	90	90.286	Petromyzon_marinus
FBgn0010408	RpS9	94	89.922	ENSPCIG00000023372	RPS9	90	89.143	Phascolarctos_cinereus
FBgn0010408	RpS9	96	88.830	ENSPFOG00000009299	rps9	90	89.773	Poecilia_formosa
FBgn0010408	RpS9	96	89.305	ENSPLAG00000012829	rps9	90	90.286	Poecilia_latipinna
FBgn0010408	RpS9	96	89.305	ENSPMEG00000017606	rps9	90	90.286	Poecilia_mexicana
FBgn0010408	RpS9	94	89.922	ENSPREG00000007924	rps9	95	89.922	Poecilia_reticulata
FBgn0010408	RpS9	94	89.922	ENSPPYG00000010377	RPS9	90	89.714	Pongo_abelii
FBgn0010408	RpS9	94	89.922	ENSPCAG00000012395	RPS9	91	89.535	Procavia_capensis
FBgn0010408	RpS9	94	89.922	ENSPCOG00000013987	RPS9	95	87.879	Propithecus_coquereli
FBgn0010408	RpS9	64	84.848	ENSPVAG00000015571	RPS9	58	89.130	Pteropus_vampyrus
FBgn0010408	RpS9	96	89.305	ENSPNYG00000002115	rps9	90	90.286	Pundamilia_nyererei
FBgn0010408	RpS9	96	89.305	ENSPNAG00000011249	rps9	90	90.286	Pygocentrus_nattereri
FBgn0010408	RpS9	94	89.922	ENSRNOG00000058909	Rps9l1	95	89.922	Rattus_norvegicus
FBgn0010408	RpS9	96	82.888	ENSRNOG00000050067	AABR07026058.1	90	84.571	Rattus_norvegicus
FBgn0010408	RpS9	94	86.822	ENSRNOG00000039203	AABR07040892.1	90	86.286	Rattus_norvegicus
FBgn0010408	RpS9	94	89.922	ENSRBIG00000041681	RPS9	95	88.636	Rhinopithecus_bieti
FBgn0010408	RpS9	94	84.496	ENSRBIG00000040750	-	82	84.496	Rhinopithecus_bieti
FBgn0010408	RpS9	96	77.540	ENSRBIG00000042902	-	90	78.857	Rhinopithecus_bieti
FBgn0010408	RpS9	96	70.053	ENSRROG00000030184	-	88	70.857	Rhinopithecus_roxellana
FBgn0010408	RpS9	94	89.922	ENSRROG00000036731	RPS9	95	88.636	Rhinopithecus_roxellana
FBgn0010408	RpS9	94	84.496	ENSRROG00000043910	-	83	84.615	Rhinopithecus_roxellana
FBgn0010408	RpS9	96	72.727	YBR189W	RPS9B	89	72.989	Saccharomyces_cerevisiae
FBgn0010408	RpS9	96	71.970	YPL081W	RPS9A	88	72.414	Saccharomyces_cerevisiae
FBgn0010408	RpS9	96	63.298	ENSSBOG00000024187	-	89	64.205	Saimiri_boliviensis_boliviensis
FBgn0010408	RpS9	94	89.922	ENSSBOG00000015501	-	95	87.879	Saimiri_boliviensis_boliviensis
FBgn0010408	RpS9	94	89.922	ENSSFOG00015000650	rps9	90	90.286	Scleropages_formosus
FBgn0010408	RpS9	96	89.305	ENSSMAG00000013149	rps9	90	90.286	Scophthalmus_maximus
FBgn0010408	RpS9	96	89.305	ENSSDUG00000008689	rps9	90	90.286	Seriola_dumerili
FBgn0010408	RpS9	96	89.305	ENSSLDG00000022240	rps9	90	90.286	Seriola_lalandi_dorsalis
FBgn0010408	RpS9	94	89.922	ENSSARG00000005909	RPS9	90	89.714	Sorex_araneus
FBgn0010408	RpS9	96	83.957	ENSSARG00000010223	-	90	85.714	Sorex_araneus
FBgn0010408	RpS9	94	89.922	ENSSPUG00000008604	RPS9	90	89.714	Sphenodon_punctatus
FBgn0010408	RpS9	96	89.305	ENSSPAG00000016660	rps9	90	90.286	Stegastes_partitus
FBgn0010408	RpS9	94	89.922	ENSSSCG00000029785	RPS9	95	87.879	Sus_scrofa
FBgn0010408	RpS9	96	89.840	ENSTRUG00000015896	rps9	90	90.857	Takifugu_rubripes
FBgn0010408	RpS9	96	77.540	ENSTBEG00000003585	RPS9	90	78.857	Tupaia_belangeri
FBgn0010408	RpS9	90	88.000	ENSTTRG00000006572	RPS9	93	90.184	Tursiops_truncatus
FBgn0010408	RpS9	94	89.922	ENSUMAG00000010897	RPS9	95	87.879	Ursus_maritimus
FBgn0010408	RpS9	94	89.922	ENSVVUG00000008202	-	90	89.714	Vulpes_vulpes
FBgn0010408	RpS9	94	90.698	ENSXETG00000009030	rps9	90	90.286	Xenopus_tropicalis
FBgn0010408	RpS9	96	89.305	ENSXMAG00000012175	rps9	90	90.286	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000228	nuclear chromosome	23638349.	IDA	Component
GO:0002181	cytoplasmic translation	16889426.	IC	Process
GO:0002181	cytoplasmic translation	17927810.	TAS	Process
GO:0003735	structural constituent of ribosome	16889426.	HDA	Function
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	17927810.	TAS	Function
GO:0005730	nucleolus	23638349.	IDA	Component
GO:0005737	cytoplasm	23638349.	IDA	Component
GO:0005829	cytosol	25294944.	HDA	Component
GO:0019843	rRNA binding	21873635.	IBA	Function
GO:0022626	cytosolic ribosome	16889426.	HDA	Component
GO:0022627	cytosolic small ribosomal subunit	21873635.	IBA	Component
GO:0022627	cytosolic small ribosomal subunit	17927810.	TAS	Component
GO:0045903	positive regulation of translational fidelity	21873635.	IBA	Process