EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0010438 (Gene tree)
Gene ID: 41968
Gene Symbol: mtSSB
Alias: -
Full Name: mitochondrial single stranded DNA-binding protein
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 1057
Position: chr3R: 16204194-16205250
Accession: FBgn0010438
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0083277	-	575	-	FBpp0082729	146 (aa)	-	P54622

Gene Model

Click here to download FBgn0010438's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0010438's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0010438	mtSSB	70	35.238	WBGene00019800	mtss-1	61	35.238	Caenorhabditis_elegans
FBgn0010438	mtSSB	80	42.742	ENSDARG00000039350	ssbp1	80	43.590	Danio_rerio
FBgn0010438	mtSSB	92	41.135	ENSG00000106028	SSBP1	81	44.545	Homo_sapiens
FBgn0010438	mtSSB	81	40.800	ENSMUSG00000029911	Ssbp1	79	42.735	Mus_musculus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000002	mitochondrial genome maintenance	11294889.	IDA	Process
GO:0000002	mitochondrial genome maintenance	11294889.	IMP	Process
GO:0000262	mitochondrial chromosome	11294889.	IDA	Component
GO:0003697	single-stranded DNA binding	21873635.	IBA	Function
GO:0003697	single-stranded DNA binding	8206370.	IDA	Function
GO:0003697	single-stranded DNA binding	-	ISS	Function
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	7673145.	IDA	Component
GO:0005739	mitochondrion	-	ISS	Component
GO:0006264	mitochondrial DNA replication	21873635.	IBA	Process
GO:0006264	mitochondrial DNA replication	11294889.	IDA	Process
GO:0009295	nucleoid	21873635.	IBA	Component
GO:0042645	mitochondrial nucleoid	21873635.	IBA	Component
GO:0051096	positive regulation of helicase activity	21873635.	IBA	Process