EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0010747 (Gene tree)
Gene ID: 38593
Gene Symbol: Srp54k
Alias: -
Full Name: Signal recognition particle protein 54k
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 2100 bases
Position: chr3L:5152678-5154777
Accession: FBgn0010747
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0076872	SRP54	PF00448.22	3.2e-76	1	1
FBpp0076872	SRP54_N	PF02881.19	2.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0077169	-	2015	-	FBpp0076872	508 (aa)	-	Q8T3P8

Gene Model

Click here to download FBgn0010747's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0010747's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0010747	Srp54k	98	77.108	ENSG00000100883	SRP54	100	81.395	Homo_sapiens
FBgn0010747	Srp54k	98	78.514	ENSAPOG00000011314	srp54	96	78.969	Acanthochromis_polyacanthus
FBgn0010747	Srp54k	98	77.108	ENSAMEG00000015544	SRP54	96	77.526	Ailuropoda_melanoleuca
FBgn0010747	Srp54k	88	78.842	ENSACIG00000022831	srp54	97	78.842	Amphilophus_citrinellus
FBgn0010747	Srp54k	98	78.514	ENSAOCG00000019401	srp54	96	78.969	Amphiprion_ocellaris
FBgn0010747	Srp54k	98	78.514	ENSAPEG00000001977	srp54	96	78.969	Amphiprion_percula
FBgn0010747	Srp54k	98	78.715	ENSATEG00000013877	srp54	96	79.175	Anabas_testudineus
FBgn0010747	Srp54k	93	77.637	ENSAPLG00000010125	SRP54	95	77.637	Anas_platyrhynchos
FBgn0010747	Srp54k	84	74.005	ENSACAG00000010631	-	96	74.396	Anolis_carolinensis
FBgn0010747	Srp54k	98	76.506	ENSACAG00000002103	-	96	76.907	Anolis_carolinensis
FBgn0010747	Srp54k	64	64.545	ENSACAG00000001124	-	92	66.124	Anolis_carolinensis
FBgn0010747	Srp54k	98	77.108	ENSANAG00000022133	SRP54	96	77.526	Aotus_nancymaae
FBgn0010747	Srp54k	98	78.514	ENSACLG00000015866	srp54	96	78.969	Astatotilapia_calliptera
FBgn0010747	Srp54k	98	79.317	ENSAMXG00000032669	SRP54	96	79.794	Astyanax_mexicanus
FBgn0010747	Srp54k	98	77.108	ENSBTAG00000019085	SRP54	96	77.526	Bos_taurus
FBgn0010747	Srp54k	96	69.796	WBGene00009012	F21D5.7	98	69.877	Caenorhabditis_elegans
FBgn0010747	Srp54k	98	77.108	ENSCJAG00000006581	SRP54	96	77.526	Callithrix_jacchus
FBgn0010747	Srp54k	98	77.108	ENSCAFG00000013331	SRP54	96	77.526	Canis_familiaris
FBgn0010747	Srp54k	98	77.108	ENSCAFG00020023427	SRP54	96	77.526	Canis_lupus_dingo
FBgn0010747	Srp54k	98	77.108	ENSCHIG00000026345	SRP54	96	77.526	Capra_hircus
FBgn0010747	Srp54k	94	68.344	ENSTSYG00000035333	-	94	68.344	Carlito_syrichta
FBgn0010747	Srp54k	98	77.108	ENSTSYG00000002680	-	96	77.526	Carlito_syrichta
FBgn0010747	Srp54k	93	51.935	ENSCAPG00000008780	SRP54	100	51.935	Cavia_aperea
FBgn0010747	Srp54k	98	76.707	ENSCPOG00000003691	SRP54	96	77.113	Cavia_porcellus
FBgn0010747	Srp54k	84	74.473	ENSCCAG00000024179	SRP54	95	77.000	Cebus_capucinus
FBgn0010747	Srp54k	98	77.108	ENSCATG00000034083	SRP54	96	77.526	Cercocebus_atys
FBgn0010747	Srp54k	98	77.108	ENSCLAG00000015076	SRP54	96	77.526	Chinchilla_lanigera
FBgn0010747	Srp54k	98	77.108	ENSCSAG00000015575	SRP54	96	77.526	Chlorocebus_sabaeus
FBgn0010747	Srp54k	95	68.191	ENSCHOG00000008986	SRP54	100	68.191	Choloepus_hoffmanni
FBgn0010747	Srp54k	98	77.108	ENSCPBG00000026195	SRP54	96	77.526	Chrysemys_picta_bellii
FBgn0010747	Srp54k	96	77.551	ENSCING00000007380	-	97	77.732	Ciona_intestinalis
FBgn0010747	Srp54k	98	77.108	ENSCANG00000028532	SRP54	96	77.526	Colobus_angolensis_palliatus
FBgn0010747	Srp54k	98	77.510	ENSCGRG00001009525	-	96	77.938	Cricetulus_griseus_chok1gshd
FBgn0010747	Srp54k	76	80.990	ENSCGRG00000009453	-	86	81.283	Cricetulus_griseus_crigri
FBgn0010747	Srp54k	98	78.313	ENSCSEG00000012392	srp54	96	78.763	Cynoglossus_semilaevis
FBgn0010747	Srp54k	98	78.514	ENSCVAG00000010395	srp54	96	78.969	Cyprinodon_variegatus
FBgn0010747	Srp54k	98	78.916	ENSDARG00000098367	srp54	96	79.381	Danio_rerio
FBgn0010747	Srp54k	98	77.108	ENSDNOG00000032525	SRP54	96	77.526	Dasypus_novemcinctus
FBgn0010747	Srp54k	89	69.027	ENSDORG00000005159	-	98	68.514	Dipodomys_ordii
FBgn0010747	Srp54k	98	77.108	ENSETEG00000016307	-	96	77.526	Echinops_telfairi
FBgn0010747	Srp54k	80	45.455	ENSETEG00000012102	-	96	45.455	Echinops_telfairi
FBgn0010747	Srp54k	98	78.672	ENSEBUG00000009437	-	96	78.969	Eptatretus_burgeri
FBgn0010747	Srp54k	98	77.108	ENSEASG00005002057	SRP54	96	77.526	Equus_asinus_asinus
FBgn0010747	Srp54k	97	77.374	ENSECAG00000018042	SRP54	96	77.526	Equus_caballus
FBgn0010747	Srp54k	98	63.655	ENSEEUG00000001511	SRP54	96	63.711	Erinaceus_europaeus
FBgn0010747	Srp54k	98	78.916	ENSELUG00000003395	srp54	96	79.381	Esox_lucius
FBgn0010747	Srp54k	98	77.309	ENSFCAG00000032033	SRP54	96	77.732	Felis_catus
FBgn0010747	Srp54k	98	76.908	ENSFALG00000005995	SRP54	96	77.320	Ficedula_albicollis
FBgn0010747	Srp54k	98	77.108	ENSFDAG00000016767	SRP54	97	77.526	Fukomys_damarensis
FBgn0010747	Srp54k	98	78.514	ENSFHEG00000004263	srp54	96	78.969	Fundulus_heteroclitus
FBgn0010747	Srp54k	93	74.098	ENSGMOG00000011391	srp54	96	74.454	Gadus_morhua
FBgn0010747	Srp54k	98	76.908	ENSGALG00000023135	SRP54	96	77.320	Gallus_gallus
FBgn0010747	Srp54k	98	78.715	ENSGAFG00000011586	srp54	96	79.175	Gambusia_affinis
FBgn0010747	Srp54k	98	78.514	ENSGACG00000004181	srp54	100	79.493	Gasterosteus_aculeatus
FBgn0010747	Srp54k	98	77.108	ENSGAGG00000014766	SRP54	96	77.526	Gopherus_agassizii
FBgn0010747	Srp54k	98	77.108	ENSGGOG00000002926	SRP54	96	77.526	Gorilla_gorilla
FBgn0010747	Srp54k	98	78.514	ENSHBUG00000005678	srp54	96	78.969	Haplochromis_burtoni
FBgn0010747	Srp54k	98	77.108	ENSHGLG00000002850	SRP54	96	77.526	Heterocephalus_glaber_female
FBgn0010747	Srp54k	98	53.707	ENSHGLG00100007281	-	95	53.498	Heterocephalus_glaber_male
FBgn0010747	Srp54k	98	77.108	ENSHGLG00100005263	SRP54	96	77.526	Heterocephalus_glaber_male
FBgn0010747	Srp54k	98	79.116	ENSHCOG00000021127	srp54	96	79.588	Hippocampus_comes
FBgn0010747	Srp54k	98	79.317	ENSIPUG00000001420	srp54	96	79.794	Ictalurus_punctatus
FBgn0010747	Srp54k	98	77.108	ENSSTOG00000016023	SRP54	96	77.526	Ictidomys_tridecemlineatus
FBgn0010747	Srp54k	85	61.290	ENSJJAG00000016404	-	95	61.283	Jaculus_jaculus
FBgn0010747	Srp54k	98	73.293	ENSJJAG00000013417	-	96	73.608	Jaculus_jaculus
FBgn0010747	Srp54k	98	79.317	ENSKMAG00000007707	srp54	96	79.794	Kryptolebias_marmoratus
FBgn0010747	Srp54k	98	78.514	ENSLBEG00000021122	srp54	96	78.969	Labrus_bergylta
FBgn0010747	Srp54k	98	78.514	ENSLBEG00000018690	srp54	96	78.969	Labrus_bergylta
FBgn0010747	Srp54k	98	78.112	ENSLACG00000017890	SRP54	96	78.557	Latimeria_chalumnae
FBgn0010747	Srp54k	98	78.916	ENSLOCG00000009440	srp54	96	79.381	Lepisosteus_oculatus
FBgn0010747	Srp54k	98	77.108	ENSLAFG00000012007	SRP54	96	77.526	Loxodonta_africana
FBgn0010747	Srp54k	98	77.108	ENSMFAG00000044371	SRP54	96	77.526	Macaca_fascicularis
FBgn0010747	Srp54k	98	77.108	ENSMMUG00000015073	FAM177A1	96	77.526	Macaca_mulatta
FBgn0010747	Srp54k	98	77.108	ENSMNEG00000006947	SRP54	96	77.526	Macaca_nemestrina
FBgn0010747	Srp54k	98	77.108	ENSMLEG00000042251	SRP54	96	77.526	Mandrillus_leucophaeus
FBgn0010747	Srp54k	98	78.514	ENSMAMG00000004803	srp54	96	78.969	Mastacembelus_armatus
FBgn0010747	Srp54k	98	78.514	ENSMZEG00005027528	srp54	96	78.969	Maylandia_zebra
FBgn0010747	Srp54k	98	73.400	ENSMGAG00000012481	SRP54	96	73.717	Meleagris_gallopavo
FBgn0010747	Srp54k	98	77.309	ENSMAUG00000014447	-	96	77.732	Mesocricetus_auratus
FBgn0010747	Srp54k	98	77.108	ENSMICG00000010270	SRP54	96	77.526	Microcebus_murinus
FBgn0010747	Srp54k	85	77.189	ENSMOCG00000000948	-	96	77.672	Microtus_ochrogaster
FBgn0010747	Srp54k	89	77.313	ENSMMOG00000020303	srp54	99	77.313	Mola_mola
FBgn0010747	Srp54k	98	77.108	ENSMODG00000023150	-	96	77.526	Monodelphis_domestica
FBgn0010747	Srp54k	98	77.108	ENSMODG00000012925	-	96	77.526	Monodelphis_domestica
FBgn0010747	Srp54k	87	80.090	ENSMALG00000009163	srp54	98	80.090	Monopterus_albus
FBgn0010747	Srp54k	98	77.309	MGP_CAROLIEiJ_G0017754	-	96	77.732	Mus_caroli
FBgn0010747	Srp54k	98	77.309	ENSMUSG00000073079	Srp54a	100	79.091	Mus_musculus
FBgn0010747	Srp54k	98	77.309	ENSMUSG00000112449	Srp54b	96	77.732	Mus_musculus
FBgn0010747	Srp54k	98	76.908	ENSMUSG00000079108	Srp54c	96	77.320	Mus_musculus
FBgn0010747	Srp54k	98	77.309	MGP_PahariEiJ_G0029510	-	96	77.732	Mus_pahari
FBgn0010747	Srp54k	98	77.108	ENSMPUG00000016302	SRP54	96	77.526	Mustela_putorius_furo
FBgn0010747	Srp54k	98	76.707	ENSMLUG00000008958	SRP54	96	77.113	Myotis_lucifugus
FBgn0010747	Srp54k	98	69.478	ENSNGAG00000019806	-	96	69.691	Nannospalax_galili
FBgn0010747	Srp54k	85	78.341	ENSNBRG00000006000	srp54	96	78.860	Neolamprologus_brichardi
FBgn0010747	Srp54k	98	77.108	ENSNLEG00000003496	SRP54	96	77.526	Nomascus_leucogenys
FBgn0010747	Srp54k	66	83.929	ENSMEUG00000000138	-	76	83.929	Notamacropus_eugenii
FBgn0010747	Srp54k	56	77.143	ENSOPRG00000014502	-	56	77.143	Ochotona_princeps
FBgn0010747	Srp54k	98	77.108	ENSODEG00000004865	SRP54	96	77.526	Octodon_degus
FBgn0010747	Srp54k	98	78.514	ENSONIG00000011768	srp54	96	78.969	Oreochromis_niloticus
FBgn0010747	Srp54k	98	77.108	ENSOANG00000014051	SRP54	96	77.526	Ornithorhynchus_anatinus
FBgn0010747	Srp54k	98	76.506	ENSOCUG00000007838	SRP54	96	76.907	Oryctolagus_cuniculus
FBgn0010747	Srp54k	98	78.715	ENSORLG00000010027	srp54	96	79.175	Oryzias_latipes
FBgn0010747	Srp54k	98	78.715	ENSORLG00020001878	srp54	96	79.175	Oryzias_latipes_hni
FBgn0010747	Srp54k	98	78.715	ENSORLG00015021866	srp54	96	79.175	Oryzias_latipes_hsok
FBgn0010747	Srp54k	98	78.916	ENSOMEG00000020952	srp54	96	79.381	Oryzias_melastigma
FBgn0010747	Srp54k	98	77.108	ENSOGAG00000012188	SRP54	96	77.526	Otolemur_garnettii
FBgn0010747	Srp54k	98	77.108	ENSOARG00000007160	SRP54	96	77.526	Ovis_aries
FBgn0010747	Srp54k	98	77.108	ENSPPAG00000017434	SRP54	96	77.526	Pan_paniscus
FBgn0010747	Srp54k	98	76.707	ENSPPRG00000014047	SRP54	96	77.113	Panthera_pardus
FBgn0010747	Srp54k	98	77.309	ENSPTIG00000000744	SRP54	92	77.732	Panthera_tigris_altaica
FBgn0010747	Srp54k	98	77.108	ENSPTRG00000006259	FAM177A1	96	77.526	Pan_troglodytes
FBgn0010747	Srp54k	98	77.108	ENSPANG00000023853	SRP54	96	77.526	Papio_anubis
FBgn0010747	Srp54k	98	79.116	ENSPKIG00000001953	srp54	96	79.588	Paramormyrops_kingsleyae
FBgn0010747	Srp54k	98	76.908	ENSPSIG00000006476	SRP54	96	77.320	Pelodiscus_sinensis
FBgn0010747	Srp54k	91	77.391	ENSPMGG00000004127	srp54	99	77.391	Periophthalmus_magnuspinnatus
FBgn0010747	Srp54k	86	81.481	ENSPEMG00000019634	-	93	81.481	Peromyscus_maniculatus_bairdii
FBgn0010747	Srp54k	98	79.074	ENSPMAG00000006078	-	96	79.588	Petromyzon_marinus
FBgn0010747	Srp54k	98	77.108	ENSPCIG00000016175	SRP54	96	77.526	Phascolarctos_cinereus
FBgn0010747	Srp54k	98	78.715	ENSPFOG00000008870	srp54	96	79.175	Poecilia_formosa
FBgn0010747	Srp54k	98	78.715	ENSPLAG00000009889	srp54	96	79.175	Poecilia_latipinna
FBgn0010747	Srp54k	98	78.715	ENSPMEG00000008601	srp54	96	79.175	Poecilia_mexicana
FBgn0010747	Srp54k	98	78.715	ENSPREG00000004505	srp54	96	79.175	Poecilia_reticulata
FBgn0010747	Srp54k	98	73.293	ENSPPYG00000005739	SRP54	96	73.608	Pongo_abelii
FBgn0010747	Srp54k	98	74.297	ENSPCAG00000006268	SRP54	96	74.639	Procavia_capensis
FBgn0010747	Srp54k	98	75.952	ENSPCOG00000022473	SRP54	96	76.337	Propithecus_coquereli
FBgn0010747	Srp54k	62	80.631	ENSPVAG00000010056	SRP54	79	81.132	Pteropus_vampyrus
FBgn0010747	Srp54k	98	78.514	ENSPNYG00000009717	srp54	96	78.969	Pundamilia_nyererei
FBgn0010747	Srp54k	98	79.116	ENSPNAG00000008544	srp54	96	79.588	Pygocentrus_nattereri
FBgn0010747	Srp54k	98	77.309	ENSRNOG00000032776	Srp54a	96	77.732	Rattus_norvegicus
FBgn0010747	Srp54k	98	77.108	ENSRROG00000041292	SRP54	96	77.526	Rhinopithecus_roxellana
FBgn0010747	Srp54k	83	51.963	YPR088C	SRP54	79	51.963	Saccharomyces_cerevisiae
FBgn0010747	Srp54k	92	76.923	ENSSBOG00000035145	SRP54	96	77.363	Saimiri_boliviensis_boliviensis
FBgn0010747	Srp54k	66	75.668	ENSSHAG00000000671	SRP54	94	76.235	Sarcophilus_harrisii
FBgn0010747	Srp54k	98	79.116	ENSSFOG00015013920	srp54	96	79.588	Scleropages_formosus
FBgn0010747	Srp54k	98	74.053	ENSSMAG00000002441	srp54	89	79.368	Scophthalmus_maximus
FBgn0010747	Srp54k	98	78.514	ENSSDUG00000018586	srp54	96	78.969	Seriola_dumerili
FBgn0010747	Srp54k	98	78.514	ENSSLDG00000010476	srp54	96	78.969	Seriola_lalandi_dorsalis
FBgn0010747	Srp54k	98	77.108	ENSSARG00000002744	SRP54	96	77.526	Sorex_araneus
FBgn0010747	Srp54k	98	77.108	ENSSPUG00000013101	SRP54	96	77.526	Sphenodon_punctatus
FBgn0010747	Srp54k	98	78.514	ENSSPAG00000002354	srp54	96	78.969	Stegastes_partitus
FBgn0010747	Srp54k	98	77.108	ENSSSCG00000001955	SRP54	96	77.526	Sus_scrofa
FBgn0010747	Srp54k	93	77.637	ENSTGUG00000011945	-	95	77.637	Taeniopygia_guttata
FBgn0010747	Srp54k	99	78.443	ENSTRUG00000007057	srp54	96	79.175	Takifugu_rubripes
FBgn0010747	Srp54k	99	78.244	ENSTNIG00000002589	srp54	96	78.969	Tetraodon_nigroviridis
FBgn0010747	Srp54k	87	70.295	ENSTBEG00000011409	SRP54	96	70.561	Tupaia_belangeri
FBgn0010747	Srp54k	98	69.478	ENSTTRG00000000928	SRP54	96	69.691	Tursiops_truncatus
FBgn0010747	Srp54k	52	80.153	ENSUAMG00000012385	SRP54	100	80.153	Ursus_americanus
FBgn0010747	Srp54k	98	77.108	ENSUMAG00000011234	SRP54	96	77.526	Ursus_maritimus
FBgn0010747	Srp54k	93	77.637	ENSVPAG00000005668	SRP54	100	77.426	Vicugna_pacos
FBgn0010747	Srp54k	98	77.108	ENSVVUG00000019962	SRP54	96	77.526	Vulpes_vulpes
FBgn0010747	Srp54k	98	67.066	ENSXETG00000012290	srp54	96	67.213	Xenopus_tropicalis
FBgn0010747	Srp54k	87	79.864	ENSXCOG00000004658	srp54	96	79.864	Xiphophorus_couchianus
FBgn0010747	Srp54k	98	78.715	ENSXMAG00000018315	srp54	96	79.175	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003924	GTPase activity	-	IEA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0006614	SRP-dependent cotranslational protein targeting to membrane	-	IEA	Process
GO:0008312	7S RNA binding	-	IEA	Function
GO:0048500	signal recognition particle	-	IEA	Component