EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
FBgn0011272 (Gene tree)
Gene ID
34329
Gene Symbol
RpL13
Alias
-
Full Name
Ribosomal protein L13
Gene Type
protein_coding
Species
Drosophila_melanogaster
Status
putative
Strand
Plus strand
Length
1333 bases
Position
chr2L:9967313-9968645
Accession
FBgn0011272
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
FBpp0079484Ribosomal_L13ePF01294.181.4e-7511
FBpp0099517Ribosomal_L13ePF01294.181.4e-7511
FBpp0302626Ribosomal_L13ePF01294.181.4e-7511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
FBtr0079888-791-FBpp0079484218 (aa)-P41126
FBtr0310482-1186-FBpp0302626218 (aa)-P41126
FBtr0100164-774-FBpp0099517218 (aa)-P41126
Gene Model
Click here to download FBgn0011272's gene model file
Protein-Protein Interaction (PPI)

Clik here to download FBgn0011272's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
FBgn0011272RpL139363.366ENSG00000167526RPL139667.769Homo_sapiens
FBgn0011272RpL139363.366ENSAPOG00000010933rpl139563.366Acanthochromis_polyacanthus
FBgn0011272RpL139351.980ENSAMEG00000001111RPL139554.187Ailuropoda_melanoleuca
FBgn0011272RpL139363.366ENSACIG00000000422rpl139563.366Amphilophus_citrinellus
FBgn0011272RpL139363.366ENSAOCG00000014635rpl139563.366Amphiprion_ocellaris
FBgn0011272RpL139363.366ENSAPEG00000011271rpl139563.366Amphiprion_percula
FBgn0011272RpL139363.366ENSATEG00000004902rpl139563.366Anabas_testudineus
FBgn0011272RpL139363.861ENSACAG00000017072RPL139563.861Anolis_carolinensis
FBgn0011272RpL139364.356ENSANAG00000030539RPL139564.356Aotus_nancymaae
FBgn0011272RpL139362.871ENSACLG00000001642rpl139562.871Astatotilapia_calliptera
FBgn0011272RpL139361.650ENSAMXG00000006495rpl139561.650Astyanax_mexicanus
FBgn0011272RpL139364.851ENSBTAG00000012044RPL136964.851Bos_taurus
FBgn0011272RpL139357.921ENSBTAG00000033143-9557.921Bos_taurus
FBgn0011272RpL139353.465WBGene00004425rpl-139753.465Caenorhabditis_elegans
FBgn0011272RpL139363.861ENSCJAG00000016268-9563.861Callithrix_jacchus
FBgn0011272RpL139364.356ENSCJAG00000009672-9564.356Callithrix_jacchus
FBgn0011272RpL139364.356ENSCAFG00000019840RPL139564.356Canis_familiaris
FBgn0011272RpL138442.487ENSCAFG00000002388-10042.487Canis_familiaris
FBgn0011272RpL138750.265ENSCAFG00020024795-8650.265Canis_lupus_dingo
FBgn0011272RpL139364.356ENSCAFG00020005125RPL139564.356Canis_lupus_dingo
FBgn0011272RpL139060.406ENSCHIG00000017227-8560.406Capra_hircus
FBgn0011272RpL139353.960ENSCHIG00000026795-8753.960Capra_hircus
FBgn0011272RpL139364.851ENSCHIG00000001441-9564.851Capra_hircus
FBgn0011272RpL139363.861ENSTSYG00000027423RPL139563.861Carlito_syrichta
FBgn0011272RpL139364.356ENSCPOG00000027348RPL139564.356Cavia_porcellus
FBgn0011272RpL139364.356ENSCCAG00000024248RPL139564.356Cebus_capucinus
FBgn0011272RpL139250.500ENSCATG00000038806-9150.500Cercocebus_atys
FBgn0011272RpL139364.356ENSCATG00000042426RPL139564.356Cercocebus_atys
FBgn0011272RpL139364.356ENSCLAG00000003801RPL139564.356Chinchilla_lanigera
FBgn0011272RpL139363.861ENSCSAG00000000476-9563.861Chlorocebus_sabaeus
FBgn0011272RpL139362.871ENSCPBG00000013618RPL139562.871Chrysemys_picta_bellii
FBgn0011272RpL139859.813ENSCING00000002582-9559.813Ciona_intestinalis
FBgn0011272RpL139258.209ENSCSAVG00000007075-9861.215Ciona_savignyi
FBgn0011272RpL136363.768ENSCANG00000028258RPL137463.768Colobus_angolensis_palliatus
FBgn0011272RpL138352.174ENSCGRG00001008381-9552.174Cricetulus_griseus_chok1gshd
FBgn0011272RpL139350.495ENSCGRG00001023328-9550.495Cricetulus_griseus_chok1gshd
FBgn0011272RpL139363.861ENSCGRG00001022563Rpl139563.861Cricetulus_griseus_chok1gshd
FBgn0011272RpL138352.973ENSCGRG00000016503-10052.973Cricetulus_griseus_crigri
FBgn0011272RpL139363.366ENSCGRG00000014556Rpl139563.366Cricetulus_griseus_crigri
FBgn0011272RpL139364.356ENSCSEG00000008346rpl139564.356Cynoglossus_semilaevis
FBgn0011272RpL139365.049ENSCVAG00000019742rpl139565.842Cyprinodon_variegatus
FBgn0011272RpL139364.356ENSDARG00000099380rpl139766.667Danio_rerio
FBgn0011272RpL139364.851ENSDNOG00000034247RPL139564.851Dasypus_novemcinctus
FBgn0011272RpL137664.458ENSDORG00000028330Rpl139764.458Dipodomys_ordii
FBgn0011272RpL139455.072ENSETEG00000015057-9755.072Echinops_telfairi
FBgn0011272RpL138146.893ENSETEG00000004518-9346.893Echinops_telfairi
FBgn0011272RpL139561.792ENSEBUG00000000730rpl139861.792Eptatretus_burgeri
FBgn0011272RpL136262.222ENSEEUG00000011190-9662.222Erinaceus_europaeus
FBgn0011272RpL139340.099ENSEEUG00000006113-9440.099Erinaceus_europaeus
FBgn0011272RpL139262.871ENSELUG00000014509rpl139562.871Esox_lucius
FBgn0011272RpL138242.077ENSFCAG00000029961-9042.077Felis_catus
FBgn0011272RpL139363.861ENSFCAG00000003338RPL139563.861Felis_catus
FBgn0011272RpL139363.592ENSFALG00000003173RPL139563.592Ficedula_albicollis
FBgn0011272RpL139364.356ENSFDAG00000011310RPL139564.356Fukomys_damarensis
FBgn0011272RpL139365.347ENSFHEG00000006122rpl139565.347Fundulus_heteroclitus
FBgn0011272RpL139361.765ENSGMOG00000002752rpl139561.765Gadus_morhua
FBgn0011272RpL139362.621ENSGALG00000006179RPL139562.621Gallus_gallus
FBgn0011272RpL139358.911ENSGAFG00000017260rpl139558.911Gambusia_affinis
FBgn0011272RpL139362.376ENSGACG00000015752rpl139562.376Gasterosteus_aculeatus
FBgn0011272RpL139363.366ENSGAGG00000003371RPL139563.366Gopherus_agassizii
FBgn0011272RpL139254.500ENSGGOG00000026762-9454.500Gorilla_gorilla
FBgn0011272RpL137864.497ENSGGOG00000025427RPL139564.497Gorilla_gorilla
FBgn0011272RpL139362.871ENSHBUG00000013579rpl139562.871Haplochromis_burtoni
FBgn0011272RpL139364.356ENSHGLG00000010880RPL139564.356Heterocephalus_glaber_female
FBgn0011272RpL139364.356ENSHGLG00100018449RPL139564.356Heterocephalus_glaber_male
FBgn0011272RpL139363.366ENSHCOG00000002997rpl139563.366Hippocampus_comes
FBgn0011272RpL139361.650ENSIPUG00000009775rpl139561.650Ictalurus_punctatus
FBgn0011272RpL139362.871ENSSTOG00000011963RPL139562.871Ictidomys_tridecemlineatus
FBgn0011272RpL139364.356ENSJJAG00000014012Rpl139564.356Jaculus_jaculus
FBgn0011272RpL139256.000ENSJJAG00000000236-9456.000Jaculus_jaculus
FBgn0011272RpL139364.356ENSKMAG00000006540rpl139564.356Kryptolebias_marmoratus
FBgn0011272RpL139362.871ENSLBEG00000026455rpl139562.871Labrus_bergylta
FBgn0011272RpL135850.394ENSLACG00000001306-9550.394Latimeria_chalumnae
FBgn0011272RpL135656.349ENSLACG00000014843-9056.349Latimeria_chalumnae
FBgn0011272RpL137648.810ENSLACG00000000752-8648.810Latimeria_chalumnae
FBgn0011272RpL139361.650ENSLACG00000013768rpl139561.650Latimeria_chalumnae
FBgn0011272RpL135357.983ENSLACG00000005311-9657.983Latimeria_chalumnae
FBgn0011272RpL137647.305ENSLACG00000004644-9347.305Latimeria_chalumnae
FBgn0011272RpL139347.664ENSLACG00000002299-10047.664Latimeria_chalumnae
FBgn0011272RpL139363.861ENSLOCG00000004063rpl139563.861Lepisosteus_oculatus
FBgn0011272RpL139364.356ENSLAFG00000004054RPL139564.356Loxodonta_africana
FBgn0011272RpL139363.861ENSMFAG00000027717-9563.861Macaca_fascicularis
FBgn0011272RpL139249.000ENSMFAG00000046109-9149.000Macaca_fascicularis
FBgn0011272RpL139363.861ENSMMUG00000017928RPL139563.861Macaca_mulatta
FBgn0011272RpL139248.500ENSMMUG00000038060-9148.500Macaca_mulatta
FBgn0011272RpL137147.468ENSMNEG00000033097-7947.468Macaca_nemestrina
FBgn0011272RpL139250.000ENSMNEG00000030483-9150.000Macaca_nemestrina
FBgn0011272RpL139349.505ENSMLEG00000036728-9449.505Mandrillus_leucophaeus
FBgn0011272RpL139250.000ENSMLEG00000033776-9150.000Mandrillus_leucophaeus
FBgn0011272RpL139364.356ENSMAMG00000021552rpl139564.356Mastacembelus_armatus
FBgn0011272RpL139362.871ENSMZEG00005014343rpl139562.871Maylandia_zebra
FBgn0011272RpL137962.147ENSMGAG00000008027RPL139762.147Meleagris_gallopavo
FBgn0011272RpL137166.234ENSMAUG00000020543-9766.234Mesocricetus_auratus
FBgn0011272RpL139360.891ENSMAUG00000016802-9560.891Mesocricetus_auratus
FBgn0011272RpL139363.861ENSMICG00000043954-9563.861Microcebus_murinus
FBgn0011272RpL136960.667ENSMICG00000027620-8760.667Microcebus_murinus
FBgn0011272RpL139354.950ENSMOCG00000021875-9554.950Microtus_ochrogaster
FBgn0011272RpL139252.500ENSMOCG00000011602-9352.500Microtus_ochrogaster
FBgn0011272RpL139358.049ENSMOCG00000016985-9558.049Microtus_ochrogaster
FBgn0011272RpL139363.861ENSMOCG00000002216-9563.861Microtus_ochrogaster
FBgn0011272RpL139364.356ENSMOCG00000009058-9564.356Microtus_ochrogaster
FBgn0011272RpL139363.861ENSMMOG00000016577rpl139563.861Mola_mola
FBgn0011272RpL139364.390ENSMODG00000003663RPL139564.390Monodelphis_domestica
FBgn0011272RpL139364.356ENSMALG00000020934rpl139564.356Monopterus_albus
FBgn0011272RpL139363.861MGP_CAROLIEiJ_G0031676Rpl139563.861Mus_caroli
FBgn0011272RpL139363.861ENSMUSG00000000740Rpl139563.861Mus_musculus
FBgn0011272RpL139363.861MGP_PahariEiJ_G0023274Rpl139563.861Mus_pahari
FBgn0011272RpL135154.237MGP_PahariEiJ_G0022842-9154.237Mus_pahari
FBgn0011272RpL139364.356MGP_SPRETEiJ_G0032794Rpl139564.356Mus_spretus
FBgn0011272RpL138961.026MGP_SPRETEiJ_G0031839-7661.026Mus_spretus
FBgn0011272RpL139144.949ENSMPUG00000001481-9044.949Mustela_putorius_furo
FBgn0011272RpL139364.356ENSMLUG00000010950RPL138964.356Myotis_lucifugus
FBgn0011272RpL137645.783ENSNGAG00000012072-9145.783Nannospalax_galili
FBgn0011272RpL139363.861ENSNGAG00000018467Rpl139563.861Nannospalax_galili
FBgn0011272RpL138349.724ENSNGAG00000014655-9549.724Nannospalax_galili
FBgn0011272RpL139362.871ENSNBRG00000011031rpl139562.871Neolamprologus_brichardi
FBgn0011272RpL139363.861ENSNLEG00000015774RPL139563.861Nomascus_leucogenys
FBgn0011272RpL139251.232ENSNLEG00000028759-9452.239Nomascus_leucogenys
FBgn0011272RpL139363.366ENSODEG00000019458-9563.366Octodon_degus
FBgn0011272RpL139361.881ENSODEG00000020384-9561.881Octodon_degus
FBgn0011272RpL139362.376ENSODEG00000019297-9562.376Octodon_degus
FBgn0011272RpL139363.366ENSODEG00000004235-9563.366Octodon_degus
FBgn0011272RpL139358.911ENSODEG00000019351-9558.911Octodon_degus
FBgn0011272RpL139360.891ENSODEG00000019915-9560.891Octodon_degus
FBgn0011272RpL139362.871ENSONIG00000005934rpl139562.871Oreochromis_niloticus
FBgn0011272RpL139364.563ENSOANG00000006729RPL139564.563Ornithorhynchus_anatinus
FBgn0011272RpL139359.024ENSOCUG00000022399-9559.024Oryctolagus_cuniculus
FBgn0011272RpL139360.976ENSOCUG00000007536-9560.976Oryctolagus_cuniculus
FBgn0011272RpL139360.000ENSOCUG00000024415-9560.000Oryctolagus_cuniculus
FBgn0011272RpL139364.851ENSORLG00000007654rpl139564.851Oryzias_latipes
FBgn0011272RpL139364.851ENSORLG00020009960rpl139564.851Oryzias_latipes_hni
FBgn0011272RpL139364.851ENSORLG00015008108rpl139564.851Oryzias_latipes_hsok
FBgn0011272RpL139365.347ENSOMEG00000001728rpl139565.347Oryzias_melastigma
FBgn0011272RpL139364.356ENSOGAG00000026444RPL139564.356Otolemur_garnettii
FBgn0011272RpL139359.901ENSOARG00000003957-6759.901Ovis_aries
FBgn0011272RpL137864.497ENSPPAG00000029415-9664.497Pan_paniscus
FBgn0011272RpL139254.589ENSPPAG00000041631-9454.589Pan_paniscus
FBgn0011272RpL139358.911ENSPPAG00000042590-9158.911Pan_paniscus
FBgn0011272RpL139363.861ENSPPRG00000003949RPL139563.861Panthera_pardus
FBgn0011272RpL137145.455ENSPPRG00000006057-7545.455Panthera_pardus
FBgn0011272RpL137145.455ENSPTIG00000014719-7545.455Panthera_tigris_altaica
FBgn0011272RpL135861.111ENSPTIG00000010985RPL138261.111Panthera_tigris_altaica
FBgn0011272RpL139363.861ENSPTRG00000008480RPL139563.861Pan_troglodytes
FBgn0011272RpL139254.106ENSPTRG00000047911-9454.106Pan_troglodytes
FBgn0011272RpL139358.911ENSPTRG00000041770-9558.911Pan_troglodytes
FBgn0011272RpL139364.356ENSPANG00000031667RPL139564.356Papio_anubis
FBgn0011272RpL139365.347ENSPKIG00000001789rpl139565.347Paramormyrops_kingsleyae
FBgn0011272RpL139363.861ENSPSIG00000015634RPL139563.861Pelodiscus_sinensis
FBgn0011272RpL139363.366ENSPMGG00000006067rpl139563.366Periophthalmus_magnuspinnatus
FBgn0011272RpL139363.861ENSPEMG00000010342Rpl139563.861Peromyscus_maniculatus_bairdii
FBgn0011272RpL139364.878ENSPFOG00000013435rpl139564.878Poecilia_formosa
FBgn0011272RpL139364.878ENSPLAG00000004085rpl139564.878Poecilia_latipinna
FBgn0011272RpL139364.878ENSPMEG00000015599rpl139564.878Poecilia_mexicana
FBgn0011272RpL139364.878ENSPREG00000023190rpl139564.878Poecilia_reticulata
FBgn0011272RpL139363.861ENSPCAG00000015461RPL139563.861Procavia_capensis
FBgn0011272RpL139364.356ENSPCOG00000024647RPL139564.356Propithecus_coquereli
FBgn0011272RpL139361.386ENSPVAG00000015130RPL139561.386Pteropus_vampyrus
FBgn0011272RpL139362.871ENSPNYG00000013189rpl139562.871Pundamilia_nyererei
FBgn0011272RpL139364.078ENSPNAG00000002916rpl139564.390Pygocentrus_nattereri
FBgn0011272RpL139362.871ENSRNOG00000061438LOC1003604919562.871Rattus_norvegicus
FBgn0011272RpL139363.366ENSRNOG00000055911LOC1003612599563.366Rattus_norvegicus
FBgn0011272RpL139362.376ENSRNOG00000059545AC114446.19662.376Rattus_norvegicus
FBgn0011272RpL139360.396ENSRNOG00000029227AABR07054469.19560.396Rattus_norvegicus
FBgn0011272RpL139363.861ENSRNOG00000015335Rpl139563.861Rattus_norvegicus
FBgn0011272RpL139364.356ENSRBIG00000031937RPL139564.356Rhinopithecus_bieti
FBgn0011272RpL139651.196ENSRBIG00000010434-8851.196Rhinopithecus_bieti
FBgn0011272RpL139364.356ENSRROG00000036999-9564.356Rhinopithecus_roxellana
FBgn0011272RpL139651.196ENSRROG00000025626-8851.196Rhinopithecus_roxellana
FBgn0011272RpL138944.388YDL082WRPL13A9745.673Saccharomyces_cerevisiae
FBgn0011272RpL138944.388YMR142CRPL13B9745.673Saccharomyces_cerevisiae
FBgn0011272RpL139350.244ENSSBOG00000019618-9450.244Saimiri_boliviensis_boliviensis
FBgn0011272RpL139364.356ENSSBOG00000028589-9564.356Saimiri_boliviensis_boliviensis
FBgn0011272RpL137340.000ENSSHAG00000010433-9940.000Sarcophilus_harrisii
FBgn0011272RpL139364.851ENSSFOG00015019594rpl139564.851Scleropages_formosus
FBgn0011272RpL139363.366ENSSMAG00000021443rpl139563.366Scophthalmus_maximus
FBgn0011272RpL139363.366ENSSDUG00000001262rpl139563.366Seriola_dumerili
FBgn0011272RpL139363.366ENSSLDG00000021182rpl139563.366Seriola_lalandi_dorsalis
FBgn0011272RpL139451.376ENSSLDG00000007067-9851.376Seriola_lalandi_dorsalis
FBgn0011272RpL137165.584ENSSPUG00000006904RPL138665.584Sphenodon_punctatus
FBgn0011272RpL139363.366ENSSPAG00000020434rpl139563.366Stegastes_partitus
FBgn0011272RpL139364.563ENSSSCG00000024974RPL139564.563Sus_scrofa
FBgn0011272RpL138647.368ENSSSCG00000033294-8947.368Sus_scrofa
FBgn0011272RpL138948.731ENSSSCG00000007813-9448.731Sus_scrofa
FBgn0011272RpL139349.268ENSSSCG00000036198-9449.268Sus_scrofa
FBgn0011272RpL139350.000ENSSSCG00000003723-9550.000Sus_scrofa
FBgn0011272RpL139342.105ENSSSCG00000029020-9242.105Sus_scrofa
FBgn0011272RpL139363.107ENSTGUG00000007874RPL139563.107Taeniopygia_guttata
FBgn0011272RpL139364.078ENSTRUG00000021170rpl139564.078Takifugu_rubripes
FBgn0011272RpL139364.078ENSTNIG00000009349rpl139564.078Tetraodon_nigroviridis
FBgn0011272RpL139364.851ENSTTRG00000004374RPL139564.851Tursiops_truncatus
FBgn0011272RpL139363.861ENSUAMG00000020363RPL139563.861Ursus_americanus
FBgn0011272RpL135358.621ENSVPAG00000000569-9358.621Vicugna_pacos
FBgn0011272RpL138740.887ENSVVUG00000005779-8940.887Vulpes_vulpes
FBgn0011272RpL139359.901ENSVVUG00000003839-9559.901Vulpes_vulpes
FBgn0011272RpL139363.107ENSXETG00000019835rpl139563.107Xenopus_tropicalis
FBgn0011272RpL139364.878ENSXCOG00000011315rpl139564.878Xiphophorus_couchianus
FBgn0011272RpL139364.878ENSXMAG00000003221rpl139564.878Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0002181cytoplasmic translation16889426.ICProcess
GO:0002181cytoplasmic translation17927810.TASProcess
GO:0003735structural constituent of ribosome16889426.HDAFunction
GO:0003735structural constituent of ribosome-IEAFunction
GO:0003735structural constituent of ribosome17927810.TASFunction
GO:0006412translation-IEAProcess
GO:0022625cytosolic large ribosomal subunit21873635.IBAComponent
GO:0022625cytosolic large ribosomal subunit17927810.TASComponent
GO:0022626cytosolic ribosome16889426.HDAComponent

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