EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: FBgn0011305 (Gene tree)
Gene ID: 34370
Gene Symbol: Rsf1
Alias: -
Full Name: Repressor splicing factor 1
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 1760 bases
Position: chr2L:10261795-10263554
Accession: FBgn0011305
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0079668	RRM_5	PF13893.6	8.2e-07	1	1
FBpp0305603	RRM_5	PF13893.6	8.2e-07	1	1
FBpp0079668	RRM_1	PF00076.22	6.9e-16	1	1
FBpp0305603	RRM_1	PF00076.22	6.9e-16	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0080079	-	914	-	FBpp0079668	200 (aa)	-	Q24491
FBtr0333411	-	1760	-	FBpp0305603	200 (aa)	-	Q8SYR3

Gene Model

Click here to download FBgn0011305's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0011305's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	25414008.	IMP	Process
GO:0001178	regulation of transcriptional start site selection at RNA polymerase II promoter	25414008.	IMP	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003729	mRNA binding	25414008.	IDA	Function
GO:0003729	mRNA binding	10908586.	ISS	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	12134081.	IDA	Component
GO:0010468	regulation of gene expression	25414008.	IMP	Process
GO:0016607	nuclear speck	21873635.	IBA	Component
GO:0031440	regulation of mRNA 3'-end processing	25414008.	IMP	Process
GO:0045292	mRNA cis splicing, via spliceosome	21873635.	IBA	Process