EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0011638 (Gene tree)
Gene ID: 35305
Gene Symbol: La
Alias: -
Full Name: La autoantigen-like
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 1620 bases
Position: chr2L:20348393-20350012
Accession: FBgn0011638
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0080906	RRM_3	PF08777.11	2e-14	1	1
FBpp0080906	La	PF05383.17	4.1e-23	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0081374	-	1549	-	FBpp0080906	390 (aa)	-	P40796

Gene Model

Click here to download FBgn0011638's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0011638's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0011638	La	92	34.555	ENSG00000138385	SSB	98	39.837	Homo_sapiens
FBgn0011638	La	81	36.527	ENSAPOG00000003448	ssb	88	36.158	Acanthochromis_polyacanthus
FBgn0011638	La	73	36.634	ENSAMEG00000010507	SSB	63	36.397	Ailuropoda_melanoleuca
FBgn0011638	La	81	36.280	ENSACIG00000001738	ssb	81	47.321	Amphilophus_citrinellus
FBgn0011638	La	78	37.578	ENSAOCG00000020398	ssb	88	36.441	Amphiprion_ocellaris
FBgn0011638	La	78	37.578	ENSAPEG00000020395	ssb	88	36.441	Amphiprion_percula
FBgn0011638	La	71	37.288	ENSATEG00000016884	ssb	84	35.613	Anabas_testudineus
FBgn0011638	La	79	34.337	ENSAPLG00000006109	SSB	75	35.366	Anas_platyrhynchos
FBgn0011638	La	85	32.961	ENSACAG00000017008	SSB	83	33.903	Anolis_carolinensis
FBgn0011638	La	81	35.562	ENSACLG00000010798	ssb	90	34.659	Astatotilapia_calliptera
FBgn0011638	La	67	35.662	ENSAMXG00000012606	ssb	88	34.239	Astyanax_mexicanus
FBgn0011638	La	92	33.780	ENSBTAG00000008716	SSB	84	34.384	Bos_taurus
FBgn0011638	La	79	32.817	WBGene00016653	C44E4.4	87	32.584	Caenorhabditis_elegans
FBgn0011638	La	86	34.637	ENSCJAG00000045073	SSB	75	51.961	Callithrix_jacchus
FBgn0011638	La	92	33.421	ENSCAFG00000012418	SSB	83	33.524	Canis_familiaris
FBgn0011638	La	92	33.421	ENSCAFG00020002900	SSB	83	33.524	Canis_lupus_dingo
FBgn0011638	La	92	32.796	ENSCHIG00000022196	-	86	33.621	Capra_hircus
FBgn0011638	La	92	33.780	ENSCHIG00000022624	-	84	34.384	Capra_hircus
FBgn0011638	La	92	35.813	ENSTSYG00000000097	SSB	83	36.095	Carlito_syrichta
FBgn0011638	La	92	35.040	ENSCPOG00000003338	SSB	85	34.706	Cavia_porcellus
FBgn0011638	La	92	34.293	ENSCCAG00000035147	SSB	75	51.961	Cebus_capucinus
FBgn0011638	La	92	33.947	ENSCLAG00000015617	-	84	34.097	Chinchilla_lanigera
FBgn0011638	La	94	34.271	ENSCSAG00000015200	SSB	79	33.594	Chlorocebus_sabaeus
FBgn0011638	La	92	32.181	ENSCSAG00000018390	-	85	32.277	Chlorocebus_sabaeus
FBgn0011638	La	92	33.065	ENSCHOG00000007763	SSB	84	33.621	Choloepus_hoffmanni
FBgn0011638	La	54	44.811	ENSCPBG00000006519	SSB	81	35.277	Chrysemys_picta_bellii
FBgn0011638	La	92	32.603	ENSCANG00000033240	-	83	31.965	Colobus_angolensis_palliatus
FBgn0011638	La	92	34.555	ENSCANG00000027695	SSB	84	34.758	Colobus_angolensis_palliatus
FBgn0011638	La	67	35.294	ENSCGRG00001024831	Ssb	85	32.203	Cricetulus_griseus_chok1gshd
FBgn0011638	La	67	35.294	ENSCGRG00000005387	Ssb	85	32.203	Cricetulus_griseus_crigri
FBgn0011638	La	80	36.061	ENSCSEG00000011599	ssb	85	35.028	Cynoglossus_semilaevis
FBgn0011638	La	78	36.223	ENSCVAG00000021558	ssb	85	34.181	Cyprinodon_variegatus
FBgn0011638	La	66	36.194	ENSDARG00000029252	ssb	88	33.787	Danio_rerio
FBgn0011638	La	92	34.037	ENSDNOG00000013450	SSB	84	34.195	Dasypus_novemcinctus
FBgn0011638	La	67	39.114	ENSDORG00000005543	Ssb	64	37.687	Dipodomys_ordii
FBgn0011638	La	72	35.764	ENSEBUG00000001237	ssb	91	33.427	Eptatretus_burgeri
FBgn0011638	La	92	34.737	ENSEASG00005022835	SSB	84	34.384	Equus_asinus_asinus
FBgn0011638	La	92	34.737	ENSECAG00000018495	SSB	86	34.384	Equus_caballus
FBgn0011638	La	52	45.098	ENSEEUG00000008077	SSB	54	44.503	Erinaceus_europaeus
FBgn0011638	La	82	33.832	ENSELUG00000020929	ssb	84	32.861	Esox_lucius
FBgn0011638	La	92	33.947	ENSFCAG00000011601	SSB	83	34.097	Felis_catus
FBgn0011638	La	66	36.861	ENSFALG00000000930	SSB	81	34.111	Ficedula_albicollis
FBgn0011638	La	86	34.831	ENSFDAG00000000598	SSB	84	34.384	Fukomys_damarensis
FBgn0011638	La	82	36.095	ENSGMOG00000002664	ssb	86	35.211	Gadus_morhua
FBgn0011638	La	87	34.626	ENSGALG00000009677	SSB	82	34.648	Gallus_gallus
FBgn0011638	La	80	34.421	ENSGAFG00000002749	ssb	84	34.746	Gambusia_affinis
FBgn0011638	La	81	34.234	ENSGACG00000005107	ssb	84	33.898	Gasterosteus_aculeatus
FBgn0011638	La	54	43.396	ENSGAGG00000007807	SSB	81	34.402	Gopherus_agassizii
FBgn0011638	La	83	32.239	ENSGGOG00000024891	-	79	31.045	Gorilla_gorilla
FBgn0011638	La	78	37.421	ENSHBUG00000006584	ssb	86	34.078	Haplochromis_burtoni
FBgn0011638	La	86	33.626	ENSHGLG00000005832	-	86	32.845	Heterocephalus_glaber_female
FBgn0011638	La	86	34.160	ENSHGLG00000017580	-	84	33.708	Heterocephalus_glaber_female
FBgn0011638	La	86	34.160	ENSHGLG00100003084	-	84	33.708	Heterocephalus_glaber_male
FBgn0011638	La	92	32.615	ENSHGLG00100008767	-	84	32.558	Heterocephalus_glaber_male
FBgn0011638	La	72	35.354	ENSHCOG00000019011	ssb	85	34.682	Hippocampus_comes
FBgn0011638	La	72	36.700	ENSIPUG00000003681	SSB	87	34.254	Ictalurus_punctatus
FBgn0011638	La	89	34.595	ENSSTOG00000008416	SSB	81	34.808	Ictidomys_tridecemlineatus
FBgn0011638	La	58	30.435	ENSJJAG00000016250	-	66	30.435	Jaculus_jaculus
FBgn0011638	La	78	34.783	ENSJJAG00000023158	-	73	33.968	Jaculus_jaculus
FBgn0011638	La	79	36.000	ENSKMAG00000017317	ssb	86	34.637	Kryptolebias_marmoratus
FBgn0011638	La	78	36.728	ENSLBEG00000017345	ssb	86	35.311	Labrus_bergylta
FBgn0011638	La	67	37.868	ENSLACG00000014056	SSB	83	34.561	Latimeria_chalumnae
FBgn0011638	La	67	37.269	ENSLOCG00000007933	ssb	83	34.078	Lepisosteus_oculatus
FBgn0011638	La	66	31.439	ENSLAFG00000026721	-	86	31.439	Loxodonta_africana
FBgn0011638	La	73	35.974	ENSLAFG00000000867	-	65	35.135	Loxodonta_africana
FBgn0011638	La	92	31.215	ENSMFAG00000041478	-	95	31.361	Macaca_fascicularis
FBgn0011638	La	92	34.555	ENSMFAG00000039066	SSB	74	51.961	Macaca_fascicularis
FBgn0011638	La	92	34.555	ENSMMUG00000023051	SSB	74	51.961	Macaca_mulatta
FBgn0011638	La	92	32.320	ENSMMUG00000011724	-	82	32.544	Macaca_mulatta
FBgn0011638	La	86	36.202	ENSMNEG00000028321	SSB	74	51.961	Macaca_nemestrina
FBgn0011638	La	92	31.215	ENSMNEG00000034698	-	95	31.065	Macaca_nemestrina
FBgn0011638	La	92	34.555	ENSMLEG00000035717	SSB	77	51.961	Mandrillus_leucophaeus
FBgn0011638	La	79	36.000	ENSMAMG00000004800	ssb	86	35.196	Mastacembelus_armatus
FBgn0011638	La	81	35.562	ENSMZEG00005005749	ssb	90	34.659	Maylandia_zebra
FBgn0011638	La	84	34.770	ENSMGAG00000010328	SSB	88	45.213	Meleagris_gallopavo
FBgn0011638	La	86	34.831	ENSMICG00000028252	-	83	34.384	Microcebus_murinus
FBgn0011638	La	92	32.873	ENSMICG00000033304	-	86	33.136	Microcebus_murinus
FBgn0011638	La	84	34.311	ENSMODG00000008227	-	85	33.243	Monodelphis_domestica
FBgn0011638	La	81	37.771	ENSMALG00000008045	ssb	81	36.842	Monopterus_albus
FBgn0011638	La	68	36.727	MGP_CAROLIEiJ_G0023629	-	98	41.414	Mus_caroli
FBgn0011638	La	68	36.364	ENSMUSG00000068882	Ssb	98	41.414	Mus_musculus
FBgn0011638	La	67	36.531	MGP_PahariEiJ_G0025081	-	91	43.678	Mus_pahari
FBgn0011638	La	68	36.364	MGP_SPRETEiJ_G0024551	Ssb	98	41.414	Mus_spretus
FBgn0011638	La	92	34.474	ENSMPUG00000000785	SSB	84	34.097	Mustela_putorius_furo
FBgn0011638	La	67	36.996	ENSMLUG00000016316	SSB	63	36.397	Myotis_lucifugus
FBgn0011638	La	81	35.562	ENSNBRG00000012661	ssb	90	34.659	Neolamprologus_brichardi
FBgn0011638	La	92	34.555	ENSNLEG00000004958	SSB	84	46.032	Nomascus_leucogenys
FBgn0011638	La	50	44.615	ENSMEUG00000001650	-	71	43.956	Notamacropus_eugenii
FBgn0011638	La	51	42.929	ENSODEG00000010185	-	91	44.253	Octodon_degus
FBgn0011638	La	83	33.333	ENSODEG00000004202	-	91	32.845	Octodon_degus
FBgn0011638	La	78	37.107	ENSONIG00000008776	ssb	86	34.870	Oreochromis_niloticus
FBgn0011638	La	78	34.769	ENSOANG00000008543	SSB	81	34.897	Ornithorhynchus_anatinus
FBgn0011638	La	89	34.332	ENSOCUG00000010396	SSB	83	33.611	Oryctolagus_cuniculus
FBgn0011638	La	77	35.331	ENSORLG00000017208	ssb	85	33.333	Oryzias_latipes
FBgn0011638	La	77	35.948	ENSORLG00020022574	ssb	84	33.613	Oryzias_latipes_hni
FBgn0011638	La	77	35.331	ENSORLG00015016592	ssb	85	33.613	Oryzias_latipes_hsok
FBgn0011638	La	78	36.957	ENSOMEG00000003193	ssb	84	35.493	Oryzias_melastigma
FBgn0011638	La	73	36.242	ENSOGAG00000029768	SSB	63	36.397	Otolemur_garnettii
FBgn0011638	La	92	33.245	ENSOARG00000002906	SSB	84	34.097	Ovis_aries
FBgn0011638	La	92	34.555	ENSPPAG00000042673	SSB	84	46.032	Pan_paniscus
FBgn0011638	La	83	32.831	ENSPPAG00000032427	-	88	46.087	Pan_paniscus
FBgn0011638	La	92	33.947	ENSPPRG00000006599	SSB	83	34.097	Panthera_pardus
FBgn0011638	La	92	33.947	ENSPTIG00000011021	SSB	81	34.097	Panthera_tigris_altaica
FBgn0011638	La	83	32.219	ENSPTRG00000042880	-	79	32.012	Pan_troglodytes
FBgn0011638	La	92	34.555	ENSPTRG00000012620	SSB	84	46.032	Pan_troglodytes
FBgn0011638	La	92	34.555	ENSPANG00000007440	SSB	74	51.961	Papio_anubis
FBgn0011638	La	79	33.438	ENSPKIG00000019325	ssb	90	32.958	Paramormyrops_kingsleyae
FBgn0011638	La	75	35.161	ENSPSIG00000002265	SSB	75	34.503	Pelodiscus_sinensis
FBgn0011638	La	68	34.982	ENSPMGG00000020075	ssb	80	33.123	Periophthalmus_magnuspinnatus
FBgn0011638	La	67	36.162	ENSPMAG00000002982	ssb	80	33.803	Petromyzon_marinus
FBgn0011638	La	84	34.770	ENSPCIG00000028591	-	88	33.067	Phascolarctos_cinereus
FBgn0011638	La	80	34.718	ENSPFOG00000009650	ssb	85	35.028	Poecilia_formosa
FBgn0011638	La	80	34.718	ENSPLAG00000020498	ssb	85	35.028	Poecilia_latipinna
FBgn0011638	La	80	34.718	ENSPMEG00000001051	ssb	85	35.028	Poecilia_mexicana
FBgn0011638	La	83	33.524	ENSPREG00000003708	ssb	88	34.463	Poecilia_reticulata
FBgn0011638	La	92	34.555	ENSPPYG00000012919	SSB	84	34.758	Pongo_abelii
FBgn0011638	La	64	38.550	ENSPCAG00000010276	SSB	86	34.036	Procavia_capensis
FBgn0011638	La	92	34.133	ENSPCOG00000015741	-	91	44.531	Propithecus_coquereli
FBgn0011638	La	81	35.608	ENSPVAG00000006615	SSB	91	34.545	Pteropus_vampyrus
FBgn0011638	La	81	35.562	ENSPNYG00000006444	ssb	90	34.659	Pundamilia_nyererei
FBgn0011638	La	66	35.821	ENSPNAG00000011708	ssb	83	33.714	Pygocentrus_nattereri
FBgn0011638	La	68	36.559	ENSRNOG00000007998	Ssb	65	36.201	Rattus_norvegicus
FBgn0011638	La	67	35.424	ENSRNOG00000011606	AABR07061825.1	86	32.113	Rattus_norvegicus
FBgn0011638	La	83	31.118	ENSRBIG00000041232	-	89	40.136	Rhinopithecus_bieti
FBgn0011638	La	77	32.390	ENSRBIG00000041608	-	81	31.190	Rhinopithecus_bieti
FBgn0011638	La	92	31.507	ENSRBIG00000041972	SSB	77	51.961	Rhinopithecus_bieti
FBgn0011638	La	86	31.686	ENSRROG00000031684	-	90	41.509	Rhinopithecus_roxellana
FBgn0011638	La	81	32.544	ENSRROG00000034102	-	82	30.925	Rhinopithecus_roxellana
FBgn0011638	La	92	34.555	ENSRROG00000040346	SSB	74	51.961	Rhinopithecus_roxellana
FBgn0011638	La	92	34.293	ENSSBOG00000027204	SSB	75	51.961	Saimiri_boliviensis_boliviensis
FBgn0011638	La	84	34.483	ENSSHAG00000018062	SSB	86	33.243	Sarcophilus_harrisii
FBgn0011638	La	78	32.923	ENSSFOG00015000550	ssb	83	33.616	Scleropages_formosus
FBgn0011638	La	78	37.621	ENSSMAG00000013885	ssb	91	35.311	Scophthalmus_maximus
FBgn0011638	La	78	36.137	ENSSDUG00000020117	ssb	85	35.028	Seriola_dumerili
FBgn0011638	La	78	37.299	ENSSLDG00000002525	ssb	84	35.965	Seriola_lalandi_dorsalis
FBgn0011638	La	66	35.821	ENSSPUG00000012112	SSB	81	33.431	Sphenodon_punctatus
FBgn0011638	La	78	36.957	ENSSPAG00000005696	ssb	88	36.158	Stegastes_partitus
FBgn0011638	La	73	36.424	ENSSSCG00000015938	SSB	83	32.764	Sus_scrofa
FBgn0011638	La	79	34.441	ENSTGUG00000007942	SSB	81	34.111	Taeniopygia_guttata
FBgn0011638	La	78	37.383	ENSTRUG00000017839	ssb	85	35.876	Takifugu_rubripes
FBgn0011638	La	81	37.048	ENSTNIG00000000915	ssb	89	37.048	Tetraodon_nigroviridis
FBgn0011638	La	92	35.092	ENSTTRG00000002152	SSB	83	34.670	Tursiops_truncatus
FBgn0011638	La	92	33.684	ENSUAMG00000027833	SSB	89	33.811	Ursus_americanus
FBgn0011638	La	92	33.684	ENSUMAG00000013907	SSB	83	33.811	Ursus_maritimus
FBgn0011638	La	86	34.930	ENSVPAG00000007183	SSB	85	33.908	Vicugna_pacos
FBgn0011638	La	86	33.989	ENSVVUG00000016573	SSB	65	33.524	Vulpes_vulpes
FBgn0011638	La	65	36.029	ENSXETG00000025402	ssb	77	32.647	Xenopus_tropicalis
FBgn0011638	La	80	35.802	ENSXCOG00000019109	ssb	75	50.000	Xiphophorus_couchianus
FBgn0011638	La	80	34.557	ENSXMAG00000004888	ssb	84	34.746	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000791	euchromatin	27514026.	IDA	Component
GO:0003729	mRNA binding	10908586.	ISS	Function
GO:0003729	mRNA binding	11095759.	NAS	Function
GO:0005634	nucleus	8035818.	IDA	Component
GO:0006396	RNA processing	-	IEA	Process
GO:0008098	5S rRNA primary transcript binding	8035818.	IDA	Function
GO:1990904	ribonucleoprotein complex	-	IEA	Component