EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0011787 (Gene tree)
Gene ID: 44326
Gene Symbol: mRpL12
Alias: -
Full Name: mitochondrial ribosomal protein L12
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 794 bases
Position: chr3L:8956791-8957584
Accession: FBgn0011787
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0076238	Ribosomal_L12	PF00542.19	2.2e-19	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0076511	-	738	-	FBpp0076238	182 (aa)	-	Q2XYH0

Gene Model

Click here to download FBgn0011787's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0011787's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0011787	mRpL12	73	38.686	ENSG00000262814	MRPL12	89	35.165	Homo_sapiens
FBgn0011787	mRpL12	100	41.753	ENSAPOG00000005018	mrpl12	100	41.753	Acanthochromis_polyacanthus
FBgn0011787	mRpL12	100	41.089	ENSACIG00000006182	mrpl12	100	41.026	Amphilophus_citrinellus
FBgn0011787	mRpL12	100	41.451	ENSAOCG00000003859	mrpl12	100	41.451	Amphiprion_ocellaris
FBgn0011787	mRpL12	100	41.451	ENSAPEG00000005897	mrpl12	100	41.451	Amphiprion_percula
FBgn0011787	mRpL12	90	44.512	ENSATEG00000023948	mrpl12	74	48.611	Anabas_testudineus
FBgn0011787	mRpL12	86	41.139	ENSACAG00000010743	MRPL12	80	41.667	Anolis_carolinensis
FBgn0011787	mRpL12	73	44.361	ENSANAG00000037237	-	69	44.361	Aotus_nancymaae
FBgn0011787	mRpL12	73	42.647	ENSANAG00000020985	-	69	41.912	Aotus_nancymaae
FBgn0011787	mRpL12	84	46.753	ENSACLG00000022963	mrpl12	79	46.753	Astatotilapia_calliptera
FBgn0011787	mRpL12	100	38.021	ENSAMXG00000032543	mrpl12	98	36.979	Astyanax_mexicanus
FBgn0011787	mRpL12	73	41.606	ENSBTAG00000000417	MRPL12	69	42.336	Bos_taurus
FBgn0011787	mRpL12	96	44.886	WBGene00012361	mrpl-12	97	41.989	Caenorhabditis_elegans
FBgn0011787	mRpL12	73	43.796	ENSCJAG00000001652	MRPL12	69	43.066	Callithrix_jacchus
FBgn0011787	mRpL12	73	38.686	ENSCHIG00000027210	MRPL12	69	42.336	Capra_hircus
FBgn0011787	mRpL12	73	41.606	ENSTSYG00000009746	MRPL12	69	42.336	Carlito_syrichta
FBgn0011787	mRpL12	73	41.304	ENSCPOG00000035389	MRPL12	69	41.304	Cavia_porcellus
FBgn0011787	mRpL12	73	43.796	ENSCCAG00000026887	MRPL12	69	43.066	Cebus_capucinus
FBgn0011787	mRpL12	73	43.066	ENSCATG00000045041	MRPL12	89	37.363	Cercocebus_atys
FBgn0011787	mRpL12	73	41.304	ENSCLAG00000012764	MRPL12	69	41.304	Chinchilla_lanigera
FBgn0011787	mRpL12	73	41.606	ENSCSAG00000002234	MRPL12	89	36.813	Chlorocebus_sabaeus
FBgn0011787	mRpL12	90	41.667	ENSCPBG00000011476	MRPL12	90	41.209	Chrysemys_picta_bellii
FBgn0011787	mRpL12	96	41.011	ENSCING00000012945	-	94	39.773	Ciona_intestinalis
FBgn0011787	mRpL12	73	40.146	ENSCANG00000029130	MRPL12	89	37.363	Colobus_angolensis_palliatus
FBgn0011787	mRpL12	73	39.286	ENSCGRG00001005393	Mrpl12	69	42.857	Cricetulus_griseus_chok1gshd
FBgn0011787	mRpL12	73	39.286	ENSCGRG00000015907	Mrpl12	70	42.857	Cricetulus_griseus_crigri
FBgn0011787	mRpL12	84	45.455	ENSCSEG00000009238	mrpl12	77	46.053	Cynoglossus_semilaevis
FBgn0011787	mRpL12	84	46.154	ENSCVAG00000008710	mrpl12	79	45.161	Cyprinodon_variegatus
FBgn0011787	mRpL12	99	43.814	ENSDARG00000038768	mrpl12	97	40.426	Danio_rerio
FBgn0011787	mRpL12	73	46.269	ENSDNOG00000042484	MRPL12	69	46.269	Dasypus_novemcinctus
FBgn0011787	mRpL12	73	39.855	ENSDORG00000008074	Mrpl12	69	39.855	Dipodomys_ordii
FBgn0011787	mRpL12	73	43.478	ENSEASG00005005780	MRPL12	69	43.478	Equus_asinus_asinus
FBgn0011787	mRpL12	73	43.478	ENSECAG00000009323	MRPL12	69	43.478	Equus_caballus
FBgn0011787	mRpL12	73	39.416	ENSEEUG00000015613	MRPL12	68	36.232	Erinaceus_europaeus
FBgn0011787	mRpL12	99	39.683	ENSELUG00000010073	mrpl12	97	38.172	Esox_lucius
FBgn0011787	mRpL12	73	42.029	ENSFDAG00000014977	MRPL12	79	42.754	Fukomys_damarensis
FBgn0011787	mRpL12	84	46.452	ENSFHEG00000014518	mrpl12	84	46.452	Fundulus_heteroclitus
FBgn0011787	mRpL12	96	46.067	ENSGMOG00000008213	mrpl12	76	46.053	Gadus_morhua
FBgn0011787	mRpL12	98	44.022	ENSGALG00000045753	MRPL12	75	49.645	Gallus_gallus
FBgn0011787	mRpL12	100	39.691	ENSGAFG00000003529	mrpl12	92	39.691	Gambusia_affinis
FBgn0011787	mRpL12	79	48.276	ENSGACG00000010541	mrpl12	76	46.358	Gasterosteus_aculeatus
FBgn0011787	mRpL12	77	44.138	ENSGAGG00000013180	MRPL12	73	43.448	Gopherus_agassizii
FBgn0011787	mRpL12	73	42.336	ENSGGOG00000009356	MRPL12	89	36.216	Gorilla_gorilla
FBgn0011787	mRpL12	100	39.691	ENSHBUG00000004986	mrpl12	99	40.206	Haplochromis_burtoni
FBgn0011787	mRpL12	73	41.304	ENSHGLG00000009470	MRPL12	69	42.754	Heterocephalus_glaber_female
FBgn0011787	mRpL12	73	42.963	ENSHGLG00100005034	MRPL12	70	43.704	Heterocephalus_glaber_male
FBgn0011787	mRpL12	100	43.523	ENSHCOG00000018775	mrpl12	100	41.451	Hippocampus_comes
FBgn0011787	mRpL12	100	40.933	ENSIPUG00000007392	Mrpl12	79	45.752	Ictalurus_punctatus
FBgn0011787	mRpL12	73	41.304	ENSSTOG00000031761	MRPL12	69	44.928	Ictidomys_tridecemlineatus
FBgn0011787	mRpL12	73	44.203	ENSJJAG00000018729	Mrpl12	69	45.652	Jaculus_jaculus
FBgn0011787	mRpL12	100	41.327	ENSKMAG00000012978	mrpl12	79	41.290	Kryptolebias_marmoratus
FBgn0011787	mRpL12	99	41.489	ENSLBEG00000024610	mrpl12	79	45.395	Labrus_bergylta
FBgn0011787	mRpL12	73	41.304	ENSLAFG00000004594	MRPL12	69	41.304	Loxodonta_africana
FBgn0011787	mRpL12	73	43.066	ENSMFAG00000042253	MRPL12	89	37.363	Macaca_fascicularis
FBgn0011787	mRpL12	73	43.066	ENSMNEG00000016503	MRPL12	89	37.363	Macaca_nemestrina
FBgn0011787	mRpL12	73	43.066	ENSMLEG00000041715	MRPL12	89	37.363	Mandrillus_leucophaeus
FBgn0011787	mRpL12	84	46.452	ENSMAMG00000020677	mrpl12	79	43.226	Mastacembelus_armatus
FBgn0011787	mRpL12	84	46.753	ENSMZEG00005011802	mrpl12	79	46.753	Maylandia_zebra
FBgn0011787	mRpL12	84	46.753	ENSMZEG00005021473	mrpl12	79	46.753	Maylandia_zebra
FBgn0011787	mRpL12	73	42.647	ENSMAUG00000002006	Mrpl12	69	42.647	Mesocricetus_auratus
FBgn0011787	mRpL12	98	36.813	ENSMICG00000047418	MRPL12	69	41.912	Microcebus_murinus
FBgn0011787	mRpL12	73	39.286	ENSMOCG00000019919	Mrpl12	70	42.857	Microtus_ochrogaster
FBgn0011787	mRpL12	82	48.344	ENSMMOG00000011266	mrpl12	78	48.667	Mola_mola
FBgn0011787	mRpL12	82	39.869	ENSMODG00000002902	MRPL12	78	42.484	Monodelphis_domestica
FBgn0011787	mRpL12	100	41.624	ENSMALG00000001391	mrpl12	78	44.667	Monopterus_albus
FBgn0011787	mRpL12	98	35.638	MGP_CAROLIEiJ_G0017522	Mrpl12	69	41.727	Mus_caroli
FBgn0011787	mRpL12	98	35.638	ENSMUSG00000039640	Mrpl12	69	41.727	Mus_musculus
FBgn0011787	mRpL12	73	40.288	MGP_PahariEiJ_G0018648	Mrpl12	69	41.727	Mus_pahari
FBgn0011787	mRpL12	98	35.638	MGP_SPRETEiJ_G0018366	Mrpl12	69	41.727	Mus_spretus
FBgn0011787	mRpL12	73	39.437	ENSNGAG00000010189	Mrpl12	70	38.732	Nannospalax_galili
FBgn0011787	mRpL12	97	42.458	ENSNBRG00000020817	mrpl12	79	46.104	Neolamprologus_brichardi
FBgn0011787	mRpL12	98	36.066	ENSNLEG00000035133	MRPL12	89	35.714	Nomascus_leucogenys
FBgn0011787	mRpL12	82	34.194	ENSMEUG00000010783	-	89	38.158	Notamacropus_eugenii
FBgn0011787	mRpL12	73	44.203	ENSODEG00000008765	MRPL12	69	41.304	Octodon_degus
FBgn0011787	mRpL12	71	34.507	ENSOANG00000021537	-	99	30.714	Ornithorhynchus_anatinus
FBgn0011787	mRpL12	82	48.684	ENSORLG00000007092	mrpl12	78	48.684	Oryzias_latipes
FBgn0011787	mRpL12	82	48.684	ENSORLG00020001351	mrpl12	78	48.684	Oryzias_latipes_hni
FBgn0011787	mRpL12	84	48.701	ENSORLG00015012065	mrpl12	79	48.701	Oryzias_latipes_hsok
FBgn0011787	mRpL12	85	45.860	ENSOMEG00000006871	mrpl12	78	48.701	Oryzias_melastigma
FBgn0011787	mRpL12	98	35.484	ENSOGAG00000005297	MRPL12	90	35.676	Otolemur_garnettii
FBgn0011787	mRpL12	70	39.394	ENSOARG00000018221	MRPL12	59	43.182	Ovis_aries
FBgn0011787	mRpL12	73	39.416	ENSPPAG00000042009	MRPL12	89	35.714	Pan_paniscus
FBgn0011787	mRpL12	98	36.957	ENSPPRG00000002570	MRPL12	89	38.043	Panthera_pardus
FBgn0011787	mRpL12	73	40.441	ENSPTIG00000019530	MRPL12	69	41.606	Panthera_tigris_altaica
FBgn0011787	mRpL12	73	39.416	ENSPTRG00000043438	MRPL12	89	35.714	Pan_troglodytes
FBgn0011787	mRpL12	73	43.066	ENSPANG00000019331	MRPL12	89	37.363	Papio_anubis
FBgn0011787	mRpL12	84	46.104	ENSPKIG00000012772	mrpl12	80	44.805	Paramormyrops_kingsleyae
FBgn0011787	mRpL12	77	43.750	ENSPSIG00000018211	MRPL12	72	42.466	Pelodiscus_sinensis
FBgn0011787	mRpL12	98	43.850	ENSPMGG00000008509	mrpl12	77	47.682	Periophthalmus_magnuspinnatus
FBgn0011787	mRpL12	73	39.568	ENSPEMG00000005848	Mrpl12	70	40.288	Peromyscus_maniculatus_bairdii
FBgn0011787	mRpL12	91	40.462	ENSPMAG00000001357	mrpl12	60	46.774	Petromyzon_marinus
FBgn0011787	mRpL12	82	40.000	ENSPCIG00000029585	MRPL12	78	40.000	Phascolarctos_cinereus
FBgn0011787	mRpL12	100	40.513	ENSPFOG00000024338	mrpl12	92	41.538	Poecilia_formosa
FBgn0011787	mRpL12	100	40.513	ENSPLAG00000002664	mrpl12	100	41.538	Poecilia_latipinna
FBgn0011787	mRpL12	100	40.513	ENSPMEG00000021484	mrpl12	100	41.538	Poecilia_mexicana
FBgn0011787	mRpL12	86	44.304	ENSPREG00000004225	mrpl12	82	44.079	Poecilia_reticulata
FBgn0011787	mRpL12	98	35.519	ENSPPYG00000008744	MRPL12	69	39.416	Pongo_abelii
FBgn0011787	mRpL12	98	35.519	ENSPCOG00000016998	MRPL12	89	35.714	Propithecus_coquereli
FBgn0011787	mRpL12	98	37.158	ENSPVAG00000011002	MRPL12	69	41.606	Pteropus_vampyrus
FBgn0011787	mRpL12	82	46.711	ENSPNYG00000008879	mrpl12	79	45.695	Pundamilia_nyererei
FBgn0011787	mRpL12	100	40.415	ENSPNAG00000003320	mrpl12	98	38.743	Pygocentrus_nattereri
FBgn0011787	mRpL12	73	42.446	ENSRNOG00000036695	Mrpl12	50	41.727	Rattus_norvegicus
FBgn0011787	mRpL12	73	43.066	ENSRBIG00000029573	MRPL12	89	37.912	Rhinopithecus_bieti
FBgn0011787	mRpL12	73	43.066	ENSRROG00000010180	MRPL12	89	37.912	Rhinopithecus_roxellana
FBgn0011787	mRpL12	79	40.385	YGL068W	-	79	39.355	Saccharomyces_cerevisiae
FBgn0011787	mRpL12	73	43.796	ENSSBOG00000033734	MRPL12	72	43.066	Saimiri_boliviensis_boliviensis
FBgn0011787	mRpL12	99	43.085	ENSSFOG00015023998	mrpl12	97	42.246	Scleropages_formosus
FBgn0011787	mRpL12	76	47.917	ENSSFOG00015023051	mrpl12	75	44.444	Scleropages_formosus
FBgn0011787	mRpL12	84	47.712	ENSSMAG00000001700	mrpl12	79	47.712	Scophthalmus_maximus
FBgn0011787	mRpL12	98	42.021	ENSSDUG00000014547	mrpl12	80	44.737	Seriola_dumerili
FBgn0011787	mRpL12	100	41.117	ENSSLDG00000003829	mrpl12	100	40.722	Seriola_lalandi_dorsalis
FBgn0011787	mRpL12	97	43.820	ENSSPUG00000011062	MRPL12	81	46.000	Sphenodon_punctatus
FBgn0011787	mRpL12	100	41.026	ENSSPAG00000010692	mrpl12	100	41.026	Stegastes_partitus
FBgn0011787	mRpL12	73	41.606	ENSSSCG00000033148	MRPL12	69	45.255	Sus_scrofa
FBgn0011787	mRpL12	100	39.378	ENSTRUG00000021764	mrpl12	78	40.415	Takifugu_rubripes
FBgn0011787	mRpL12	100	41.451	ENSTNIG00000010438	mrpl12	95	40.415	Tetraodon_nigroviridis
FBgn0011787	mRpL12	98	38.220	ENSTBEG00000010871	MRPL12	89	36.813	Tupaia_belangeri
FBgn0011787	mRpL12	73	43.796	ENSTTRG00000007611	MRPL12	92	39.344	Tursiops_truncatus
FBgn0011787	mRpL12	73	30.939	ENSUAMG00000016771	MRPL12	75	32.597	Ursus_americanus
FBgn0011787	mRpL12	73	40.580	ENSUMAG00000016332	MRPL12	58	42.029	Ursus_maritimus
FBgn0011787	mRpL12	98	38.798	ENSVVUG00000020000	MRPL12	89	39.130	Vulpes_vulpes
FBgn0011787	mRpL12	100	43.077	ENSXMAG00000028444	mrpl12	100	40.513	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003682	chromatin binding	16816001.	IGI	Function
GO:0003735	structural constituent of ribosome	11279069.	ISS	Function
GO:0003735	structural constituent of ribosome	17927810.	TAS	Function
GO:0005739	mitochondrion	19317464.	HDA	Component
GO:0005762	mitochondrial large ribosomal subunit	21873635.	IBA	Component
GO:0005762	mitochondrial large ribosomal subunit	11279069.	ISS	Component
GO:0005762	mitochondrial large ribosomal subunit	17927810.	TAS	Component
GO:0005763	mitochondrial small ribosomal subunit	-	ISS	Component
GO:0006390	mitochondrial transcription	21873635.	IBA	Process
GO:0006412	translation	11279069.	ISS	Process
GO:0007005	mitochondrion organization	15692573.	IMP	Process
GO:0030307	positive regulation of cell growth	15692573.	IMP	Process
GO:0032543	mitochondrial translation	17927810.	TAS	Process