EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: FBgn0011837 (Gene tree)
Gene ID: 32222
Gene Symbol: Tis11
Alias: -
Full Name: Tis11 zinc finger protein
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 23140 bases
Position: chrX:12659415-12682554
Accession: FBgn0011837
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0073516	zf-CCCH	PF00642.24	6.7e-18	1	2
FBpp0073516	zf-CCCH	PF00642.24	6.7e-18	2	2
FBpp0305898	zf-CCCH	PF00642.24	6.7e-18	1	2
FBpp0305898	zf-CCCH	PF00642.24	6.7e-18	2	2
FBpp0311375	zf-CCCH	PF00642.24	6.7e-18	1	2
FBpp0311375	zf-CCCH	PF00642.24	6.7e-18	2	2

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0073683	-	2157	-	FBpp0073516	436 (aa)	-	P47980
FBtr0333756	-	5009	-	FBpp0305898	436 (aa)	-	P47980
FBtr0345165	-	2023	-	FBpp0311375	436 (aa)	-	P47980

Gene Model

Click here to download FBgn0011837's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0011837's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003730	mRNA 3'-UTR binding	21873635.	IBA	Function
GO:0003730	mRNA 3'-UTR binding	22553461.	IDA	Function
GO:0005634	nucleus	-	ISS	Component
GO:0005829	cytosol	25294944.	HDA	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0010629	negative regulation of gene expression	22553461.	IDA	Process
GO:0016246	RNA interference	16882716.	IMP	Process
GO:0035925	mRNA 3'-UTR AU-rich region binding	25342740.	IDA	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:0061158	3'-UTR-mediated mRNA destabilization	21873635.	IBA	Process
GO:0061158	3'-UTR-mediated mRNA destabilization	22253700.	IDA	Process
GO:1900153	positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	25342740.	IMP	Process