EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0014023 (Gene tree)
Gene ID: 41141
Gene Symbol: mRpL47
Alias: -
Full Name: mitochondrial ribosomal protein L47
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 1087 bases
Position: chr3R:9514822-9515908
Accession: FBgn0014023
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0081599	MRP-L47	PF06984.13	1.3e-39	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0082121	-	905	-	FBpp0081599	271 (aa)	-	Q27370

Gene Model

Click here to download FBgn0014023's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0014023's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0014023	mRpL47	79	39.013	ENSG00000136522	MRPL47	88	40.488	Homo_sapiens
FBgn0014023	mRpL47	52	48.571	ENSAPOG00000014123	mrpl47	53	48.571	Acanthochromis_polyacanthus
FBgn0014023	mRpL47	53	45.833	ENSAMEG00000010876	MRPL47	57	45.833	Ailuropoda_melanoleuca
FBgn0014023	mRpL47	53	49.306	ENSACIG00000012703	mrpl47	56	49.306	Amphilophus_citrinellus
FBgn0014023	mRpL47	53	47.222	ENSAOCG00000008347	mrpl47	55	47.222	Amphiprion_ocellaris
FBgn0014023	mRpL47	53	47.222	ENSAPEG00000005830	mrpl47	55	47.222	Amphiprion_percula
FBgn0014023	mRpL47	52	48.571	ENSATEG00000009838	mrpl47	54	48.571	Anabas_testudineus
FBgn0014023	mRpL47	55	44.667	ENSAPLG00000011793	MRPL47	93	40.609	Anas_platyrhynchos
FBgn0014023	mRpL47	64	36.994	ENSANAG00000029476	-	72	34.921	Aotus_nancymaae
FBgn0014023	mRpL47	51	48.175	ENSANAG00000037296	-	58	48.175	Aotus_nancymaae
FBgn0014023	mRpL47	71	40.704	ENSACLG00000019621	mrpl47	80	40.704	Astatotilapia_calliptera
FBgn0014023	mRpL47	51	49.635	ENSAMXG00000011888	mrpl47	55	49.635	Astyanax_mexicanus
FBgn0014023	mRpL47	76	38.095	ENSBTAG00000002462	MRPL47	83	38.095	Bos_taurus
FBgn0014023	mRpL47	65	35.676	WBGene00015092	mrpl-47	84	35.676	Caenorhabditis_elegans
FBgn0014023	mRpL47	60	41.718	ENSCJAG00000014820	-	73	38.503	Callithrix_jacchus
FBgn0014023	mRpL47	64	43.353	ENSCJAG00000013028	-	75	40.741	Callithrix_jacchus
FBgn0014023	mRpL47	53	45.833	ENSCAFG00000011380	MRPL47	57	45.833	Canis_familiaris
FBgn0014023	mRpL47	53	45.833	ENSCAFG00020023127	MRPL47	57	45.833	Canis_lupus_dingo
FBgn0014023	mRpL47	81	36.937	ENSCHIG00000013922	MRPL47	83	36.937	Capra_hircus
FBgn0014023	mRpL47	57	39.490	ENSTSYG00000032115	-	70	39.490	Carlito_syrichta
FBgn0014023	mRpL47	59	44.720	ENSTSYG00000001541	-	68	43.275	Carlito_syrichta
FBgn0014023	mRpL47	53	45.833	ENSCPOG00000002312	-	57	45.833	Cavia_porcellus
FBgn0014023	mRpL47	53	40.278	ENSCPOG00000024304	-	59	40.278	Cavia_porcellus
FBgn0014023	mRpL47	73	41.063	ENSCCAG00000037348	MRPL47	88	39.013	Cebus_capucinus
FBgn0014023	mRpL47	79	38.117	ENSCATG00000020336	-	88	38.117	Cercocebus_atys
FBgn0014023	mRpL47	53	45.833	ENSCLAG00000017681	-	70	42.045	Chinchilla_lanigera
FBgn0014023	mRpL47	53	45.833	ENSCLAG00000017678	-	70	42.045	Chinchilla_lanigera
FBgn0014023	mRpL47	63	42.135	ENSCLAG00000015039	-	71	42.135	Chinchilla_lanigera
FBgn0014023	mRpL47	79	38.565	ENSCSAG00000013046	-	88	38.565	Chlorocebus_sabaeus
FBgn0014023	mRpL47	70	42.132	ENSCSAG00000010884	-	81	42.132	Chlorocebus_sabaeus
FBgn0014023	mRpL47	83	37.391	ENSCPBG00000026934	MRPL47	91	37.391	Chrysemys_picta_bellii
FBgn0014023	mRpL47	54	46.207	ENSCING00000001800	-	52	46.207	Ciona_intestinalis
FBgn0014023	mRpL47	63	44.318	ENSCGRG00001015111	Mrpl47	70	44.318	Cricetulus_griseus_chok1gshd
FBgn0014023	mRpL47	63	44.318	ENSCGRG00000017426	Mrpl47	70	44.318	Cricetulus_griseus_crigri
FBgn0014023	mRpL47	55	45.333	ENSCSEG00000013581	mrpl47	58	45.333	Cynoglossus_semilaevis
FBgn0014023	mRpL47	51	51.095	ENSCVAG00000007629	mrpl47	53	51.095	Cyprinodon_variegatus
FBgn0014023	mRpL47	51	48.905	ENSDARG00000075743	mrpl47	55	48.905	Danio_rerio
FBgn0014023	mRpL47	70	39.691	ENSDNOG00000015052	MRPL47	75	39.691	Dasypus_novemcinctus
FBgn0014023	mRpL47	66	44.382	ENSDORG00000007650	Mrpl47	76	44.382	Dipodomys_ordii
FBgn0014023	mRpL47	70	40.206	ENSETEG00000019362	MRPL47	77	40.206	Echinops_telfairi
FBgn0014023	mRpL47	53	44.828	ENSEBUG00000014208	mrpl47	58	44.828	Eptatretus_burgeri
FBgn0014023	mRpL47	56	44.872	ENSEASG00005016858	MRPL47	62	44.872	Equus_asinus_asinus
FBgn0014023	mRpL47	67	40.642	ENSECAG00000018545	MRPL47	75	40.642	Equus_caballus
FBgn0014023	mRpL47	67	44.505	ENSELUG00000004619	mrpl47	70	44.505	Esox_lucius
FBgn0014023	mRpL47	58	43.949	ENSFCAG00000039093	MRPL47	62	43.949	Felis_catus
FBgn0014023	mRpL47	75	41.872	ENSFALG00000008365	MRPL47	88	41.872	Ficedula_albicollis
FBgn0014023	mRpL47	58	44.586	ENSFDAG00000014402	MRPL47	65	44.586	Fukomys_damarensis
FBgn0014023	mRpL47	69	40.865	ENSFHEG00000007456	mrpl47	76	40.865	Fundulus_heteroclitus
FBgn0014023	mRpL47	59	44.375	ENSGMOG00000017332	mrpl47	72	44.375	Gadus_morhua
FBgn0014023	mRpL47	65	42.938	ENSGALG00000013759	MRPL47	75	39.153	Gallus_gallus
FBgn0014023	mRpL47	53	47.917	ENSGAFG00000013445	mrpl47	56	47.917	Gambusia_affinis
FBgn0014023	mRpL47	58	44.785	ENSGACG00000009992	mrpl47	69	44.785	Gasterosteus_aculeatus
FBgn0014023	mRpL47	52	45.714	ENSGAGG00000016462	MRPL47	58	45.714	Gopherus_agassizii
FBgn0014023	mRpL47	79	39.013	ENSGGOG00000027171	MRPL47	91	40.796	Gorilla_gorilla
FBgn0014023	mRpL47	53	47.917	ENSHBUG00000022567	mrpl47	54	47.917	Haplochromis_burtoni
FBgn0014023	mRpL47	56	44.937	ENSHGLG00000012776	-	65	44.937	Heterocephalus_glaber_female
FBgn0014023	mRpL47	58	43.949	ENSHGLG00000013945	MRPL47	75	41.799	Heterocephalus_glaber_female
FBgn0014023	mRpL47	58	43.949	ENSHGLG00100003873	MRPL47	75	41.799	Heterocephalus_glaber_male
FBgn0014023	mRpL47	56	44.937	ENSHGLG00100018544	-	69	44.937	Heterocephalus_glaber_male
FBgn0014023	mRpL47	70	42.408	ENSHCOG00000018946	mrpl47	73	42.408	Hippocampus_comes
FBgn0014023	mRpL47	51	49.635	ENSIPUG00000009200	mrpl47	55	49.635	Ictalurus_punctatus
FBgn0014023	mRpL47	55	45.333	ENSJJAG00000020002	Mrpl47	60	45.333	Jaculus_jaculus
FBgn0014023	mRpL47	51	51.095	ENSKMAG00000022044	mrpl47	54	51.095	Kryptolebias_marmoratus
FBgn0014023	mRpL47	83	36.123	ENSLACG00000014781	MRPL47	82	36.123	Latimeria_chalumnae
FBgn0014023	mRpL47	53	46.528	ENSLOCG00000001289	mrpl47	57	46.528	Lepisosteus_oculatus
FBgn0014023	mRpL47	70	39.796	ENSLAFG00000018470	MRPL47	94	35.124	Loxodonta_africana
FBgn0014023	mRpL47	73	40.796	ENSMFAG00000000293	MRPL47	91	40.796	Macaca_fascicularis
FBgn0014023	mRpL47	73	37.811	ENSMFAG00000039679	-	90	37.811	Macaca_fascicularis
FBgn0014023	mRpL47	79	39.013	ENSMMUG00000009744	MRPL47	88	39.013	Macaca_mulatta
FBgn0014023	mRpL47	73	32.836	ENSMNEG00000043074	-	89	32.836	Macaca_nemestrina
FBgn0014023	mRpL47	79	39.013	ENSMNEG00000001870	-	91	40.796	Macaca_nemestrina
FBgn0014023	mRpL47	73	39.801	ENSMLEG00000036668	-	90	39.801	Mandrillus_leucophaeus
FBgn0014023	mRpL47	54	46.753	ENSMLEG00000035312	-	70	46.753	Mandrillus_leucophaeus
FBgn0014023	mRpL47	59	46.250	ENSMAMG00000006129	mrpl47	53	46.250	Mastacembelus_armatus
FBgn0014023	mRpL47	53	47.917	ENSMZEG00005002155	mrpl47	56	47.917	Maylandia_zebra
FBgn0014023	mRpL47	85	38.298	ENSMAUG00000010772	Mrpl47	91	38.298	Mesocricetus_auratus
FBgn0014023	mRpL47	53	46.528	ENSMICG00000049377	MRPL47	57	46.528	Microcebus_murinus
FBgn0014023	mRpL47	91	35.317	ENSMOCG00000007933	-	94	35.317	Microtus_ochrogaster
FBgn0014023	mRpL47	54	41.379	ENSMOCG00000001968	-	62	41.379	Microtus_ochrogaster
FBgn0014023	mRpL47	57	48.077	ENSMMOG00000019550	mrpl47	69	48.077	Mola_mola
FBgn0014023	mRpL47	69	42.021	ENSMODG00000021301	MRPL47	83	42.021	Monodelphis_domestica
FBgn0014023	mRpL47	53	45.833	ENSMALG00000017640	mrpl47	54	45.833	Monopterus_albus
FBgn0014023	mRpL47	68	44.385	MGP_CAROLIEiJ_G0024921	Mrpl47	73	44.385	Mus_caroli
FBgn0014023	mRpL47	68	43.316	ENSMUSG00000037531	Mrpl47	73	43.316	Mus_musculus
FBgn0014023	mRpL47	68	42.408	MGP_PahariEiJ_G0026366	Mrpl47	75	42.408	Mus_pahari
FBgn0014023	mRpL47	76	39.906	MGP_SPRETEiJ_G0025855	Mrpl47	83	39.906	Mus_spretus
FBgn0014023	mRpL47	53	45.139	ENSMPUG00000017214	MRPL47	57	45.139	Mustela_putorius_furo
FBgn0014023	mRpL47	71	38.614	ENSMLUG00000000996	MRPL47	80	38.614	Myotis_lucifugus
FBgn0014023	mRpL47	72	39.594	ENSNGAG00000022354	Mrpl47	77	39.594	Nannospalax_galili
FBgn0014023	mRpL47	53	48.611	ENSNBRG00000017251	mrpl47	56	48.611	Neolamprologus_brichardi
FBgn0014023	mRpL47	53	48.611	ENSNBRG00000004178	mrpl47	56	48.611	Neolamprologus_brichardi
FBgn0014023	mRpL47	73	41.294	ENSNLEG00000005831	MRPL47	91	41.294	Nomascus_leucogenys
FBgn0014023	mRpL47	51	40.876	ENSMEUG00000012649	-	93	34.715	Notamacropus_eugenii
FBgn0014023	mRpL47	58	41.509	ENSOPRG00000007831	MRPL47	72	41.509	Ochotona_princeps
FBgn0014023	mRpL47	63	39.773	ENSODEG00000017632	-	69	39.773	Octodon_degus
FBgn0014023	mRpL47	53	47.917	ENSONIG00000001683	mrpl47	56	47.917	Oreochromis_niloticus
FBgn0014023	mRpL47	70	40.000	ENSOANG00000002136	-	76	40.000	Ornithorhynchus_anatinus
FBgn0014023	mRpL47	70	39.267	ENSOCUG00000017886	MRPL47	75	39.267	Oryctolagus_cuniculus
FBgn0014023	mRpL47	57	45.283	ENSORLG00000023413	mrpl47	62	45.283	Oryzias_latipes
FBgn0014023	mRpL47	57	45.283	ENSORLG00020021449	mrpl47	62	45.283	Oryzias_latipes_hni
FBgn0014023	mRpL47	53	46.939	ENSORLG00015018692	mrpl47	62	45.283	Oryzias_latipes_hsok
FBgn0014023	mRpL47	69	43.386	ENSOMEG00000014147	mrpl47	71	43.386	Oryzias_melastigma
FBgn0014023	mRpL47	53	46.528	ENSOGAG00000016957	MRPL47	58	46.528	Otolemur_garnettii
FBgn0014023	mRpL47	81	36.937	ENSOARG00000020692	MRPL47	82	36.937	Ovis_aries
FBgn0014023	mRpL47	79	39.013	ENSPPAG00000028033	MRPL47	91	40.796	Pan_paniscus
FBgn0014023	mRpL47	68	41.398	ENSPPRG00000000050	MRPL47	74	41.398	Panthera_pardus
FBgn0014023	mRpL47	58	43.949	ENSPTIG00000007879	MRPL47	62	43.949	Panthera_tigris_altaica
FBgn0014023	mRpL47	79	39.013	ENSPTRG00000015648	MRPL47	91	40.796	Pan_troglodytes
FBgn0014023	mRpL47	79	39.013	ENSPANG00000008191	MRPL47	91	40.796	Papio_anubis
FBgn0014023	mRpL47	61	44.311	ENSPKIG00000012608	mrpl47	74	41.885	Paramormyrops_kingsleyae
FBgn0014023	mRpL47	53	41.667	ENSPSIG00000011536	MRPL47	78	35.450	Pelodiscus_sinensis
FBgn0014023	mRpL47	58	47.468	ENSPMAG00000001838	mrpl47	62	47.468	Petromyzon_marinus
FBgn0014023	mRpL47	60	38.788	ENSPCIG00000026899	-	78	34.742	Phascolarctos_cinereus
FBgn0014023	mRpL47	51	49.635	ENSPCIG00000006780	-	77	40.933	Phascolarctos_cinereus
FBgn0014023	mRpL47	51	48.905	ENSPFOG00000014965	mrpl47	53	48.905	Poecilia_formosa
FBgn0014023	mRpL47	51	48.905	ENSPLAG00000011483	mrpl47	53	48.905	Poecilia_latipinna
FBgn0014023	mRpL47	51	48.905	ENSPMEG00000012490	mrpl47	53	48.905	Poecilia_mexicana
FBgn0014023	mRpL47	51	49.635	ENSPREG00000015080	mrpl47	53	49.635	Poecilia_reticulata
FBgn0014023	mRpL47	79	39.013	ENSPPYG00000014321	MRPL47	88	39.013	Pongo_abelii
FBgn0014023	mRpL47	53	45.833	ENSPCAG00000016517	MRPL47	83	40.110	Procavia_capensis
FBgn0014023	mRpL47	53	45.833	ENSPCOG00000019367	MRPL47	58	45.833	Propithecus_coquereli
FBgn0014023	mRpL47	53	46.528	ENSPVAG00000004284	MRPL47	58	46.528	Pteropus_vampyrus
FBgn0014023	mRpL47	53	47.917	ENSPNYG00000005479	mrpl47	56	47.917	Pundamilia_nyererei
FBgn0014023	mRpL47	53	47.917	ENSPNAG00000026692	mrpl47	57	47.917	Pygocentrus_nattereri
FBgn0014023	mRpL47	74	40.670	ENSRNOG00000011639	Mrpl47	81	40.670	Rattus_norvegicus
FBgn0014023	mRpL47	73	40.580	ENSRBIG00000030725	MRPL47	87	40.580	Rhinopithecus_bieti
FBgn0014023	mRpL47	73	40.580	ENSRROG00000034003	MRPL47	91	40.299	Rhinopithecus_roxellana
FBgn0014023	mRpL47	73	41.063	ENSSBOG00000018241	MRPL47	88	39.013	Saimiri_boliviensis_boliviensis
FBgn0014023	mRpL47	73	42.211	ENSSHAG00000017273	MRPL47	80	42.211	Sarcophilus_harrisii
FBgn0014023	mRpL47	63	41.436	ENSSFOG00015017849	mrpl47	68	41.436	Scleropages_formosus
FBgn0014023	mRpL47	53	47.222	ENSSMAG00000003013	mrpl47	53	47.222	Scophthalmus_maximus
FBgn0014023	mRpL47	53	47.917	ENSSDUG00000003140	mrpl47	56	47.917	Seriola_dumerili
FBgn0014023	mRpL47	53	47.917	ENSSLDG00000017795	mrpl47	56	47.917	Seriola_lalandi_dorsalis
FBgn0014023	mRpL47	76	37.561	ENSSARG00000006898	-	76	37.561	Sorex_araneus
FBgn0014023	mRpL47	74	42.786	ENSSPUG00000014635	MRPL47	77	42.786	Sphenodon_punctatus
FBgn0014023	mRpL47	52	50.714	ENSSPAG00000002660	mrpl47	53	50.714	Stegastes_partitus
FBgn0014023	mRpL47	68	43.850	ENSSSCG00000011763	MRPL47	73	43.850	Sus_scrofa
FBgn0014023	mRpL47	65	40.571	ENSTGUG00000014708	-	99	40.571	Taeniopygia_guttata
FBgn0014023	mRpL47	75	42.857	ENSTGUG00000010649	-	88	42.857	Taeniopygia_guttata
FBgn0014023	mRpL47	59	41.975	ENSTRUG00000017597	mrpl47	59	41.975	Takifugu_rubripes
FBgn0014023	mRpL47	71	41.753	ENSTNIG00000015545	mrpl47	86	41.753	Tetraodon_nigroviridis
FBgn0014023	mRpL47	51	37.956	ENSTBEG00000004852	-	85	31.746	Tupaia_belangeri
FBgn0014023	mRpL47	68	37.433	ENSTTRG00000008909	MRPL47	73	37.433	Tursiops_truncatus
FBgn0014023	mRpL47	58	43.949	ENSUAMG00000007563	MRPL47	70	43.949	Ursus_americanus
FBgn0014023	mRpL47	53	45.833	ENSUMAG00000007554	MRPL47	57	45.833	Ursus_maritimus
FBgn0014023	mRpL47	59	43.902	ENSVPAG00000006633	MRPL47	66	43.902	Vicugna_pacos
FBgn0014023	mRpL47	53	45.833	ENSVVUG00000004837	MRPL47	57	45.833	Vulpes_vulpes
FBgn0014023	mRpL47	57	46.154	ENSXCOG00000002915	mrpl47	60	46.154	Xiphophorus_couchianus
FBgn0014023	mRpL47	51	48.905	ENSXMAG00000018249	mrpl47	53	48.905	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	11551941.	ISS	Function
GO:0003735	structural constituent of ribosome	17927810.	TAS	Function
GO:0005762	mitochondrial large ribosomal subunit	21873635.	IBA	Component
GO:0005762	mitochondrial large ribosomal subunit	11551941.	ISS	Component
GO:0005762	mitochondrial large ribosomal subunit	17927810.	TAS	Component
GO:0032543	mitochondrial translation	21873635.	IBA	Process
GO:0032543	mitochondrial translation	17927810.	TAS	Process