EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0014026 (Gene tree)
Gene ID: 31588
Gene Symbol: RpL7A
Alias: -
Full Name: Ribosomal protein L7A
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 2452 bases
Position: chrX:6530897-6533348
Accession: FBgn0014026
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0070877	Ribosomal_L7Ae	PF01248.26	4.8e-25	1	1
FBpp0070878	Ribosomal_L7Ae	PF01248.26	4.8e-25	1	1
FBpp0309986	Ribosomal_L7Ae	PF01248.26	4.8e-25	1	1
FBpp0309987	Ribosomal_L7Ae	PF01248.26	4.8e-25	1	1
FBpp0311460	Ribosomal_L7Ae	PF01248.26	4.8e-25	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0070915	-	1124	-	FBpp0070877	271 (aa)	-	P46223
FBtr0070916	-	1100	-	FBpp0070878	271 (aa)	-	P46223
FBtr0343328	-	1011	-	FBpp0309986	271 (aa)	-	P46223
FBtr0343329	-	1130	-	FBpp0309987	271 (aa)	-	P46223
FBtr0345293	-	971	-	FBpp0311460	271 (aa)	-	P46223

Gene Model

Click here to download FBgn0014026's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0014026's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0014026	RpL7A	92	58.800	WBGene00004419	rpl-7A	94	58.800	Caenorhabditis_elegans
FBgn0014026	RpL7A	93	55.859	YLL045C	RPL8B	97	55.336	Saccharomyces_cerevisiae
FBgn0014026	RpL7A	93	56.641	YHL033C	RPL8A	97	56.126	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000470	maturation of LSU-rRNA	21873635.	IBA	Process
GO:0002181	cytoplasmic translation	16889426.	IC	Process
GO:0002181	cytoplasmic translation	17927810.	TAS	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	16889426.	HDA	Function
GO:0003735	structural constituent of ribosome	17927810.	TAS	Function
GO:0022625	cytosolic large ribosomal subunit	21873635.	IBA	Component
GO:0022625	cytosolic large ribosomal subunit	17927810.	TAS	Component
GO:0022626	cytosolic ribosome	16889426.	HDA	Component