EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0015331 (Gene tree)
Gene ID: 40530
Gene Symbol: abs
Alias: -
Full Name: abstrakt
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 1995 bases
Position: chr3R:4233047-4235041
Accession: FBgn0015331
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0078606	DEAD	PF00270.29	4.8e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0078967	-	1995	-	FBpp0078606	619 (aa)	-	Q9V3C0

Gene Model

Click here to download FBgn0015331's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0015331's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0015331	abs	64	37.656	FBgn0283442	vas	59	38.035
FBgn0015331	abs	62	30.809	FBgn0037573	CG7483	92	30.809
FBgn0015331	abs	69	38.051	FBgn0035720	CG10077	74	36.667
FBgn0015331	abs	57	32.958	FBgn0004419	me31B	79	32.958
FBgn0015331	abs	54	35.652	FBgn0032919	CG9253	64	35.174
FBgn0015331	abs	66	30.714	FBgn0036754	CG5589	68	30.714
FBgn0015331	abs	57	30.000	FBgn0086130	Dbp21E2	67	30.000
FBgn0015331	abs	64	39.302	FBgn0032690	CG10333	51	39.302
FBgn0015331	abs	62	31.172	FBgn0037561	CG9630	63	31.172
FBgn0015331	abs	66	39.161	FBgn0263231	bel	55	38.889
FBgn0015331	abs	69	34.389	FBgn0037549	CG7878	61	34.389
FBgn0015331	abs	58	33.516	FBgn0266581	pit	52	33.516
FBgn0015331	abs	56	32.591	FBgn0010220	Dbp45A	65	32.591
FBgn0015331	abs	70	37.642	FBgn0036104	CG6418	54	37.642
FBgn0015331	abs	67	38.732	FBgn0003261	Rm62	76	37.916

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0015331	abs	96	66.499	ENSG00000183258	DDX41	96	66.557	Homo_sapiens
FBgn0015331	abs	98	66.776	ENSAPOG00000000935	DDX41	97	66.776	Acanthochromis_polyacanthus
FBgn0015331	abs	96	65.943	ENSAMEG00000018051	DDX41	97	65.957	Ailuropoda_melanoleuca
FBgn0015331	abs	97	66.833	ENSACIG00000008618	DDX41	99	66.833	Amphilophus_citrinellus
FBgn0015331	abs	98	66.776	ENSAOCG00000011755	DDX41	97	66.776	Amphiprion_ocellaris
FBgn0015331	abs	98	66.776	ENSAPEG00000013433	DDX41	97	66.776	Amphiprion_percula
FBgn0015331	abs	98	66.283	ENSATEG00000003317	DDX41	97	66.283	Anabas_testudineus
FBgn0015331	abs	85	64.595	ENSAPLG00000015985	-	100	64.595	Anas_platyrhynchos
FBgn0015331	abs	96	66.277	ENSACAG00000005778	DDX41	97	65.323	Anolis_carolinensis
FBgn0015331	abs	96	66.332	ENSANAG00000035879	DDX41	97	66.392	Aotus_nancymaae
FBgn0015331	abs	99	65.210	ENSACLG00000003778	DDX41	98	65.210	Astatotilapia_calliptera
FBgn0015331	abs	99	65.909	ENSAMXG00000002956	DDX41	99	65.909	Astyanax_mexicanus
FBgn0015331	abs	96	66.332	ENSBTAG00000015187	DDX41	97	65.957	Bos_taurus
FBgn0015331	abs	85	58.412	WBGene00019245	sacy-1	95	53.566	Caenorhabditis_elegans
FBgn0015331	abs	96	66.499	ENSCJAG00000006595	DDX41	96	66.557	Callithrix_jacchus
FBgn0015331	abs	96	66.499	ENSCAFG00000016304	DDX41	97	65.957	Canis_familiaris
FBgn0015331	abs	96	66.499	ENSCAFG00020012019	DDX41	97	65.957	Canis_lupus_dingo
FBgn0015331	abs	96	66.499	ENSCHIG00000009756	DDX41	97	65.957	Capra_hircus
FBgn0015331	abs	96	65.772	ENSTSYG00000033318	DDX41	96	65.677	Carlito_syrichta
FBgn0015331	abs	84	70.363	ENSCAPG00000011375	DDX41	100	70.363	Cavia_aperea
FBgn0015331	abs	96	66.499	ENSCPOG00000008770	DDX41	98	65.056	Cavia_porcellus
FBgn0015331	abs	96	66.332	ENSCCAG00000036188	DDX41	97	66.392	Cebus_capucinus
FBgn0015331	abs	96	66.332	ENSCATG00000013983	DDX41	96	66.392	Cercocebus_atys
FBgn0015331	abs	96	65.776	ENSCLAG00000015404	DDX41	96	65.846	Chinchilla_lanigera
FBgn0015331	abs	96	66.332	ENSCSAG00000008742	DDX41	96	66.392	Chlorocebus_sabaeus
FBgn0015331	abs	92	67.832	ENSCPBG00000022192	DDX41	99	67.832	Chrysemys_picta_bellii
FBgn0015331	abs	96	62.046	ENSCING00000008215	zf(cchc)-20	99	61.624	Ciona_intestinalis
FBgn0015331	abs	96	66.332	ENSCANG00000006524	DDX41	95	66.392	Colobus_angolensis_palliatus
FBgn0015331	abs	96	66.499	ENSCGRG00001017112	Ddx41	94	66.557	Cricetulus_griseus_chok1gshd
FBgn0015331	abs	96	66.499	ENSCGRG00000007688	Ddx41	96	66.557	Cricetulus_griseus_crigri
FBgn0015331	abs	97	64.039	ENSCSEG00000013051	DDX41	99	64.039	Cynoglossus_semilaevis
FBgn0015331	abs	99	59.024	ENSCVAG00000014462	DDX41	98	59.187	Cyprinodon_variegatus
FBgn0015331	abs	96	65.442	ENSDNOG00000046583	DDX41	96	65.681	Dasypus_novemcinctus
FBgn0015331	abs	96	66.499	ENSDORG00000010781	Ddx41	96	66.392	Dipodomys_ordii
FBgn0015331	abs	70	66.898	ENSETEG00000012955	-	69	66.898	Echinops_telfairi
FBgn0015331	abs	96	66.107	ENSEBUG00000002053	DDX41	99	65.785	Eptatretus_burgeri
FBgn0015331	abs	96	66.499	ENSEASG00005012427	DDX41	96	66.557	Equus_asinus_asinus
FBgn0015331	abs	96	66.499	ENSECAG00000009688	DDX41	96	66.557	Equus_caballus
FBgn0015331	abs	91	61.444	ENSEEUG00000001733	DDX41	99	61.444	Erinaceus_europaeus
FBgn0015331	abs	99	65.579	ENSELUG00000019496	DDX41	98	65.579	Esox_lucius
FBgn0015331	abs	96	65.776	ENSFCAG00000001542	DDX41	99	65.579	Felis_catus
FBgn0015331	abs	99	66.234	ENSFALG00000008731	DDX41	99	66.234	Ficedula_albicollis
FBgn0015331	abs	96	65.776	ENSFDAG00000017597	DDX41	96	65.846	Fukomys_damarensis
FBgn0015331	abs	98	66.447	ENSFHEG00000008904	DDX41	97	66.447	Fundulus_heteroclitus
FBgn0015331	abs	97	62.748	ENSGMOG00000006670	DDX41	98	62.748	Gadus_morhua
FBgn0015331	abs	99	65.913	ENSGALG00000042994	DDX41	99	65.913	Gallus_gallus
FBgn0015331	abs	98	66.447	ENSGAFG00000005980	DDX41	97	66.447	Gambusia_affinis
FBgn0015331	abs	99	64.506	ENSGACG00000018334	DDX41	99	64.506	Gasterosteus_aculeatus
FBgn0015331	abs	91	67.782	ENSGAGG00000018601	DDX41	98	67.782	Gopherus_agassizii
FBgn0015331	abs	96	66.499	ENSGGOG00000014484	DDX41	96	66.557	Gorilla_gorilla
FBgn0015331	abs	99	65.210	ENSHBUG00000010971	DDX41	98	65.210	Haplochromis_burtoni
FBgn0015331	abs	99	64.573	ENSHGLG00000015092	DDX41	98	64.895	Heterocephalus_glaber_female
FBgn0015331	abs	88	56.066	ENSHGLG00000014198	-	91	54.641	Heterocephalus_glaber_female
FBgn0015331	abs	99	64.573	ENSHGLG00100018132	DDX41	98	64.895	Heterocephalus_glaber_male
FBgn0015331	abs	75	60.845	ENSHGLG00100002631	-	90	60.845	Heterocephalus_glaber_male
FBgn0015331	abs	99	65.210	ENSHCOG00000004725	DDX41	99	65.210	Hippocampus_comes
FBgn0015331	abs	99	65.909	ENSIPUG00000016171	ddx41	99	65.909	Ictalurus_punctatus
FBgn0015331	abs	96	66.834	ENSSTOG00000003171	DDX41	96	66.886	Ictidomys_tridecemlineatus
FBgn0015331	abs	96	66.499	ENSJJAG00000010470	Ddx41	97	66.557	Jaculus_jaculus
FBgn0015331	abs	98	66.447	ENSKMAG00000019331	DDX41	97	66.447	Kryptolebias_marmoratus
FBgn0015331	abs	98	65.954	ENSLBEG00000028087	DDX41	97	65.954	Labrus_bergylta
FBgn0015331	abs	99	65.858	ENSLACG00000012899	DDX41	99	65.909	Latimeria_chalumnae
FBgn0015331	abs	99	66.016	ENSLOCG00000011956	DDX41	99	66.016	Lepisosteus_oculatus
FBgn0015331	abs	95	66.837	ENSLAFG00000026418	DDX41	96	66.890	Loxodonta_africana
FBgn0015331	abs	96	66.332	ENSMFAG00000031761	DDX41	96	66.392	Macaca_fascicularis
FBgn0015331	abs	96	66.332	ENSMMUG00000016911	DDX41	96	66.392	Macaca_mulatta
FBgn0015331	abs	96	66.332	ENSMNEG00000028476	DDX41	96	66.392	Macaca_nemestrina
FBgn0015331	abs	96	66.332	ENSMLEG00000040870	DDX41	96	66.392	Mandrillus_leucophaeus
FBgn0015331	abs	99	65.210	ENSMAMG00000011237	DDX41	98	65.210	Mastacembelus_armatus
FBgn0015331	abs	99	65.210	ENSMZEG00005009983	DDX41	98	65.210	Maylandia_zebra
FBgn0015331	abs	99	66.074	ENSMGAG00000004050	DDX41	99	66.074	Meleagris_gallopavo
FBgn0015331	abs	96	66.332	ENSMAUG00000008134	Ddx41	96	66.392	Mesocricetus_auratus
FBgn0015331	abs	96	66.667	ENSMICG00000007919	DDX41	96	66.722	Microcebus_murinus
FBgn0015331	abs	96	66.499	ENSMOCG00000010015	Ddx41	96	66.557	Microtus_ochrogaster
FBgn0015331	abs	98	66.447	ENSMMOG00000009039	DDX41	97	66.447	Mola_mola
FBgn0015331	abs	91	67.958	ENSMODG00000004714	DDX41	98	67.958	Monodelphis_domestica
FBgn0015331	abs	96	67.002	ENSMALG00000003224	DDX41	100	67.002	Monopterus_albus
FBgn0015331	abs	96	66.499	MGP_CAROLIEiJ_G0018568	Ddx41	96	66.557	Mus_caroli
FBgn0015331	abs	96	66.499	ENSMUSG00000021494	Ddx41	96	66.557	Mus_musculus
FBgn0015331	abs	96	66.499	MGP_PahariEiJ_G0019633	Ddx41	96	66.557	Mus_pahari
FBgn0015331	abs	96	66.499	MGP_SPRETEiJ_G0019448	Ddx41	96	66.557	Mus_spretus
FBgn0015331	abs	96	66.499	ENSMPUG00000012792	DDX41	97	66.121	Mustela_putorius_furo
FBgn0015331	abs	96	66.110	ENSMLUG00000006610	DDX41	96	66.338	Myotis_lucifugus
FBgn0015331	abs	96	66.499	ENSNGAG00000022111	Ddx41	97	66.230	Nannospalax_galili
FBgn0015331	abs	99	65.534	ENSNBRG00000015087	DDX41	98	65.534	Neolamprologus_brichardi
FBgn0015331	abs	96	56.951	ENSNLEG00000012844	DDX41	96	57.166	Nomascus_leucogenys
FBgn0015331	abs	96	67.337	ENSMEUG00000014375	DDX41	96	67.162	Notamacropus_eugenii
FBgn0015331	abs	81	69.800	ENSOPRG00000016604	DDX41	81	69.800	Ochotona_princeps
FBgn0015331	abs	96	65.776	ENSODEG00000008505	DDX41	98	64.734	Octodon_degus
FBgn0015331	abs	99	65.323	ENSONIG00000017785	DDX41	98	65.323	Oreochromis_niloticus
FBgn0015331	abs	97	57.825	ENSOANG00000009671	DDX41	96	57.825	Ornithorhynchus_anatinus
FBgn0015331	abs	85	67.235	ENSOCUG00000023209	DDX41	94	67.424	Oryctolagus_cuniculus
FBgn0015331	abs	98	66.886	ENSORLG00000006688	DDX41	97	66.886	Oryzias_latipes
FBgn0015331	abs	98	66.886	ENSORLG00020008411	DDX41	97	66.886	Oryzias_latipes_hni
FBgn0015331	abs	98	66.722	ENSORLG00015004882	DDX41	97	66.722	Oryzias_latipes_hsok
FBgn0015331	abs	98	66.886	ENSOMEG00000009020	DDX41	97	66.886	Oryzias_melastigma
FBgn0015331	abs	98	66.557	ENSOGAG00000011123	-	96	66.722	Otolemur_garnettii
FBgn0015331	abs	80	59.356	ENSOGAG00000029024	-	100	59.356	Otolemur_garnettii
FBgn0015331	abs	96	66.499	ENSOARG00000005568	DDX41	97	65.957	Ovis_aries
FBgn0015331	abs	96	66.499	ENSPPAG00000029499	DDX41	97	66.557	Pan_paniscus
FBgn0015331	abs	96	65.776	ENSPPRG00000001013	DDX41	97	65.579	Panthera_pardus
FBgn0015331	abs	96	65.776	ENSPTIG00000020225	DDX41	97	65.579	Panthera_tigris_altaica
FBgn0015331	abs	96	66.499	ENSPTRG00000017589	DDX41	97	66.557	Pan_troglodytes
FBgn0015331	abs	96	66.332	ENSPANG00000012013	DDX41	96	66.392	Papio_anubis
FBgn0015331	abs	97	66.500	ENSPKIG00000007704	DDX41	96	66.611	Paramormyrops_kingsleyae
FBgn0015331	abs	80	58.167	ENSPSIG00000005060	DDX41	99	58.167	Pelodiscus_sinensis
FBgn0015331	abs	50	59.509	ENSPMGG00000012529	DDX41	100	59.509	Periophthalmus_magnuspinnatus
FBgn0015331	abs	96	66.332	ENSPEMG00000000049	Ddx41	96	66.392	Peromyscus_maniculatus_bairdii
FBgn0015331	abs	99	65.378	ENSPCIG00000002296	DDX41	97	65.378	Phascolarctos_cinereus
FBgn0015331	abs	97	66.833	ENSPFOG00000024441	DDX41	99	65.478	Poecilia_formosa
FBgn0015331	abs	97	66.778	ENSPLAG00000011231	DDX41	99	65.422	Poecilia_latipinna
FBgn0015331	abs	97	66.778	ENSPMEG00000003394	DDX41	99	65.422	Poecilia_mexicana
FBgn0015331	abs	98	66.612	ENSPREG00000005321	DDX41	97	66.612	Poecilia_reticulata
FBgn0015331	abs	96	65.391	ENSPPYG00000016097	DDX41	96	65.303	Pongo_abelii
FBgn0015331	abs	77	66.667	ENSPCAG00000009363	DDX41	78	66.667	Procavia_capensis
FBgn0015331	abs	96	66.667	ENSPCOG00000023131	DDX41	95	66.722	Propithecus_coquereli
FBgn0015331	abs	98	62.500	ENSPVAG00000007784	DDX41	97	62.664	Pteropus_vampyrus
FBgn0015331	abs	99	65.210	ENSPNYG00000000212	DDX41	98	65.210	Pundamilia_nyererei
FBgn0015331	abs	99	66.071	ENSPNAG00000002248	DDX41	99	66.071	Pygocentrus_nattereri
FBgn0015331	abs	96	66.332	ENSRNOG00000012771	Ddx41	96	66.392	Rattus_norvegicus
FBgn0015331	abs	96	66.164	ENSRBIG00000038465	DDX41	96	66.227	Rhinopithecus_bieti
FBgn0015331	abs	96	66.332	ENSRROG00000035750	DDX41	95	66.392	Rhinopithecus_roxellana
FBgn0015331	abs	96	65.997	ENSSBOG00000033581	DDX41	96	66.063	Saimiri_boliviensis_boliviensis
FBgn0015331	abs	99	64.887	ENSSHAG00000014005	-	99	64.887	Sarcophilus_harrisii
FBgn0015331	abs	99	63.489	ENSSHAG00000011574	-	99	63.328	Sarcophilus_harrisii
FBgn0015331	abs	98	66.502	ENSSFOG00015000404	ddx41	97	66.502	Scleropages_formosus
FBgn0015331	abs	98	65.625	ENSSMAG00000007208	DDX41	97	65.625	Scophthalmus_maximus
FBgn0015331	abs	89	67.514	ENSSLDG00000010264	DDX41	84	67.514	Seriola_lalandi_dorsalis
FBgn0015331	abs	70	65.429	ENSSARG00000003609	DDX41	69	65.429	Sorex_araneus
FBgn0015331	abs	99	66.396	ENSSPUG00000005794	DDX41	99	66.396	Sphenodon_punctatus
FBgn0015331	abs	99	65.696	ENSSPAG00000018675	DDX41	98	65.696	Stegastes_partitus
FBgn0015331	abs	96	66.499	ENSSSCG00000032642	DDX41	97	66.121	Sus_scrofa
FBgn0015331	abs	97	66.446	ENSTGUG00000000413	DDX41	99	66.446	Taeniopygia_guttata
FBgn0015331	abs	99	64.878	ENSTRUG00000004445	DDX41	99	64.878	Takifugu_rubripes
FBgn0015331	abs	91	66.491	ENSTNIG00000008991	DDX41	99	66.491	Tetraodon_nigroviridis
FBgn0015331	abs	72	75.241	ENSTBEG00000002862	DDX41	72	75.241	Tupaia_belangeri
FBgn0015331	abs	76	66.105	ENSTTRG00000015836	DDX41	95	66.392	Tursiops_truncatus
FBgn0015331	abs	97	66.501	ENSUAMG00000023036	DDX41	100	66.667	Ursus_americanus
FBgn0015331	abs	96	66.499	ENSUMAG00000024285	DDX41	97	66.121	Ursus_maritimus
FBgn0015331	abs	96	66.499	ENSVVUG00000026020	DDX41	93	65.957	Vulpes_vulpes
FBgn0015331	abs	99	65.584	ENSXETG00000033518	DDX41	99	65.584	Xenopus_tropicalis
FBgn0015331	abs	98	66.447	ENSXMAG00000009768	DDX41	97	66.447	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	18981222.	IC	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0004386	helicase activity	10908586.	ISS	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0008270	zinc ion binding	-	IEA	Function
GO:0071011	precatalytic spliceosome	18981222.	HDA	Component
GO:0071013	catalytic step 2 spliceosome	18981222.	HDA	Component