EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0015797 (Gene tree)
Gene ID: 34636
Gene Symbol: Rab6
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 1896 bases
Position: chr2L:12107221-12109116
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0079943	MMR_HSR1	PF01926.23	5.4e-05	1	1
FBpp0312096	MMR_HSR1	PF01926.23	5.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0346437	-	1896	-	FBpp0312096	208 (aa)	-	O18334
FBtr0080361	-	1830	-	FBpp0079943	208 (aa)	-	O18334

Gene Model

Click here to download FBgn0015797's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0015797's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0015797	Rab6	76	41.104	FBgn0029959	Rab39	75	41.104
FBgn0015797	Rab6	76	40.506	FBgn0014009	Rab2	74	40.506
FBgn0015797	Rab6	78	44.785	FBgn0031882	Rab30	77	43.023
FBgn0015797	Rab6	82	32.370	FBgn0015372	RabX1	66	32.370
FBgn0015797	Rab6	75	30.380	FBgn0003205	Ras85D	83	30.380
FBgn0015797	Rab6	70	36.986	FBgn0037364	Rab23	59	37.342
FBgn0015797	Rab6	78	32.143	FBgn0035155	RabX6	78	32.143
FBgn0015797	Rab6	76	44.654	FBgn0039966	Rab21	72	44.654
FBgn0015797	Rab6	94	40.816	FBgn0014010	Rab5	87	40.816
FBgn0015797	Rab6	94	36.410	FBgn0285937	Rab1	95	36.410
FBgn0015797	Rab6	76	39.241	FBgn0015791	Rab14	73	39.241
FBgn0015797	Rab6	75	36.943	FBgn0015790	Rab11	73	36.943
FBgn0015797	Rab6	94	37.313	FBgn0015795	Rab7	96	37.313
FBgn0015797	Rab6	76	42.500	FBgn0015794	Rab18	80	42.500
FBgn0015797	Rab6	77	33.333	FBgn0041191	Rheb	88	33.333
FBgn0015797	Rab6	94	39.086	FBgn0031090	Rab35	96	39.086
FBgn0015797	Rab6	96	33.796	FBgn0035255	RabX5	78	33.796

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0015797	Rab6	99	87.440	ENSG00000175582	RAB6A	98	95.000	Homo_sapiens
FBgn0015797	Rab6	99	85.854	ENSAPOG00000005731	rab6a	97	85.854	Acanthochromis_polyacanthus
FBgn0015797	Rab6	99	85.990	ENSAMEG00000017285	RAB6A	81	85.990	Ailuropoda_melanoleuca
FBgn0015797	Rab6	99	86.957	ENSACIG00000014605	rab6a	99	86.957	Amphilophus_citrinellus
FBgn0015797	Rab6	99	86.473	ENSAOCG00000012277	-	99	86.473	Amphiprion_ocellaris
FBgn0015797	Rab6	99	85.854	ENSATEG00000015992	rab41	97	85.854	Anabas_testudineus
FBgn0015797	Rab6	99	86.957	ENSATEG00000012459	-	99	86.957	Anabas_testudineus
FBgn0015797	Rab6	98	82.843	ENSACAG00000015304	-	95	82.927	Anolis_carolinensis
FBgn0015797	Rab6	99	87.440	ENSANAG00000036364	RAB6A	99	87.440	Aotus_nancymaae
FBgn0015797	Rab6	99	85.854	ENSACLG00000019423	rab41	97	85.854	Astatotilapia_calliptera
FBgn0015797	Rab6	99	88.406	ENSAMXG00000032547	rab6a	99	88.406	Astyanax_mexicanus
FBgn0015797	Rab6	78	92.593	ENSAMXG00000033216	rab41	83	92.593	Astyanax_mexicanus
FBgn0015797	Rab6	99	87.440	ENSBTAG00000000025	RAB6A	99	87.440	Bos_taurus
FBgn0015797	Rab6	99	75.845	WBGene00004269	rab-6.1	99	75.845	Caenorhabditis_elegans
FBgn0015797	Rab6	99	87.440	ENSCJAG00000039039	RAB6A	99	87.440	Callithrix_jacchus
FBgn0015797	Rab6	99	85.507	ENSCAFG00000028870	RAB6A	99	85.507	Canis_familiaris
FBgn0015797	Rab6	99	87.440	ENSCAFG00020002206	RAB6A	99	87.440	Canis_lupus_dingo
FBgn0015797	Rab6	99	87.440	ENSCHIG00000023957	RAB6A	99	87.440	Capra_hircus
FBgn0015797	Rab6	99	86.957	ENSTSYG00000013951	RAB6A	99	86.957	Carlito_syrichta
FBgn0015797	Rab6	99	87.440	ENSCATG00000012428	RAB6A	99	87.440	Cercocebus_atys
FBgn0015797	Rab6	99	87.440	ENSCLAG00000015536	RAB6A	99	87.440	Chinchilla_lanigera
FBgn0015797	Rab6	99	87.440	ENSCSAG00000004062	RAB6A	99	87.440	Chlorocebus_sabaeus
FBgn0015797	Rab6	99	76.329	ENSCHOG00000000992	RAB6A	99	76.329	Choloepus_hoffmanni
FBgn0015797	Rab6	99	87.923	ENSCPBG00000000041	RAB6A	99	87.923	Chrysemys_picta_bellii
FBgn0015797	Rab6	99	86.058	ENSCING00000002960	-	99	86.058	Ciona_intestinalis
FBgn0015797	Rab6	99	86.058	ENSCSAVG00000009128	-	99	86.058	Ciona_savignyi
FBgn0015797	Rab6	99	87.440	ENSCANG00000029094	RAB6A	99	87.440	Colobus_angolensis_palliatus
FBgn0015797	Rab6	99	87.440	ENSCGRG00001018153	Rab6a	99	87.440	Cricetulus_griseus_chok1gshd
FBgn0015797	Rab6	99	85.854	ENSCSEG00000004941	rab41	97	85.854	Cynoglossus_semilaevis
FBgn0015797	Rab6	99	85.854	ENSCVAG00000001618	rab41	97	85.854	Cyprinodon_variegatus
FBgn0015797	Rab6	99	86.473	ENSCVAG00000022249	rab6a	99	86.473	Cyprinodon_variegatus
FBgn0015797	Rab6	99	85.854	ENSDARG00000029885	rab41	97	85.854	Danio_rerio
FBgn0015797	Rab6	99	87.923	ENSDARG00000103714	rab6a	99	87.923	Danio_rerio
FBgn0015797	Rab6	99	87.440	ENSDNOG00000042746	RAB6A	99	87.440	Dasypus_novemcinctus
FBgn0015797	Rab6	99	87.440	ENSDORG00000027784	Rab6a	99	87.440	Dipodomys_ordii
FBgn0015797	Rab6	63	95.420	ENSETEG00000009412	-	63	95.420	Echinops_telfairi
FBgn0015797	Rab6	99	87.440	ENSEASG00005017944	RAB6A	99	87.440	Equus_asinus_asinus
FBgn0015797	Rab6	99	87.440	ENSECAG00000022694	-	99	87.440	Equus_caballus
FBgn0015797	Rab6	99	85.990	ENSELUG00000008876	rab6a	99	85.990	Esox_lucius
FBgn0015797	Rab6	99	87.440	ENSFCAG00000023834	RAB6A	99	87.440	Felis_catus
FBgn0015797	Rab6	99	86.957	ENSFALG00000008011	RAB6A	99	86.957	Ficedula_albicollis
FBgn0015797	Rab6	99	87.440	ENSFDAG00000010948	-	99	87.440	Fukomys_damarensis
FBgn0015797	Rab6	99	84.390	ENSGMOG00000004095	rab41	97	84.390	Gadus_morhua
FBgn0015797	Rab6	99	86.473	ENSGALG00000026278	-	98	86.473	Gallus_gallus
FBgn0015797	Rab6	99	86.473	ENSGALG00000017320	RAB6A	99	86.473	Gallus_gallus
FBgn0015797	Rab6	99	85.854	ENSGAFG00000019872	rab41	97	85.854	Gambusia_affinis
FBgn0015797	Rab6	99	86.473	ENSGAFG00000006356	rab6a	99	86.473	Gambusia_affinis
FBgn0015797	Rab6	99	86.957	ENSGACG00000020356	rab6a	99	86.957	Gasterosteus_aculeatus
FBgn0015797	Rab6	99	85.854	ENSGACG00000017153	rab41	97	85.854	Gasterosteus_aculeatus
FBgn0015797	Rab6	99	87.923	ENSGAGG00000021701	RAB6A	99	87.923	Gopherus_agassizii
FBgn0015797	Rab6	99	87.440	ENSGGOG00000010610	RAB6A	99	87.440	Gorilla_gorilla
FBgn0015797	Rab6	99	86.957	ENSHBUG00000000890	rab6a	99	86.957	Haplochromis_burtoni
FBgn0015797	Rab6	99	87.440	ENSHGLG00000008829	-	99	87.440	Heterocephalus_glaber_female
FBgn0015797	Rab6	99	86.473	ENSHGLG00100014550	-	99	86.473	Heterocephalus_glaber_male
FBgn0015797	Rab6	99	86.957	ENSHCOG00000006550	-	99	86.957	Hippocampus_comes
FBgn0015797	Rab6	99	85.854	ENSHCOG00000004404	rab41	97	85.854	Hippocampus_comes
FBgn0015797	Rab6	99	85.366	ENSIPUG00000019382	rab41	97	85.366	Ictalurus_punctatus
FBgn0015797	Rab6	99	87.923	ENSIPUG00000021740	rab6a	99	87.923	Ictalurus_punctatus
FBgn0015797	Rab6	99	87.440	ENSSTOG00000023497	RAB6A	99	87.440	Ictidomys_tridecemlineatus
FBgn0015797	Rab6	79	93.902	ENSKMAG00000013146	-	85	93.902	Kryptolebias_marmoratus
FBgn0015797	Rab6	99	85.507	ENSLBEG00000003748	rab6a	99	85.507	Labrus_bergylta
FBgn0015797	Rab6	99	86.829	ENSLACG00000013980	rab41	97	86.829	Latimeria_chalumnae
FBgn0015797	Rab6	99	83.575	ENSLACG00000005168	RAB6A	99	83.575	Latimeria_chalumnae
FBgn0015797	Rab6	99	84.878	ENSLOCG00000015191	rab41	97	84.878	Lepisosteus_oculatus
FBgn0015797	Rab6	99	87.440	ENSMFAG00000041027	RAB6A	99	87.440	Macaca_fascicularis
FBgn0015797	Rab6	99	87.440	ENSMNEG00000029216	RAB6A	99	87.440	Macaca_nemestrina
FBgn0015797	Rab6	99	87.440	ENSMLEG00000038771	RAB6A	99	87.440	Mandrillus_leucophaeus
FBgn0015797	Rab6	99	84.390	ENSMAMG00000020859	rab41	97	84.390	Mastacembelus_armatus
FBgn0015797	Rab6	99	86.957	ENSMAMG00000012488	rab6a	99	86.957	Mastacembelus_armatus
FBgn0015797	Rab6	99	86.957	ENSMZEG00005023181	rab6a	99	86.957	Maylandia_zebra
FBgn0015797	Rab6	99	87.440	ENSMICG00000031565	RAB6A	99	87.440	Microcebus_murinus
FBgn0015797	Rab6	99	87.440	ENSMOCG00000014387	Rab6a	99	87.440	Microtus_ochrogaster
FBgn0015797	Rab6	99	83.092	ENSMMOG00000016209	rab6a	99	83.092	Mola_mola
FBgn0015797	Rab6	88	92.350	ENSMMOG00000001992	rab41	83	92.350	Mola_mola
FBgn0015797	Rab6	99	87.923	ENSMODG00000007600	RAB6A	99	87.923	Monodelphis_domestica
FBgn0015797	Rab6	99	85.854	ENSMALG00000010549	rab41	97	85.854	Monopterus_albus
FBgn0015797	Rab6	99	86.473	ENSMALG00000020364	-	99	86.473	Monopterus_albus
FBgn0015797	Rab6	99	87.440	MGP_CAROLIEiJ_G0030051	Rab6a	99	87.440	Mus_caroli
FBgn0015797	Rab6	99	87.440	ENSMUSG00000030704	Rab6a	99	87.440	Mus_musculus
FBgn0015797	Rab6	99	87.440	MGP_PahariEiJ_G0013273	Rab6a	99	87.440	Mus_pahari
FBgn0015797	Rab6	99	87.440	MGP_SPRETEiJ_G0031162	Rab6a	99	87.440	Mus_spretus
FBgn0015797	Rab6	99	87.440	ENSMPUG00000009724	RAB6A	99	87.440	Mustela_putorius_furo
FBgn0015797	Rab6	99	87.440	ENSNGAG00000014566	Rab6a	99	87.440	Nannospalax_galili
FBgn0015797	Rab6	99	85.854	ENSNBRG00000022702	rab41	97	85.854	Neolamprologus_brichardi
FBgn0015797	Rab6	99	86.957	ENSNBRG00000016716	rab6a	99	86.957	Neolamprologus_brichardi
FBgn0015797	Rab6	99	87.440	ENSNLEG00000017098	RAB6A	99	87.440	Nomascus_leucogenys
FBgn0015797	Rab6	99	87.923	ENSMEUG00000010026	RAB6A	99	87.923	Notamacropus_eugenii
FBgn0015797	Rab6	89	91.398	ENSOPRG00000010355	RAB6A	98	91.398	Ochotona_princeps
FBgn0015797	Rab6	99	87.440	ENSODEG00000005942	RAB6A	99	87.440	Octodon_degus
FBgn0015797	Rab6	99	86.957	ENSONIG00000004394	rab6a	99	86.957	Oreochromis_niloticus
FBgn0015797	Rab6	99	85.990	ENSOCUG00000009297	RAB6A	99	85.990	Oryctolagus_cuniculus
FBgn0015797	Rab6	99	81.221	ENSORLG00000000937	-	99	81.221	Oryzias_latipes
FBgn0015797	Rab6	99	85.922	ENSORLG00000026197	rab6a	99	85.922	Oryzias_latipes
FBgn0015797	Rab6	99	85.922	ENSORLG00020001816	rab6a	99	85.922	Oryzias_latipes_hni
FBgn0015797	Rab6	99	83.902	ENSORLG00020000604	rab41	97	83.902	Oryzias_latipes_hni
FBgn0015797	Rab6	99	85.922	ENSORLG00015006162	rab6a	99	85.922	Oryzias_latipes_hsok
FBgn0015797	Rab6	99	85.922	ENSOMEG00000004379	-	99	85.922	Oryzias_melastigma
FBgn0015797	Rab6	99	85.990	ENSOGAG00000027043	RAB6A	99	85.990	Otolemur_garnettii
FBgn0015797	Rab6	99	87.440	ENSOARG00000007994	RAB6A	99	87.440	Ovis_aries
FBgn0015797	Rab6	99	87.440	ENSPPAG00000011436	RAB6A	99	87.440	Pan_paniscus
FBgn0015797	Rab6	99	87.440	ENSPPRG00000009543	RAB6A	99	87.440	Panthera_pardus
FBgn0015797	Rab6	99	87.440	ENSPTRG00000044137	RAB6A	99	87.440	Pan_troglodytes
FBgn0015797	Rab6	99	87.440	ENSPANG00000014356	RAB6A	99	87.440	Papio_anubis
FBgn0015797	Rab6	100	83.654	ENSPKIG00000018584	rab41	98	83.654	Paramormyrops_kingsleyae
FBgn0015797	Rab6	99	85.990	ENSPMGG00000010067	-	99	85.990	Periophthalmus_magnuspinnatus
FBgn0015797	Rab6	99	86.473	ENSPFOG00000019509	rab6a	99	86.473	Poecilia_formosa
FBgn0015797	Rab6	99	86.473	ENSPLAG00000019570	rab6a	99	86.473	Poecilia_latipinna
FBgn0015797	Rab6	99	85.854	ENSPLAG00000000376	rab41	97	85.854	Poecilia_latipinna
FBgn0015797	Rab6	99	86.473	ENSPMEG00000003369	rab6a	99	86.473	Poecilia_mexicana
FBgn0015797	Rab6	99	85.854	ENSPMEG00000014170	rab41	97	85.854	Poecilia_mexicana
FBgn0015797	Rab6	99	86.473	ENSPREG00000021505	rab6a	99	86.473	Poecilia_reticulata
FBgn0015797	Rab6	99	87.440	ENSPPYG00000003663	RAB6A	99	87.440	Pongo_abelii
FBgn0015797	Rab6	89	92.973	ENSPCAG00000006752	RAB6A	99	92.973	Procavia_capensis
FBgn0015797	Rab6	99	87.440	ENSPCOG00000021991	RAB6A	99	87.440	Propithecus_coquereli
FBgn0015797	Rab6	99	87.440	ENSPVAG00000017342	RAB6A	99	87.440	Pteropus_vampyrus
FBgn0015797	Rab6	99	86.957	ENSPNYG00000020556	rab6a	99	86.957	Pundamilia_nyererei
FBgn0015797	Rab6	99	85.854	ENSPNYG00000013288	rab41	97	85.854	Pundamilia_nyererei
FBgn0015797	Rab6	99	85.854	ENSPNAG00000021737	rab41	97	85.854	Pygocentrus_nattereri
FBgn0015797	Rab6	99	87.440	ENSRNOG00000018176	Rab6a	99	87.440	Rattus_norvegicus
FBgn0015797	Rab6	99	87.440	ENSRBIG00000030390	RAB6A	99	87.440	Rhinopithecus_bieti
FBgn0015797	Rab6	99	87.440	ENSRROG00000042103	RAB6A	99	87.440	Rhinopithecus_roxellana
FBgn0015797	Rab6	99	72.464	ENSSBOG00000028389	RAB6A	99	72.464	Saimiri_boliviensis_boliviensis
FBgn0015797	Rab6	99	85.990	ENSSFOG00015002077	rab6a	99	85.990	Scleropages_formosus
FBgn0015797	Rab6	98	84.314	ENSSFOG00015004941	rab41	95	84.390	Scleropages_formosus
FBgn0015797	Rab6	99	85.854	ENSSMAG00000015774	rab41	97	85.854	Scophthalmus_maximus
FBgn0015797	Rab6	99	84.058	ENSSMAG00000017205	-	99	84.058	Scophthalmus_maximus
FBgn0015797	Rab6	99	86.957	ENSSDUG00000013496	-	99	86.957	Seriola_dumerili
FBgn0015797	Rab6	99	84.390	ENSSLDG00000022282	rab41	97	84.390	Seriola_lalandi_dorsalis
FBgn0015797	Rab6	99	86.957	ENSSLDG00000015289	-	99	86.957	Seriola_lalandi_dorsalis
FBgn0015797	Rab6	99	87.923	ENSSPUG00000017301	RAB6A	99	87.923	Sphenodon_punctatus
FBgn0015797	Rab6	99	85.990	ENSSPUG00000001533	-	98	85.990	Sphenodon_punctatus
FBgn0015797	Rab6	99	85.990	ENSSPAG00000001067	-	99	85.990	Stegastes_partitus
FBgn0015797	Rab6	99	84.390	ENSSPAG00000006001	rab41	97	84.390	Stegastes_partitus
FBgn0015797	Rab6	99	87.440	ENSSSCG00000014828	RAB6A	99	87.440	Sus_scrofa
FBgn0015797	Rab6	99	88.406	ENSTGUG00000013470	RAB6A	99	88.406	Taeniopygia_guttata
FBgn0015797	Rab6	99	86.473	ENSTRUG00000023252	rab6a	99	86.473	Takifugu_rubripes
FBgn0015797	Rab6	99	85.854	ENSTRUG00000009223	rab41	97	85.854	Takifugu_rubripes
FBgn0015797	Rab6	99	86.957	ENSTTRG00000005374	RAB6A	99	86.957	Tursiops_truncatus
FBgn0015797	Rab6	99	82.609	ENSUMAG00000010248	RAB6A	89	93.293	Ursus_maritimus
FBgn0015797	Rab6	99	87.440	ENSVVUG00000024550	RAB6A	99	87.440	Vulpes_vulpes
FBgn0015797	Rab6	89	91.892	ENSXETG00000023200	rab6a	98	91.892	Xenopus_tropicalis
FBgn0015797	Rab6	99	74.879	ENSXETG00000031363	-	99	74.879	Xenopus_tropicalis
FBgn0015797	Rab6	99	86.473	ENSXCOG00000006259	rab6a	99	86.473	Xiphophorus_couchianus
FBgn0015797	Rab6	99	86.473	ENSXMAG00000011903	rab6a	99	86.473	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001745	compound eye morphogenesis	8913755.	IGI	Process
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0003924	GTPase activity	21795785.	IDA	Function
GO:0003924	GTPase activity	14579253.	ISS	Function
GO:0005515	protein binding	17329360.19001129.21835342.25453831.	IPI	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005794	Golgi apparatus	21873635.	IBA	Component
GO:0005794	Golgi apparatus	21835342.	IDA	Component
GO:0006886	intracellular protein transport	21873635.	IBA	Process
GO:0006887	exocytosis	17329360.	IMP	Process
GO:0006890	retrograde vesicle-mediated transport, Golgi to ER	21873635.	IBA	Process
GO:0006891	intra-Golgi vesicle-mediated transport	21873635.	IBA	Process
GO:0007293	germarium-derived egg chamber formation	17329360.	IMP	Process
GO:0007411	axon guidance	21835342.	IMP	Process
GO:0007602	phototransduction	26659849.	IMP	Process
GO:0008103	oocyte microtubule cytoskeleton polarization	17329360.	IMP	Process
GO:0016192	vesicle-mediated transport	-	ISS	Process
GO:0031410	cytoplasmic vesicle	21835342.	IDA	Component
GO:0031982	vesicle	-	ISS	Component
GO:0032482	Rab protein signal transduction	21873635.	IBA	Process
GO:0032482	Rab protein signal transduction	-	ISS	Process
GO:0042147	retrograde transport, endosome to Golgi	21873635.	IBA	Process
GO:0043025	neuronal cell body	22000105.	HDA	Component
GO:0045202	synapse	22000105.	HDA	Component
GO:0045451	pole plasm oskar mRNA localization	17329360.	IMP	Process
GO:0045467	R7 cell development	21835342.	IMP	Process
GO:0050832	defense response to fungus	18833296.	IMP	Process
GO:0060078	regulation of postsynaptic membrane potential	21835342.	IMP	Process