EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0015818 (Gene tree)
Gene ID: 31558
Gene Symbol: Spx
Alias: -
Full Name: Spliceosomal protein on the X
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 1775 bases
Position: chrX:6255822-6257596
Accession: FBgn0015818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0070859	RRM_1	PF00076.22	1.5e-34	1	2
FBpp0070859	RRM_1	PF00076.22	1.5e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0070894	-	1643	-	FBpp0070859	347 (aa)	-	Q24534

Gene Model

Click here to download FBgn0015818's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0015818's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0015818	Spx	57	37.195	FBgn0265297	pAbp	58	34.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0015818	Spx	61	87.324	ENSACIG00000018455	sf3b4	65	85.520	Amphilophus_citrinellus
FBgn0015818	Spx	62	88.318	ENSACAG00000010019	SF3B4	56	70.652	Anolis_carolinensis
FBgn0015818	Spx	70	72.000	WBGene00004723	sap-49	56	79.167	Caenorhabditis_elegans
FBgn0015818	Spx	58	66.000	ENSCHIG00000006654	-	50	66.000	Capra_hircus
FBgn0015818	Spx	61	87.204	ENSCCAG00000021751	-	50	85.520	Cebus_capucinus
FBgn0015818	Spx	63	82.488	ENSCING00000002337	-	62	80.349	Ciona_intestinalis
FBgn0015818	Spx	61	84.028	ENSCSAVG00000007809	-	90	84.615	Ciona_savignyi
FBgn0015818	Spx	61	88.152	ENSCGRG00001003590	Sf3b4	52	86.425	Cricetulus_griseus_chok1gshd
FBgn0015818	Spx	61	88.152	ENSCGRG00000016914	Sf3b4	52	86.425	Cricetulus_griseus_crigri
FBgn0015818	Spx	62	88.372	ENSCVAG00000005536	sf3b4	57	86.425	Cyprinodon_variegatus
FBgn0015818	Spx	62	88.318	ENSDARG00000018574	sf3b4	55	86.878	Danio_rerio
FBgn0015818	Spx	61	79.147	ENSETEG00000008963	SF3B4	52	77.828	Echinops_telfairi
FBgn0015818	Spx	54	85.638	ENSEBUG00000011194	-	53	85.638	Eptatretus_burgeri
FBgn0015818	Spx	61	88.152	ENSELUG00000012876	sf3b4	55	86.425	Esox_lucius
FBgn0015818	Spx	80	72.760	ENSGMOG00000002519	sf3b4	65	86.425	Gadus_morhua
FBgn0015818	Spx	62	88.318	ENSGALG00000013352	SF3B4	53	86.425	Gallus_gallus
FBgn0015818	Spx	62	78.037	ENSGGOG00000038845	-	55	78.037	Gorilla_gorilla
FBgn0015818	Spx	61	88.263	ENSHCOG00000003014	sf3b4	73	66.212	Hippocampus_comes
FBgn0015818	Spx	60	61.345	ENSJJAG00000022500	Sf3b4	51	62.016	Jaculus_jaculus
FBgn0015818	Spx	61	88.152	ENSLOCG00000009048	sf3b4	52	86.425	Lepisosteus_oculatus
FBgn0015818	Spx	62	88.318	ENSMGAG00000000653	SF3B4	53	86.425	Meleagris_gallopavo
FBgn0015818	Spx	61	88.152	ENSMAUG00000015266	Sf3b4	52	86.425	Mesocricetus_auratus
FBgn0015818	Spx	61	88.263	ENSMALG00000006174	sf3b4	74	68.227	Monopterus_albus
FBgn0015818	Spx	61	88.152	MGP_CAROLIEiJ_G0025365	Sf3b4	52	86.425	Mus_caroli
FBgn0015818	Spx	61	88.152	ENSMUSG00000068856	Sf3b4	52	86.425	Mus_musculus
FBgn0015818	Spx	61	88.152	MGP_PahariEiJ_G0026809	Sf3b4	52	86.425	Mus_pahari
FBgn0015818	Spx	61	88.152	MGP_SPRETEiJ_G0026309	Sf3b4	52	86.425	Mus_spretus
FBgn0015818	Spx	61	88.152	ENSNGAG00000016337	Sf3b4	52	86.425	Nannospalax_galili
FBgn0015818	Spx	61	83.886	ENSOPRG00000010808	SF3B4	52	82.353	Ochotona_princeps
FBgn0015818	Spx	62	66.977	ENSODEG00000008916	-	54	66.977	Octodon_degus
FBgn0015818	Spx	62	73.148	ENSODEG00000003597	-	53	73.148	Octodon_degus
FBgn0015818	Spx	61	74.074	ENSOANG00000004768	-	50	74.074	Ornithorhynchus_anatinus
FBgn0015818	Spx	62	88.318	ENSORLG00000003062	sf3b4	57	86.425	Oryzias_latipes
FBgn0015818	Spx	61	77.465	ENSPPAG00000030024	-	54	76.018	Pan_paniscus
FBgn0015818	Spx	61	88.152	ENSPEMG00000017568	Sf3b4	52	86.425	Peromyscus_maniculatus_bairdii
FBgn0015818	Spx	61	88.152	ENSPCIG00000008765	SF3B4	52	86.425	Phascolarctos_cinereus
FBgn0015818	Spx	61	88.263	ENSPFOG00000005754	sf3b4	76	68.667	Poecilia_formosa
FBgn0015818	Spx	60	84.615	ENSPCAG00000000392	SF3B4	50	84.615	Procavia_capensis
FBgn0015818	Spx	61	88.152	ENSRNOG00000021181	Sf3b4	52	86.425	Rattus_norvegicus
FBgn0015818	Spx	53	35.859	YOR319W	-	91	36.410	Saccharomyces_cerevisiae
FBgn0015818	Spx	62	88.318	ENSSPUG00000001028	SF3B4	55	86.425	Sphenodon_punctatus
FBgn0015818	Spx	61	88.152	ENSSSCG00000006665	-	52	86.425	Sus_scrofa
FBgn0015818	Spx	62	56.744	ENSSSCG00000039440	-	53	55.656	Sus_scrofa
FBgn0015818	Spx	61	88.152	ENSTGUG00000004470	SF3B4	87	86.425	Taeniopygia_guttata
FBgn0015818	Spx	61	88.152	ENSVVUG00000007732	-	57	86.425	Vulpes_vulpes
FBgn0015818	Spx	60	86.603	ENSXETG00000011038	sf3b4	56	86.190	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0000398	mRNA splicing, via spliceosome	18981222.	IC	Process
GO:0000398	mRNA splicing, via spliceosome	9729422.10908584.	ISS	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003729	mRNA binding	10908586.	ISS	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005686	U2 snRNP	21873635.	IBA	Component
GO:0005686	U2 snRNP	10908584.	ISS	Component
GO:0071011	precatalytic spliceosome	18981222.	HDA	Component
GO:1990904	ribonucleoprotein complex	21873635.	IBA	Component