EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0016726 (Gene tree)
Gene ID: 37430
Gene Symbol: RpL29
Alias: -
Full Name: Ribosomal protein L29
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 637 bases
Position: chr2R:21293768-21294404
Accession: FBgn0016726
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0071518	Ribosomal_L29e	PF01779.17	4.1e-20	1	1
FBpp0071519	Ribosomal_L29e	PF01779.17	4.1e-20	1	1
FBpp0296949	Ribosomal_L29e	PF01779.17	4.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0071593	-	389	-	FBpp0071519	76 (aa)	-	Q24154
FBtr0071592	-	329	-	FBpp0071518	76 (aa)	-	Q24154
FBtr0305669	-	304	-	FBpp0296949	76 (aa)	-	Q24154

Gene Model

Click here to download FBgn0016726's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0016726's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0016726	RpL29	61	65.217	ENSG00000162244	RPL29	100	64.865	Homo_sapiens
FBgn0016726	RpL29	66	66.000	ENSAPOG00000002586	rpl29	78	66.000	Acanthochromis_polyacanthus
FBgn0016726	RpL29	66	64.000	ENSACIG00000018340	rpl29	78	64.000	Amphilophus_citrinellus
FBgn0016726	RpL29	66	66.000	ENSAOCG00000016652	rpl29	78	66.000	Amphiprion_ocellaris
FBgn0016726	RpL29	66	66.000	ENSAPEG00000005754	rpl29	78	66.000	Amphiprion_percula
FBgn0016726	RpL29	61	65.217	ENSACAG00000006888	RPL29	77	64.000	Anolis_carolinensis
FBgn0016726	RpL29	61	65.217	ENSANAG00000024147	-	77	60.870	Aotus_nancymaae
FBgn0016726	RpL29	66	64.000	ENSACLG00000017820	rpl29	78	64.000	Astatotilapia_calliptera
FBgn0016726	RpL29	66	64.000	ENSAMXG00000038794	rpl29	94	53.968	Astyanax_mexicanus
FBgn0016726	RpL29	66	64.000	WBGene00004443	rpl-29	81	64.000	Caenorhabditis_elegans
FBgn0016726	RpL29	61	65.217	ENSCJAG00000042339	-	77	60.870	Callithrix_jacchus
FBgn0016726	RpL29	96	47.368	ENSCHIG00000008135	-	51	47.368	Capra_hircus
FBgn0016726	RpL29	61	65.217	ENSCCAG00000027980	-	77	60.870	Cebus_capucinus
FBgn0016726	RpL29	54	58.537	ENSCPBG00000016679	-	53	58.537	Chrysemys_picta_bellii
FBgn0016726	RpL29	66	58.000	ENSCING00000018496	-	86	58.000	Ciona_intestinalis
FBgn0016726	RpL29	66	62.000	ENSCSAVG00000005231	-	85	62.000	Ciona_savignyi
FBgn0016726	RpL29	61	65.217	ENSCGRG00001016452	-	74	64.000	Cricetulus_griseus_chok1gshd
FBgn0016726	RpL29	66	66.000	ENSCSEG00000010267	rpl29	76	66.000	Cynoglossus_semilaevis
FBgn0016726	RpL29	66	64.000	ENSCVAG00000023098	rpl29	78	64.000	Cyprinodon_variegatus
FBgn0016726	RpL29	78	55.932	ENSDARG00000077717	rpl29	92	55.932	Danio_rerio
FBgn0016726	RpL29	55	64.286	ENSEASG00005005507	-	65	64.286	Equus_asinus_asinus
FBgn0016726	RpL29	75	57.895	ENSELUG00000015592	RL29	99	50.725	Esox_lucius
FBgn0016726	RpL29	53	60.000	ENSFCAG00000035470	-	53	60.000	Felis_catus
FBgn0016726	RpL29	63	54.167	ENSFCAG00000043006	-	59	54.167	Felis_catus
FBgn0016726	RpL29	89	51.471	ENSFALG00000008925	RPL29	100	51.471	Ficedula_albicollis
FBgn0016726	RpL29	87	46.970	ENSFDAG00000003847	-	53	46.970	Fukomys_damarensis
FBgn0016726	RpL29	66	64.000	ENSFHEG00000015425	rpl29	78	64.000	Fundulus_heteroclitus
FBgn0016726	RpL29	66	64.000	ENSGMOG00000003626	rpl29	66	64.000	Gadus_morhua
FBgn0016726	RpL29	61	65.217	ENSGALG00000026978	RPL29	70	64.000	Gallus_gallus
FBgn0016726	RpL29	66	64.000	ENSGAFG00000012868	rpl29	78	64.000	Gambusia_affinis
FBgn0016726	RpL29	66	64.000	ENSGACG00000007041	rpl29	65	64.000	Gasterosteus_aculeatus
FBgn0016726	RpL29	71	51.852	ENSGAGG00000024203	-	98	51.852	Gopherus_agassizii
FBgn0016726	RpL29	61	65.217	ENSGGOG00000024691	RPL29	77	58.696	Gorilla_gorilla
FBgn0016726	RpL29	66	64.000	ENSHBUG00000010519	rpl29	78	64.000	Haplochromis_burtoni
FBgn0016726	RpL29	66	66.000	ENSHCOG00000000478	rpl29	64	66.000	Hippocampus_comes
FBgn0016726	RpL29	66	64.000	ENSIPUG00000001196	rpl29	78	64.000	Ictalurus_punctatus
FBgn0016726	RpL29	66	64.000	ENSKMAG00000011291	rpl29	78	64.000	Kryptolebias_marmoratus
FBgn0016726	RpL29	66	64.000	ENSLBEG00000016213	rpl29	100	50.704	Labrus_bergylta
FBgn0016726	RpL29	66	68.000	ENSLACG00000018031	-	74	68.000	Latimeria_chalumnae
FBgn0016726	RpL29	66	68.000	ENSLACG00000018622	rpl29	78	68.000	Latimeria_chalumnae
FBgn0016726	RpL29	61	63.043	ENSLOCG00000013798	rpl29	77	62.000	Lepisosteus_oculatus
FBgn0016726	RpL29	66	66.000	ENSMAMG00000014274	rpl29	53	66.000	Mastacembelus_armatus
FBgn0016726	RpL29	66	64.000	ENSMZEG00005013519	rpl29	78	64.000	Maylandia_zebra
FBgn0016726	RpL29	61	65.217	ENSMGAG00000001213	RPL29	70	64.000	Meleagris_gallopavo
FBgn0016726	RpL29	59	62.222	ENSMICG00000049466	-	68	62.222	Microcebus_murinus
FBgn0016726	RpL29	66	66.000	ENSMMOG00000010430	rpl29	78	66.000	Mola_mola
FBgn0016726	RpL29	66	66.000	ENSMALG00000009023	rpl29	64	66.000	Monopterus_albus
FBgn0016726	RpL29	61	65.217	ENSMUSG00000048758	Rpl29	74	64.000	Mus_musculus
FBgn0016726	RpL29	66	64.000	ENSNBRG00000022109	rpl29	78	64.000	Neolamprologus_brichardi
FBgn0016726	RpL29	66	64.000	ENSONIG00000014377	rpl29	79	64.000	Oreochromis_niloticus
FBgn0016726	RpL29	66	66.000	ENSORLG00000023610	rpl29	53	66.000	Oryzias_latipes
FBgn0016726	RpL29	66	66.000	ENSORLG00020018665	rpl29	53	66.000	Oryzias_latipes_hni
FBgn0016726	RpL29	66	66.000	ENSORLG00015014455	rpl29	53	66.000	Oryzias_latipes_hsok
FBgn0016726	RpL29	66	66.000	ENSOMEG00000019919	rpl29	78	66.000	Oryzias_melastigma
FBgn0016726	RpL29	53	58.696	ENSPPAG00000037142	-	78	58.696	Pan_paniscus
FBgn0016726	RpL29	99	41.333	ENSPPRG00000011689	-	93	41.333	Panthera_pardus
FBgn0016726	RpL29	63	54.167	ENSPTIG00000011913	-	59	54.167	Panthera_tigris_altaica
FBgn0016726	RpL29	61	65.217	ENSPTRG00000043237	RPL29	78	58.696	Pan_troglodytes
FBgn0016726	RpL29	61	67.391	ENSPKIG00000025048	rpl29	76	66.000	Paramormyrops_kingsleyae
FBgn0016726	RpL29	61	65.217	ENSPSIG00000014699	RPL29	79	64.000	Pelodiscus_sinensis
FBgn0016726	RpL29	66	64.000	ENSPMGG00000005361	rpl29	74	64.000	Periophthalmus_magnuspinnatus
FBgn0016726	RpL29	66	64.000	ENSPFOG00000011385	rpl29	82	64.000	Poecilia_formosa
FBgn0016726	RpL29	66	62.000	ENSPLAG00000012042	rpl29	78	62.000	Poecilia_latipinna
FBgn0016726	RpL29	66	64.000	ENSPMEG00000018297	rpl29	78	64.000	Poecilia_mexicana
FBgn0016726	RpL29	66	64.000	ENSPREG00000007066	rpl29	78	64.000	Poecilia_reticulata
FBgn0016726	RpL29	66	64.000	ENSPNYG00000019481	rpl29	78	64.000	Pundamilia_nyererei
FBgn0016726	RpL29	66	64.000	ENSPNAG00000007550	rpl29	78	64.000	Pygocentrus_nattereri
FBgn0016726	RpL29	66	58.000	ENSRNOG00000025794	AABR07021239.1	67	58.000	Rattus_norvegicus
FBgn0016726	RpL29	64	57.143	YFR032C-A	RPL29	100	49.153	Saccharomyces_cerevisiae
FBgn0016726	RpL29	68	65.385	ENSSMAG00000013571	rpl29	81	65.385	Scophthalmus_maximus
FBgn0016726	RpL29	66	66.000	ENSSDUG00000016140	rpl29	78	66.000	Seriola_dumerili
FBgn0016726	RpL29	66	66.000	ENSSLDG00000003932	rpl29	78	66.000	Seriola_lalandi_dorsalis
FBgn0016726	RpL29	61	65.217	ENSSPUG00000003760	RPL29	79	64.000	Sphenodon_punctatus
FBgn0016726	RpL29	66	68.000	ENSSPAG00000020292	rpl29	78	68.000	Stegastes_partitus
FBgn0016726	RpL29	62	48.936	ENSSSCG00000031314	-	74	48.936	Sus_scrofa
FBgn0016726	RpL29	61	65.217	ENSTGUG00000006027	RPL29	79	64.000	Taeniopygia_guttata
FBgn0016726	RpL29	78	57.627	ENSTRUG00000022273	rpl29	91	57.627	Takifugu_rubripes
FBgn0016726	RpL29	66	68.000	ENSTNIG00000014816	rpl29	74	68.000	Tetraodon_nigroviridis
FBgn0016726	RpL29	66	58.000	ENSTBEG00000000807	-	60	58.000	Tupaia_belangeri
FBgn0016726	RpL29	59	64.444	ENSUAMG00000002601	-	79	64.444	Ursus_americanus
FBgn0016726	RpL29	61	65.217	ENSVVUG00000012400	-	88	64.000	Vulpes_vulpes
FBgn0016726	RpL29	61	65.217	ENSXETG00000010811	rpl29	67	64.000	Xenopus_tropicalis
FBgn0016726	RpL29	66	64.000	ENSXCOG00000013543	rpl29	78	64.000	Xiphophorus_couchianus
FBgn0016726	RpL29	66	64.000	ENSXMAG00000020948	rpl29	78	64.000	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002181	cytoplasmic translation	21873635.	IBA	Process
GO:0002181	cytoplasmic translation	17927810.	TAS	Process
GO:0003682	chromatin binding	16816001.	IGI	Function
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	17927810.	TAS	Function
GO:0022625	cytosolic large ribosomal subunit	21873635.	IBA	Component
GO:0022625	cytosolic large ribosomal subunit	17927810.	TAS	Component