EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0019938 (Gene tree)
Gene ID: 36617
Gene Symbol: RpI1
Alias: -
Full Name: RNA polymerase I subunit
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 5606 bases
Position: chr2R:14595611-14601216
Accession: FBgn0019938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0086640	RNA_pol_Rpb1_5	PF04998.17	1.4e-94	1	1
FBpp0086640	RNA_pol_Rpb1_4	PF05000.17	1.5e-23	1	1
FBpp0086640	RNA_pol_Rpb1_2	PF00623.20	4.3e-72	1	1
FBpp0086640	RNA_pol_Rpb1_3	PF04983.18	9.7e-35	1	1
FBpp0086640	RNA_pol_Rpb1_1	PF04997.12	6.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0087511	-	5078	-	FBpp0086640	1642 (aa)	-	P91875

Gene Model

Click here to download FBgn0019938's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0019938's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0019938	RpI1	64	46.667	FBgn0003277	RpII215	54	46.667
FBgn0019938	RpI1	74	31.122	FBgn0030687	CG17209	76	37.190

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0019938	RpI1	99	43.442	ENSG00000068654	POLR1A	83	44.118	Homo_sapiens
FBgn0019938	RpI1	70	43.814	ENSAPOG00000017945	polr1a	99	44.501	Acanthochromis_polyacanthus
FBgn0019938	RpI1	99	43.935	ENSAMEG00000005807	POLR1A	99	43.967	Ailuropoda_melanoleuca
FBgn0019938	RpI1	99	43.371	ENSACIG00000022147	polr1a	79	44.065	Amphilophus_citrinellus
FBgn0019938	RpI1	99	42.544	ENSATEG00000016773	polr1a	79	43.964	Anabas_testudineus
FBgn0019938	RpI1	84	46.617	ENSAPLG00000013871	POLR1A	75	48.831	Anas_platyrhynchos
FBgn0019938	RpI1	99	43.275	ENSACAG00000012141	POLR1A	79	44.876	Anolis_carolinensis
FBgn0019938	RpI1	99	42.806	ENSACLG00000020541	polr1a	90	49.524	Astatotilapia_calliptera
FBgn0019938	RpI1	99	39.200	WBGene00012999	rpoa-1	78	55.914	Caenorhabditis_elegans
FBgn0019938	RpI1	99	43.709	ENSCAFG00020014752	POLR1A	99	43.481	Canis_lupus_dingo
FBgn0019938	RpI1	99	43.333	ENSCHIG00000018204	POLR1A	87	44.883	Capra_hircus
FBgn0019938	RpI1	99	42.949	ENSTSYG00000002761	POLR1A	80	44.006	Carlito_syrichta
FBgn0019938	RpI1	97	43.174	ENSCAPG00000010132	POLR1A	92	50.909	Cavia_aperea
FBgn0019938	RpI1	99	43.918	ENSCPOG00000012350	POLR1A	79	45.275	Cavia_porcellus
FBgn0019938	RpI1	99	43.180	ENSCATG00000029786	POLR1A	80	44.341	Cercocebus_atys
FBgn0019938	RpI1	99	43.314	ENSCLAG00000005187	POLR1A	80	44.000	Chinchilla_lanigera
FBgn0019938	RpI1	99	42.890	ENSCSAG00000016251	POLR1A	80	44.269	Chlorocebus_sabaeus
FBgn0019938	RpI1	99	42.932	ENSCPBG00000001115	POLR1A	80	44.387	Chrysemys_picta_bellii
FBgn0019938	RpI1	99	41.801	ENSCSAVG00000007184	-	99	41.806	Ciona_savignyi
FBgn0019938	RpI1	99	41.299	ENSCGRG00001006651	Polr1a	80	41.423	Cricetulus_griseus_chok1gshd
FBgn0019938	RpI1	59	46.363	ENSCGRG00000010834	Polr1a	68	48.876	Cricetulus_griseus_crigri
FBgn0019938	RpI1	99	41.527	ENSCSEG00000020190	polr1a	79	42.265	Cynoglossus_semilaevis
FBgn0019938	RpI1	99	43.709	ENSCVAG00000020941	polr1a	92	48.571	Cyprinodon_variegatus
FBgn0019938	RpI1	99	42.874	ENSDARG00000098375	polr1a	79	44.290	Danio_rerio
FBgn0019938	RpI1	99	41.754	ENSDNOG00000010829	POLR1A	79	44.017	Dasypus_novemcinctus
FBgn0019938	RpI1	69	43.784	ENSETEG00000000412	-	60	43.784	Echinops_telfairi
FBgn0019938	RpI1	72	55.285	ENSEBUG00000005667	-	83	55.285	Eptatretus_burgeri
FBgn0019938	RpI1	99	43.587	ENSEASG00005001625	POLR1A	79	45.249	Equus_asinus_asinus
FBgn0019938	RpI1	99	43.438	ENSECAG00000010092	POLR1A	79	44.883	Equus_caballus
FBgn0019938	RpI1	99	43.438	ENSECAG00000036306	-	91	50.455	Equus_caballus
FBgn0019938	RpI1	99	43.438	ENSECAG00000030510	-	79	44.883	Equus_caballus
FBgn0019938	RpI1	74	65.574	ENSEEUG00000000676	POLR1A	55	65.574	Erinaceus_europaeus
FBgn0019938	RpI1	99	42.623	ENSELUG00000012769	polr1a	79	43.367	Esox_lucius
FBgn0019938	RpI1	99	43.790	ENSFCAG00000008966	POLR1A	79	44.956	Felis_catus
FBgn0019938	RpI1	99	43.150	ENSFALG00000010082	POLR1A	79	44.812	Ficedula_albicollis
FBgn0019938	RpI1	99	43.094	ENSFHEG00000005996	polr1a	79	45.018	Fundulus_heteroclitus
FBgn0019938	RpI1	89	46.389	ENSGMOG00000002230	polr1a	72	49.225	Gadus_morhua
FBgn0019938	RpI1	89	41.710	ENSGALG00000038160	-	86	44.453	Gallus_gallus
FBgn0019938	RpI1	99	42.755	ENSGAFG00000015266	polr1a	99	42.857	Gambusia_affinis
FBgn0019938	RpI1	99	43.017	ENSGACG00000018791	polr1a	80	43.787	Gasterosteus_aculeatus
FBgn0019938	RpI1	88	45.641	ENSGAGG00000004984	-	96	47.541	Gopherus_agassizii
FBgn0019938	RpI1	80	50.267	ENSHBUG00000020021	polr1a	87	50.267	Haplochromis_burtoni
FBgn0019938	RpI1	89	46.729	ENSHCOG00000003345	polr1a	73	49.761	Hippocampus_comes
FBgn0019938	RpI1	99	42.958	ENSIPUG00000013174	polr1a	79	44.029	Ictalurus_punctatus
FBgn0019938	RpI1	99	43.376	ENSSTOG00000012580	POLR1A	79	45.066	Ictidomys_tridecemlineatus
FBgn0019938	RpI1	99	43.257	ENSJJAG00000013113	Polr1a	79	44.541	Jaculus_jaculus
FBgn0019938	RpI1	99	43.861	ENSKMAG00000007399	polr1a	80	45.058	Kryptolebias_marmoratus
FBgn0019938	RpI1	53	42.191	ENSLACG00000003218	polr1a	99	42.191	Latimeria_chalumnae
FBgn0019938	RpI1	99	42.998	ENSLOCG00000010881	polr1a	78	43.910	Lepisosteus_oculatus
FBgn0019938	RpI1	99	42.543	ENSLAFG00000014948	POLR1A	79	44.259	Loxodonta_africana
FBgn0019938	RpI1	99	43.180	ENSMFAG00000046097	POLR1A	80	44.341	Macaca_fascicularis
FBgn0019938	RpI1	99	43.180	ENSMMUG00000015815	POLR1A	80	44.341	Macaca_mulatta
FBgn0019938	RpI1	99	43.180	ENSMNEG00000043313	POLR1A	80	44.341	Macaca_nemestrina
FBgn0019938	RpI1	99	42.774	ENSMLEG00000042428	POLR1A	80	44.126	Mandrillus_leucophaeus
FBgn0019938	RpI1	99	42.840	ENSMAMG00000016565	polr1a	78	44.825	Mastacembelus_armatus
FBgn0019938	RpI1	99	43.314	ENSMZEG00005004915	polr1a	79	44.610	Maylandia_zebra
FBgn0019938	RpI1	99	41.846	ENSMGAG00000013111	POLR1A	79	43.851	Meleagris_gallopavo
FBgn0019938	RpI1	89	45.083	ENSMAUG00000008497	Polr1a	76	46.733	Mesocricetus_auratus
FBgn0019938	RpI1	99	43.056	ENSMICG00000000757	POLR1A	79	44.938	Microcebus_murinus
FBgn0019938	RpI1	99	43.246	ENSMOCG00000000122	Polr1a	80	44.718	Microtus_ochrogaster
FBgn0019938	RpI1	99	42.704	ENSMMOG00000010216	polr1a	78	43.806	Mola_mola
FBgn0019938	RpI1	99	41.190	ENSMODG00000009335	POLR1A	86	63.934	Monodelphis_domestica
FBgn0019938	RpI1	99	42.966	ENSMALG00000013363	polr1a	79	44.930	Monopterus_albus
FBgn0019938	RpI1	99	42.940	MGP_CAROLIEiJ_G0028494	Polr1a	79	44.534	Mus_caroli
FBgn0019938	RpI1	99	42.890	MGP_PahariEiJ_G0022230	Polr1a	79	44.404	Mus_pahari
FBgn0019938	RpI1	99	42.213	MGP_SPRETEiJ_G0029499	Polr1a	90	51.923	Mus_spretus
FBgn0019938	RpI1	99	43.430	ENSMPUG00000009135	POLR1A	80	44.484	Mustela_putorius_furo
FBgn0019938	RpI1	99	42.981	ENSMLUG00000015723	POLR1A	80	43.911	Myotis_lucifugus
FBgn0019938	RpI1	83	43.247	ENSNGAG00000017907	Polr1a	81	43.692	Nannospalax_galili
FBgn0019938	RpI1	99	43.162	ENSNBRG00000000519	polr1a	79	44.684	Neolamprologus_brichardi
FBgn0019938	RpI1	99	41.782	ENSNLEG00000002264	POLR1A	85	46.916	Nomascus_leucogenys
FBgn0019938	RpI1	74	62.295	ENSMEUG00000011665	-	66	62.295	Notamacropus_eugenii
FBgn0019938	RpI1	91	42.743	ENSOPRG00000008269	POLR1A	75	44.093	Ochotona_princeps
FBgn0019938	RpI1	99	42.139	ENSONIG00000015895	polr1a	79	44.133	Oreochromis_niloticus
FBgn0019938	RpI1	99	43.132	ENSOCUG00000010138	POLR1A	80	44.357	Oryctolagus_cuniculus
FBgn0019938	RpI1	99	43.680	ENSORLG00000008753	polr1a	80	44.877	Oryzias_latipes
FBgn0019938	RpI1	99	42.755	ENSORLG00020020726	polr1a	91	48.792	Oryzias_latipes_hni
FBgn0019938	RpI1	87	46.988	ENSORLG00015016071	polr1a	72	48.621	Oryzias_latipes_hsok
FBgn0019938	RpI1	99	43.445	ENSOGAG00000004031	POLR1A	80	44.452	Otolemur_garnettii
FBgn0019938	RpI1	99	43.615	ENSPPRG00000006702	POLR1A	79	45.029	Panthera_pardus
FBgn0019938	RpI1	99	43.231	ENSPTIG00000018783	POLR1A	79	44.541	Panthera_tigris_altaica
FBgn0019938	RpI1	99	43.122	ENSPANG00000025908	POLR1A	80	44.269	Papio_anubis
FBgn0019938	RpI1	99	42.690	ENSPKIG00000005468	polr1a	79	44.231	Paramormyrops_kingsleyae
FBgn0019938	RpI1	62	44.199	ENSPSIG00000009321	-	67	47.945	Pelodiscus_sinensis
FBgn0019938	RpI1	56	44.708	ENSPMGG00000009718	polr1a	95	44.708	Periophthalmus_magnuspinnatus
FBgn0019938	RpI1	99	42.874	ENSPEMG00000022224	Polr1a	78	44.591	Peromyscus_maniculatus_bairdii
FBgn0019938	RpI1	94	41.194	ENSPCIG00000004222	POLR1A	83	43.497	Phascolarctos_cinereus
FBgn0019938	RpI1	99	42.849	ENSPFOG00000005025	polr1a	79	44.113	Poecilia_formosa
FBgn0019938	RpI1	99	43.304	ENSPLAG00000021389	polr1a	79	44.912	Poecilia_latipinna
FBgn0019938	RpI1	99	41.608	ENSPMEG00000006463	polr1a	91	47.619	Poecilia_mexicana
FBgn0019938	RpI1	99	42.874	ENSPREG00000002389	polr1a	90	47.590	Poecilia_reticulata
FBgn0019938	RpI1	99	42.708	ENSPPYG00000012217	POLR1A	80	43.871	Pongo_abelii
FBgn0019938	RpI1	86	42.798	ENSPCAG00000011582	POLR1A	79	47.833	Procavia_capensis
FBgn0019938	RpI1	99	43.080	ENSPCOG00000026987	POLR1A	79	44.534	Propithecus_coquereli
FBgn0019938	RpI1	91	46.148	ENSPVAG00000012674	POLR1A	72	48.778	Pteropus_vampyrus
FBgn0019938	RpI1	99	43.254	ENSPNYG00000000026	polr1a	79	44.535	Pundamilia_nyererei
FBgn0019938	RpI1	99	43.644	ENSPNAG00000019223	polr1a	75	50.142	Pygocentrus_nattereri
FBgn0019938	RpI1	99	43.098	ENSRNOG00000009545	Polr1a	80	43.670	Rattus_norvegicus
FBgn0019938	RpI1	99	42.973	ENSRBIG00000028335	POLR1A	80	44.229	Rhinopithecus_bieti
FBgn0019938	RpI1	99	42.973	ENSRROG00000031473	POLR1A	92	50.725	Rhinopithecus_roxellana
FBgn0019938	RpI1	90	38.281	YOR341W	RPA190	79	40.561	Saccharomyces_cerevisiae
FBgn0019938	RpI1	99	43.312	ENSSBOG00000030262	POLR1A	80	44.468	Saimiri_boliviensis_boliviensis
FBgn0019938	RpI1	99	38.320	ENSSHAG00000014739	POLR1A	91	49.767	Sarcophilus_harrisii
FBgn0019938	RpI1	99	42.866	ENSSFOG00015019716	polr1a	79	43.764	Scleropages_formosus
FBgn0019938	RpI1	99	43.229	ENSSMAG00000014342	polr1a	74	49.062	Scophthalmus_maximus
FBgn0019938	RpI1	99	42.249	ENSSDUG00000014631	polr1a	78	44.478	Seriola_dumerili
FBgn0019938	RpI1	90	46.788	ENSSLDG00000024095	polr1a	74	49.810	Seriola_lalandi_dorsalis
FBgn0019938	RpI1	69	72.500	ENSSARG00000003136	-	67	72.500	Sorex_araneus
FBgn0019938	RpI1	91	50.000	ENSSPUG00000004215	POLR1A	95	50.000	Sphenodon_punctatus
FBgn0019938	RpI1	65	49.213	ENSSPAG00000016341	polr1a	99	43.467	Stegastes_partitus
FBgn0019938	RpI1	83	44.109	ENSSSCG00000008226	POLR1A	95	45.069	Sus_scrofa
FBgn0019938	RpI1	98	42.707	ENSTGUG00000010704	POLR1A	99	42.522	Taeniopygia_guttata
FBgn0019938	RpI1	99	42.925	ENSTRUG00000002210	polr1a	96	42.460	Takifugu_rubripes
FBgn0019938	RpI1	99	39.953	ENSTNIG00000010116	polr1a	91	41.905	Tetraodon_nigroviridis
FBgn0019938	RpI1	65	71.795	ENSTBEG00000008646	POLR1A	58	71.795	Tupaia_belangeri
FBgn0019938	RpI1	99	41.351	ENSTTRG00000008597	POLR1A	93	49.091	Tursiops_truncatus
FBgn0019938	RpI1	68	48.947	ENSUAMG00000012158	-	68	51.968	Ursus_americanus
FBgn0019938	RpI1	99	43.860	ENSUMAG00000006700	POLR1A	97	44.397	Ursus_maritimus
FBgn0019938	RpI1	99	43.190	ENSVVUG00000001245	POLR1A	80	44.516	Vulpes_vulpes
FBgn0019938	RpI1	99	40.583	ENSXETG00000001952	polr1a	95	42.198	Xenopus_tropicalis
FBgn0019938	RpI1	99	42.866	ENSXMAG00000004032	polr1a	78	44.181	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001054	RNA polymerase I activity	21873635.	IBA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	21873635.	IBA	Function
GO:0005736	RNA polymerase I complex	21873635.	IBA	Component
GO:0006351	transcription, DNA-templated	-	IEA	Process
GO:0008270	zinc ion binding	-	IEA	Function