EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0020618 (Gene tree)
Gene ID: 34070
Gene Symbol: Rack1
Alias: -
Full Name: Receptor of activated protein kinase C 1
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 1969
Position: chr2L: 7825347-7827315
Accession: FBgn0020618
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0331237	-	1342	-	FBpp0303679	109 (aa)	-	M9PB67
FBtr0079565	-	1106	-	FBpp0079187	318 (aa)	-	O18640
FBtr0345448	-	1175	-	FBpp0311572	318 (aa)	-	O18640
FBtr0331238	-	1388	-	FBpp0303680	318 (aa)	-	O18640

Gene Model

Click here to download FBgn0020618's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0020618's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0020618	Rack1	99	67.081	WBGene00010556	rack-1	99	67.081	Caenorhabditis_elegans
FBgn0020618	Rack1	99	79.812	ENSG00000204628	RACK1	100	79.487	Homo_sapiens
FBgn0020618	Rack1	99	77.143	ENSMUSG00000020372	Rack1	99	77.143	Mus_musculus
FBgn0020618	Rack1	98	59.615	YMR116C	ASC1	97	52.381	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	18981222.	IC	Process
GO:0001933	negative regulation of protein phosphorylation	26021350.	IMP	Process
GO:0001934	positive regulation of protein phosphorylation	21873635.	IBA	Process
GO:0005080	protein kinase C binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005737	cytoplasm	17584887.	IDA	Component
GO:0005776	autophagosome	22562043.	IDA	Component
GO:0005829	cytosol	25294944.	HDA	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0007626	locomotory behavior	17584887.	IMP	Process
GO:0009267	cellular response to starvation	22562043.	IMP	Process
GO:0016243	regulation of autophagosome size	22562043.	IMP	Process
GO:0018991	oviposition	17584887.	IMP	Process
GO:0019899	enzyme binding	21873635.	IBA	Function
GO:0022627	cytosolic small ribosomal subunit	21873635.	IBA	Component
GO:0030838	positive regulation of actin filament polymerization	26021350.	IMP	Process
GO:0035220	wing disc development	17584887.	IMP	Process
GO:0042335	cuticle development	17584887.	IMP	Process
GO:0043022	ribosome binding	21873635.	IBA	Function
GO:0044829	positive regulation by host of viral genome replication	25416947.	IMP	Process
GO:0045725	positive regulation of glycogen biosynthetic process	22562043.	IMP	Process
GO:0046716	muscle cell cellular homeostasis	21256839.	IGI	Process
GO:0048477	oogenesis	17584887.	IMP	Process
GO:0071011	precatalytic spliceosome	18981222.	HDA	Component
GO:0071013	catalytic step 2 spliceosome	18981222.	HDA	Component
GO:0072344	rescue of stalled ribosome	21873635.	IBA	Process
GO:0075522	IRES-dependent viral translational initiation	25416947.	IMP	Process