EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0021761 (Gene tree)
Gene ID: 34527
Gene Symbol: Nup154
Alias: -
Full Name: Nucleoporin 154kD
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 6102
Position: chr2L: 11004820-11010921
Accession: FBgn0021761
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0340224	-	4612	-	FBpp0309199	1365 (aa)	-	O62536
FBtr0340225	-	5420	-	FBpp0309200	1365 (aa)	-	Q9V463
FBtr0089881	-	4371	-	FBpp0088820	1365 (aa)	-	Q9V463

Gene Model

Click here to download FBgn0021761's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0021761's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0021761	Nup154	99	32.837	ENSG00000113569	NUP155	99	32.582	Homo_sapiens
FBgn0021761	Nup154	99	32.512	ENSMUSG00000022142	Nup155	98	32.578	Mus_musculus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000972	transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery	21873635.	IBA	Process
GO:0001555	oocyte growth	9732281.17410542.	IMP	Process
GO:0001654	eye development	10511559.	IMP	Process
GO:0003682	chromatin binding	22718353.	IDA	Function
GO:0005515	protein binding	17277377.22718353.	IPI	Function
GO:0005634	nucleus	9732281.17410542.22718353.	IDA	Component
GO:0005635	nuclear envelope	17277377.20144761.	IDA	Component
GO:0005635	nuclear envelope	22718353.	IDA	Component
GO:0005643	nuclear pore	17410542.	IDA	Component
GO:0005737	cytoplasm	17410542.22718353.	IDA	Component
GO:0006606	protein import into nucleus	21873635.	IBA	Process
GO:0007015	actin filament organization	17410542.	IMP	Process
GO:0007140	male meiotic nuclear division	9732281.	IMP	Process
GO:0007281	germ cell development	10511559.	IMP	Process
GO:0007283	spermatogenesis	9732281.	IMP	Process
GO:0007295	growth of a germarium-derived egg chamber	9732281.	IMP	Process
GO:0007303	cytoplasmic transport, nurse cell to oocyte	17410542.	IMP	Process
GO:0017056	structural constituent of nuclear pore	21873635.	IBA	Function
GO:0030715	oocyte growth in germarium-derived egg chamber	17277377.	IGI	Process
GO:0030717	oocyte karyosome formation	26341556.	IMP	Process
GO:0034399	nuclear periphery	9732281.17410542.	IDA	Component
GO:0035220	wing disc development	10511559.	IMP	Process
GO:0036228	protein localization to nuclear inner membrane	21873635.	IBA	Process
GO:0036228	protein localization to nuclear inner membrane	22718353.	IMP	Process
GO:0042307	positive regulation of protein import into nucleus	21696798.	IMP	Process
GO:0044611	nuclear pore inner ring	21873635.	IBA	Component
GO:0045477	regulation of nurse cell apoptotic process	17410542.	IMP	Process
GO:0048477	oogenesis	9732281.	IMP	Process
GO:0055050	astral spindle assembly involved in male meiosis	9732281.	IMP	Process
GO:1900182	positive regulation of protein localization to nucleus	9732281.	IDA	Process
GO:1905475	regulation of protein localization to membrane	26341556.	IMP	Process
GO:1905879	regulation of oogenesis	17277377.17410542.	IMP	Process
GO:1905938	positive regulation of germ cell proliferation	21696798.	IMP	Process