EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
FBgn0022943 (Gene tree)
Gene ID
42166
Gene Symbol
Cbp20
Alias
-
Full Name
cap binding protein 20
Gene Type
protein_coding
Species
Drosophila_melanogaster
Status
putative
Strand
Plus strand
Length
779 bases
Position
chr3R:18164661-18165439
Accession
FBgn0022943
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
FBpp0082973RRM_1PF00076.221.3e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
FBtr0083551-600-FBpp0082973154 (aa)-Q9V3L6
Gene Model
Click here to download FBgn0022943's gene model file
Protein-Protein Interaction (PPI)

Clik here to download FBgn0022943's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
FBgn0022943Cbp209063.309ENSG00000170935NCBP2L9063.309Homo_sapiens
FBgn0022943Cbp209078.261ENSG00000114503NCBP29982.927Homo_sapiens
FBgn0022943Cbp209773.154ENSAPOG00000016180ncbp29173.154Acanthochromis_polyacanthus
FBgn0022943Cbp209078.261ENSAMEG00000003664-8878.261Ailuropoda_melanoleuca
FBgn0022943Cbp209151.429ENSAMEG00000019790-9251.429Ailuropoda_melanoleuca
FBgn0022943Cbp209060.432ENSAMEG00000018655NCBP2L9060.432Ailuropoda_melanoleuca
FBgn0022943Cbp209275.887ENSACIG00000010008ncbp28675.887Amphilophus_citrinellus
FBgn0022943Cbp208476.744ENSAOCG00000002198ncbp27076.744Amphiprion_ocellaris
FBgn0022943Cbp209275.887ENSAPEG00000013395ncbp28675.887Amphiprion_percula
FBgn0022943Cbp209772.483ENSATEG00000021649ncbp29172.483Anabas_testudineus
FBgn0022943Cbp208875.556ENSAPLG00000013779-9675.556Anas_platyrhynchos
FBgn0022943Cbp208476.744ENSAPLG00000014522-9876.744Anas_platyrhynchos
FBgn0022943Cbp209577.551ENSACAG00000015128-8877.551Anolis_carolinensis
FBgn0022943Cbp209078.261ENSANAG00000018285NCBP29376.562Aotus_nancymaae
FBgn0022943Cbp209274.468ENSACLG00000026775ncbp28674.468Astatotilapia_calliptera
FBgn0022943Cbp209076.812ENSAMXG00000041812ncbp28276.812Astyanax_mexicanus
FBgn0022943Cbp209078.261ENSBTAG00000008873NCBP28878.261Bos_taurus
FBgn0022943Cbp209266.667WBGene00009141ncbp-29570.930Caenorhabditis_elegans
FBgn0022943Cbp209078.261ENSCJAG00000039693NCBP29376.562Callithrix_jacchus
FBgn0022943Cbp209066.187ENSCAFG00000017990NCBP2L8566.187Canis_familiaris
FBgn0022943Cbp209078.261ENSCAFG00000013100NCBP28878.261Canis_familiaris
FBgn0022943Cbp209066.187ENSCAFG00020006690NCBP2L8766.187Canis_lupus_dingo
FBgn0022943Cbp209078.261ENSCAFG00020003010-8878.261Canis_lupus_dingo
FBgn0022943Cbp209647.297ENSCAFG00020004265-9247.297Canis_lupus_dingo
FBgn0022943Cbp209061.151ENSCHIG00000020051NCBP2L8961.151Capra_hircus
FBgn0022943Cbp209078.261ENSCHIG00000025737-8878.261Capra_hircus
FBgn0022943Cbp208148.387ENSCHIG00000018869-8448.387Capra_hircus
FBgn0022943Cbp209078.261ENSTSYG00000014263-9475.385Carlito_syrichta
FBgn0022943Cbp209276.761ENSCPOG00000002976NCBP29176.761Cavia_porcellus
FBgn0022943Cbp209078.261ENSCCAG00000025053NCBP29475.385Cebus_capucinus
FBgn0022943Cbp209078.261ENSCATG00000030004NCBP29376.562Cercocebus_atys
FBgn0022943Cbp209276.761ENSCLAG00000012808NCBP29176.761Chinchilla_lanigera
FBgn0022943Cbp209078.261ENSCSAG00000008705NCBP25978.261Chlorocebus_sabaeus
FBgn0022943Cbp208964.234ENSCSAG00000000310NCBP2L8964.234Chlorocebus_sabaeus
FBgn0022943Cbp209076.087ENSCHOG00000005967-8876.087Choloepus_hoffmanni
FBgn0022943Cbp209275.352ENSCPBG00000004735-9075.352Chrysemys_picta_bellii
FBgn0022943Cbp209278.723ENSCPBG00000016711-8478.723Chrysemys_picta_bellii
FBgn0022943Cbp208873.529ENSCING00000018317-7473.529Ciona_intestinalis
FBgn0022943Cbp209071.014ENSCSAVG00000005823-7571.014Ciona_savignyi
FBgn0022943Cbp208376.562ENSCANG00000039404NCBP29376.562Colobus_angolensis_palliatus
FBgn0022943Cbp209276.056ENSCGRG00001017056Ncbp29176.056Cricetulus_griseus_chok1gshd
FBgn0022943Cbp209276.056ENSCGRG00000014761Ncbp29176.056Cricetulus_griseus_crigri
FBgn0022943Cbp209774.000ENSCSEG00000019322ncbp29173.826Cynoglossus_semilaevis
FBgn0022943Cbp209574.667ENSCVAG00000012766ncbp29174.667Cyprinodon_variegatus
FBgn0022943Cbp209275.887ENSDARG00000014898ncbp29175.887Danio_rerio
FBgn0022943Cbp209162.143ENSDNOG00000004831NCBP2L8962.143Dasypus_novemcinctus
FBgn0022943Cbp208376.562ENSDNOG00000047711NCBP29176.562Dasypus_novemcinctus
FBgn0022943Cbp209078.261ENSDORG00000028653Ncbp28878.261Dipodomys_ordii
FBgn0022943Cbp208254.331ENSETEG00000006407-9754.331Echinops_telfairi
FBgn0022943Cbp207974.590ENSEBUG00000001862-5674.590Eptatretus_burgeri
FBgn0022943Cbp209060.563ENSEASG00005019772NCBP2L8463.380Equus_asinus_asinus
FBgn0022943Cbp209078.261ENSEASG00005006719NCBP28878.261Equus_asinus_asinus
FBgn0022943Cbp208861.151ENSECAG00000003478NCBP2L9364.029Equus_caballus
FBgn0022943Cbp209078.261ENSECAG00000016153NCBP28878.261Equus_caballus
FBgn0022943Cbp209152.857ENSEEUG00000004605NCBP2L9252.857Erinaceus_europaeus
FBgn0022943Cbp209275.177ENSELUG00000018927ncbp29175.177Esox_lucius
FBgn0022943Cbp209078.261ENSFCAG00000029865NCBP29277.778Felis_catus
FBgn0022943Cbp208877.778ENSFALG00000011928-9677.778Ficedula_albicollis
FBgn0022943Cbp209076.978ENSFALG00000007099-8976.978Ficedula_albicollis
FBgn0022943Cbp209276.761ENSFDAG00000010403NCBP29176.761Fukomys_damarensis
FBgn0022943Cbp209077.536ENSFHEG00000002308ncbp28477.536Fundulus_heteroclitus
FBgn0022943Cbp209473.793ENSGMOG00000018657ncbp28873.793Gadus_morhua
FBgn0022943Cbp209077.698ENSGALG00000006843NCBP28977.698Gallus_gallus
FBgn0022943Cbp209376.923ENSGALG00000005753-8576.923Gallus_gallus
FBgn0022943Cbp209278.014ENSGAFG00000010213ncbp28678.014Gambusia_affinis
FBgn0022943Cbp209274.468ENSGACG00000006238ncbp28574.468Gasterosteus_aculeatus
FBgn0022943Cbp209278.723ENSGAGG00000015966-8478.723Gopherus_agassizii
FBgn0022943Cbp209275.352ENSGAGG00000025839-9075.352Gopherus_agassizii
FBgn0022943Cbp209062.590ENSGGOG00000014581NCBP2L9062.590Gorilla_gorilla
FBgn0022943Cbp208376.562ENSGGOG00000042244NCBP29376.562Gorilla_gorilla
FBgn0022943Cbp209275.177ENSHBUG00000003914ncbp27475.177Haplochromis_burtoni
FBgn0022943Cbp209276.761ENSHGLG00000019489NCBP29176.761Heterocephalus_glaber_female
FBgn0022943Cbp209361.644ENSHGLG00000003263-8961.644Heterocephalus_glaber_female
FBgn0022943Cbp209276.761ENSHGLG00100017688NCBP29176.761Heterocephalus_glaber_male
FBgn0022943Cbp208853.285ENSHGLG00100015318-8953.285Heterocephalus_glaber_male
FBgn0022943Cbp209060.432ENSHGLG00100018377-8360.432Heterocephalus_glaber_male
FBgn0022943Cbp209571.918ENSHCOG00000000679ncbp29271.918Hippocampus_comes
FBgn0022943Cbp209276.056ENSSTOG00000001584NCBP29176.056Ictidomys_tridecemlineatus
FBgn0022943Cbp208775.373ENSJJAG00000013908Ncbp28075.373Jaculus_jaculus
FBgn0022943Cbp209277.305ENSKMAG00000009686ncbp28677.305Kryptolebias_marmoratus
FBgn0022943Cbp209275.887ENSLBEG00000020441ncbp28675.887Labrus_bergylta
FBgn0022943Cbp209052.857ENSLACG00000015184-8952.857Latimeria_chalumnae
FBgn0022943Cbp209574.830ENSLACG00000017474ncbp29074.830Latimeria_chalumnae
FBgn0022943Cbp209772.667ENSLOCG00000001518ncbp28972.667Lepisosteus_oculatus
FBgn0022943Cbp209078.261ENSLAFG00000006372NCBP28878.261Loxodonta_africana
FBgn0022943Cbp209070.504ENSLAFG00000027581NCBP2L8870.504Loxodonta_africana
FBgn0022943Cbp209078.261ENSMFAG00000001109NCBP29376.562Macaca_fascicularis
FBgn0022943Cbp209078.261ENSMMUG00000007825NCBP29376.562Macaca_mulatta
FBgn0022943Cbp209078.261ENSMNEG00000040649NCBP29177.778Macaca_nemestrina
FBgn0022943Cbp209771.812ENSMAMG00000011314ncbp29171.812Mastacembelus_armatus
FBgn0022943Cbp209274.468ENSMZEG00005017982ncbp28674.468Maylandia_zebra
FBgn0022943Cbp208676.692ENSMGAG00000002257-9576.692Meleagris_gallopavo
FBgn0022943Cbp209276.056ENSMAUG00000021481Ncbp29176.056Mesocricetus_auratus
FBgn0022943Cbp209075.362ENSMICG00000012328-9175.362Microcebus_murinus
FBgn0022943Cbp209078.261ENSMICG00000049214NCBP210079.070Microcebus_murinus
FBgn0022943Cbp209276.056ENSMOCG00000021390Ncbp29176.056Microtus_ochrogaster
FBgn0022943Cbp209374.825ENSMMOG00000004234ncbp28774.825Mola_mola
FBgn0022943Cbp209273.944ENSMODG00000023276-9173.944Monodelphis_domestica
FBgn0022943Cbp209271.831ENSMODG00000024607-9171.831Monodelphis_domestica
FBgn0022943Cbp209271.831ENSMODG00000024608-9171.831Monodelphis_domestica
FBgn0022943Cbp209075.362ENSMODG00000015908-8875.362Monodelphis_domestica
FBgn0022943Cbp209276.056MGP_CAROLIEiJ_G0020659Ncbp29176.056Mus_caroli
FBgn0022943Cbp209276.056ENSMUSG00000022774Ncbp29176.056Mus_musculus
FBgn0022943Cbp209276.056MGP_PahariEiJ_G0016363Ncbp29176.056Mus_pahari
FBgn0022943Cbp209276.056MGP_SPRETEiJ_G0021555Ncbp29176.056Mus_spretus
FBgn0022943Cbp209574.324ENSMPUG00000003806NCBP29074.324Mustela_putorius_furo
FBgn0022943Cbp209066.187ENSMPUG00000018445NCBP2L8966.187Mustela_putorius_furo
FBgn0022943Cbp209078.261ENSMLUG00000017500NCBP28878.261Myotis_lucifugus
FBgn0022943Cbp206565.000ENSMLUG00000022217-8865.000Myotis_lucifugus
FBgn0022943Cbp209276.056ENSNGAG00000011678Ncbp29176.056Nannospalax_galili
FBgn0022943Cbp209072.973ENSNLEG00000001727NCBP29376.562Nomascus_leucogenys
FBgn0022943Cbp209273.944ENSMEUG00000008126-9173.944Notamacropus_eugenii
FBgn0022943Cbp209273.239ENSMEUG00000004730-9173.239Notamacropus_eugenii
FBgn0022943Cbp209077.536ENSOPRG00000007634-8877.536Ochotona_princeps
FBgn0022943Cbp209052.174ENSOPRG00000006943-8852.174Ochotona_princeps
FBgn0022943Cbp209463.514ENSODEG00000002405-8463.514Octodon_degus
FBgn0022943Cbp209270.548ENSODEG00000013562-9170.548Octodon_degus
FBgn0022943Cbp209070.290ENSODEG00000014452-8870.290Octodon_degus
FBgn0022943Cbp208871.324ENSODEG00000009435-9571.324Octodon_degus
FBgn0022943Cbp209275.177ENSONIG00000008314ncbp28675.177Oreochromis_niloticus
FBgn0022943Cbp209078.261ENSOCUG00000006738NCBP28878.261Oryctolagus_cuniculus
FBgn0022943Cbp209773.826ENSORLG00000011235ncbp29173.826Oryzias_latipes
FBgn0022943Cbp209773.826ENSORLG00020006739ncbp29173.826Oryzias_latipes_hni
FBgn0022943Cbp209773.826ENSORLG00015004376ncbp29173.826Oryzias_latipes_hsok
FBgn0022943Cbp209773.826ENSOMEG00000010498ncbp29173.826Oryzias_melastigma
FBgn0022943Cbp209078.261ENSOGAG00000005009NCBP28878.261Otolemur_garnettii
FBgn0022943Cbp209078.261ENSOARG00000020367-8878.261Ovis_aries
FBgn0022943Cbp209555.479ENSOARG00000006784-9055.479Ovis_aries
FBgn0022943Cbp208376.562ENSPPAG00000036789-9376.562Pan_paniscus
FBgn0022943Cbp208967.883ENSPPRG00000010989NCBP2L9067.883Panthera_pardus
FBgn0022943Cbp209078.261ENSPPRG00000005533NCBP210079.070Panthera_pardus
FBgn0022943Cbp209078.261ENSPTIG00000009963NCBP29277.778Panthera_tigris_altaica
FBgn0022943Cbp208967.153ENSPTIG00000005892NCBP2L9067.153Panthera_tigris_altaica
FBgn0022943Cbp209072.464ENSPTRG00000048726NCBP29270.312Pan_troglodytes
FBgn0022943Cbp209473.103ENSPKIG00000025196ncbp28873.103Paramormyrops_kingsleyae
FBgn0022943Cbp208674.242ENSPSIG00000009533-10074.242Pelodiscus_sinensis
FBgn0022943Cbp208576.336ENSPSIG00000008535-9476.336Pelodiscus_sinensis
FBgn0022943Cbp209276.056ENSPMGG00000023837ncbp28776.056Periophthalmus_magnuspinnatus
FBgn0022943Cbp209078.986ENSPMAG00000007450ncbp28278.986Petromyzon_marinus
FBgn0022943Cbp208654.545ENSPMAG00000006518-5654.545Petromyzon_marinus
FBgn0022943Cbp209074.638ENSPCIG00000005127-8874.638Phascolarctos_cinereus
FBgn0022943Cbp209574.667ENSPFOG00000014473ncbp29074.667Poecilia_formosa
FBgn0022943Cbp209574.667ENSPLAG00000022463ncbp29174.667Poecilia_latipinna
FBgn0022943Cbp209574.667ENSPMEG00000018372ncbp29174.667Poecilia_mexicana
FBgn0022943Cbp209574.667ENSPREG00000021643ncbp29174.667Poecilia_reticulata
FBgn0022943Cbp209078.261ENSPPYG00000014449NCBP27478.261Pongo_abelii
FBgn0022943Cbp209062.590ENSPPYG00000020614NCBP2L9062.590Pongo_abelii
FBgn0022943Cbp209078.986ENSPCAG00000003219NCBP28878.986Procavia_capensis
FBgn0022943Cbp209078.261ENSPCOG00000017267NCBP29277.778Propithecus_coquereli
FBgn0022943Cbp209078.986ENSPVAG00000017273NCBP28878.986Pteropus_vampyrus
FBgn0022943Cbp209275.177ENSPNYG00000015623ncbp28675.177Pundamilia_nyererei
FBgn0022943Cbp209772.667ENSPNAG00000005941ncbp29172.667Pygocentrus_nattereri
FBgn0022943Cbp209276.056ENSRNOG00000001746Ncbp29176.056Rattus_norvegicus
FBgn0022943Cbp209276.056ENSRNOG00000048589Ncbp29176.056Rattus_norvegicus
FBgn0022943Cbp209077.536ENSRBIG00000028514NCBP210079.070Rhinopithecus_bieti
FBgn0022943Cbp209077.536ENSRROG00000032530-9375.781Rhinopithecus_roxellana
FBgn0022943Cbp207755.462YPL178WCBC25755.462Saccharomyces_cerevisiae
FBgn0022943Cbp208956.204ENSSBOG00000006326-8556.204Saimiri_boliviensis_boliviensis
FBgn0022943Cbp209273.944ENSSHAG00000012279-9173.944Sarcophilus_harrisii
FBgn0022943Cbp208375.000ENSSHAG00000004363-9775.000Sarcophilus_harrisii
FBgn0022943Cbp209772.000ENSSFOG00015014972ncbp29172.000Scleropages_formosus
FBgn0022943Cbp209275.887ENSSMAG00000020056ncbp28675.887Scophthalmus_maximus
FBgn0022943Cbp209773.154ENSSDUG00000015448ncbp29173.154Seriola_dumerili
FBgn0022943Cbp209773.826ENSSLDG00000020381ncbp27573.826Seriola_lalandi_dorsalis
FBgn0022943Cbp209074.638ENSSARG00000014294NCBP28874.638Sorex_araneus
FBgn0022943Cbp208673.485ENSSPUG00000016545-9073.643Sphenodon_punctatus
FBgn0022943Cbp208973.913ENSSPUG00000000715-8473.913Sphenodon_punctatus
FBgn0022943Cbp209275.887ENSSPAG00000021582ncbp28675.887Stegastes_partitus
FBgn0022943Cbp209078.261ENSSSCG00000027323NCBP28878.261Sus_scrofa
FBgn0022943Cbp208865.185ENSSSCG00000012562NCBP2L8965.185Sus_scrofa
FBgn0022943Cbp209076.978ENSTGUG00000008864-8976.978Taeniopygia_guttata
FBgn0022943Cbp207781.356ENSTGUG00000007323-9281.356Taeniopygia_guttata
FBgn0022943Cbp209771.812ENSTRUG00000018355ncbp29171.812Takifugu_rubripes
FBgn0022943Cbp209275.177ENSTNIG00000006065ncbp29075.177Tetraodon_nigroviridis
FBgn0022943Cbp207775.630ENSTBEG00000015222NCBP28975.630Tupaia_belangeri
FBgn0022943Cbp209078.261ENSTTRG00000013908NCBP28878.261Tursiops_truncatus
FBgn0022943Cbp209064.748ENSUAMG00000006936NCBP2L8664.748Ursus_americanus
FBgn0022943Cbp207875.833ENSUAMG00000023879NCBP27475.833Ursus_americanus
FBgn0022943Cbp209064.748ENSUMAG00000010623NCBP2L8664.748Ursus_maritimus
FBgn0022943Cbp209078.261ENSUMAG00000003147NCBP28878.261Ursus_maritimus
FBgn0022943Cbp208276.984ENSVPAG00000010369NCBP29776.984Vicugna_pacos
FBgn0022943Cbp209078.261ENSVVUG00000008595NCBP28878.261Vulpes_vulpes
FBgn0022943Cbp209045.324ENSVVUG00000009790-7445.324Vulpes_vulpes
FBgn0022943Cbp209081.295ENSXETG00000019384ncbp28981.295Xenopus_tropicalis
FBgn0022943Cbp209574.667ENSXCOG00000010968ncbp29174.667Xiphophorus_couchianus
FBgn0022943Cbp209574.667ENSXMAG00000010096ncbp29174.667Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000339RNA cap binding21873635.IBAFunction
GO:0000398mRNA splicing, via spliceosome21873635.IBAProcess
GO:0000398mRNA splicing, via spliceosome18981222.ICProcess
GO:0000398mRNA splicing, via spliceosome10908584.ISSProcess
GO:0003729mRNA binding10908586.ISSFunction
GO:0005515protein binding19632183.IPIFunction
GO:0005681spliceosomal complex10908584.ISSComponent
GO:0005846nuclear cap binding complex21873635.IBAComponent
GO:0016246RNA interference19632183.IMPProcess
GO:0030422production of siRNA involved in RNA interference19632183.IMPProcess
GO:0031053primary miRNA processing19632183.IMPProcess
GO:0035195gene silencing by miRNA19632183.IMPProcess
GO:0045071negative regulation of viral genome replication19632183.IMPProcess
GO:0045292mRNA cis splicing, via spliceosome-IEAProcess
GO:0071011precatalytic spliceosome18981222.HDAComponent
GO:0071013catalytic step 2 spliceosome18981222.HDAComponent

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