EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: FBgn0022959 (Gene tree)
Gene ID: 39377
Gene Symbol: yps
Alias: -
Full Name: ypsilon schachtel
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 3877 bases
Position: chr3L:12121274-12125150
Accession: FBgn0022959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0297134	CSD	PF00313.22	7.1e-27	1	1
FBpp0075759	CSD	PF00313.22	7.2e-27	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0076027	-	1750	-	FBpp0075759	352 (aa)	-	M9NFR5
FBtr0305992	-	2677	-	FBpp0297134	340 (aa)	-	M9NFR5

Gene Model

Click here to download FBgn0022959's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0022959's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	18981222.	IC	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003729	mRNA binding	11700288.	TAS	Function
GO:0005515	protein binding	16256742.	IPI	Function
GO:0048477	oogenesis	11700288.	NAS	Process
GO:0071011	precatalytic spliceosome	18981222.	HDA	Component
GO:0071013	catalytic step 2 spliceosome	18981222.	HDA	Component
GO:0071598	neuronal ribonucleoprotein granule	17178403.	IDA	Component
GO:1990124	messenger ribonucleoprotein complex	17178403.	IDA	Component