EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Gene Ontology
Description
Ensembl ID
FBgn0022987 (Gene tree)
Gene ID
36966
Gene Symbol
qkr54B
Alias
-
Full Name
quaking related 54B
Gene Type
protein_coding
Species
Drosophila_melanogaster
Status
confidence
Strand
Plus strand
Length
5506 bases
Position
chr2R:17469624-17475129
Accession
FBgn0022987
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
FBpp0086079KH_1PF00013.294.6e-0711
FBpp0086081KH_1PF00013.294.6e-0711
FBpp0297358KH_1PF00013.294.6e-0711
FBpp0303881KH_1PF00013.297.3e-0711
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27378189Global changes of the RNA bound proteome during the maternal-to-zygotic transition in DrosophilaIC & embryos.MZT2016 Jul 5Sysoev VODOI: 10.1038/ncomms12128
27197210The mRNA-bound proteome of the early fly embryoIC & embryos2016 Apr 28Wessels HHDOI: 10.1101/gr.200386.115
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
FBtr0331464-3963-FBpp0303881617 (aa)-A0A0B4KFT9
FBtr0086923-2201-FBpp0086079428 (aa)-Q7KNS5
FBtr0306248-3482-FBpp0297358428 (aa)-Q7KNS5
FBtr0086925-2551-FBpp0086081428 (aa)-Q7KNS5
Gene Model
Click here to download FBgn0022987's gene model file
Protein-Protein Interaction (PPI)

Clik here to download FBgn0022987's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
FBgn0022987qkr54B8644.800FBgn0022986qkr58E-19244.845
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003723RNA binding9804767.IDAFunction
GO:0005737cytoplasm9804767.IDAComponent

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