EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0023171 (Gene tree)
Gene ID: 35746
Gene Symbol: rnh1
Alias: -
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 1327 bases
Position: chr2R:7931054-7932380
Accession: FBgn0023171
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0089188	RNase_H	PF00075.24	2.3e-42	1	1
FBpp0087959	RNase_H	PF00075.24	2.7e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0088883	-	1108	-	FBpp0087959	333 (aa)	-	O44114
FBtr0088884	-	1051	-	FBpp0089188	314 (aa)	-	A1Z768

Gene Model

Click here to download FBgn0023171's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0023171's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0023171	rnh1	95	36.120	ENSG00000171865	RNASEH1	92	36.120	Homo_sapiens
FBgn0023171	rnh1	94	37.500	ENSAPOG00000000412	rnaseh1	89	37.838	Acanthochromis_polyacanthus
FBgn0023171	rnh1	92	37.241	ENSAMEG00000018433	RNASEH1	88	37.241	Ailuropoda_melanoleuca
FBgn0023171	rnh1	93	36.570	ENSACIG00000014666	rnaseh1	86	37.113	Amphilophus_citrinellus
FBgn0023171	rnh1	93	35.556	ENSAOCG00000015210	rnaseh1	88	36.897	Amphiprion_ocellaris
FBgn0023171	rnh1	92	37.755	ENSAPEG00000014104	rnaseh1	88	38.095	Amphiprion_percula
FBgn0023171	rnh1	92	38.408	ENSATEG00000000598	rnaseh1	93	38.408	Anabas_testudineus
FBgn0023171	rnh1	89	36.201	ENSAPLG00000001961	RNASEH1	99	36.201	Anas_platyrhynchos
FBgn0023171	rnh1	92	34.286	ENSACAG00000016857	rnaseh1	90	34.286	Anolis_carolinensis
FBgn0023171	rnh1	95	35.333	ENSANAG00000024055	RNASEH1	92	35.333	Aotus_nancymaae
FBgn0023171	rnh1	92	37.586	ENSACLG00000006741	rnaseh1	87	37.586	Astatotilapia_calliptera
FBgn0023171	rnh1	93	35.395	ENSAMXG00000042940	rnaseh1	96	34.932	Astyanax_mexicanus
FBgn0023171	rnh1	94	36.333	ENSBTAG00000016235	RNASEH1	92	36.333	Bos_taurus
FBgn0023171	rnh1	94	32.886	WBGene00004382	rnh-1.0	98	32.886	Caenorhabditis_elegans
FBgn0023171	rnh1	95	35.855	ENSCJAG00000035450	RNASEH1	92	35.855	Callithrix_jacchus
FBgn0023171	rnh1	92	37.024	ENSCAFG00000003259	RNASEH1	89	36.986	Canis_familiaris
FBgn0023171	rnh1	60	32.086	ENSCHIG00000022230	-	76	32.086	Capra_hircus
FBgn0023171	rnh1	94	36.149	ENSCHIG00000022264	-	90	36.149	Capra_hircus
FBgn0023171	rnh1	92	37.716	ENSTSYG00000012926	RNASEH1	88	37.716	Carlito_syrichta
FBgn0023171	rnh1	87	35.294	ENSCAPG00000004813	RNASEH1	97	35.294	Cavia_aperea
FBgn0023171	rnh1	92	36.678	ENSCPOG00000022278	Rnaseh1	86	36.678	Cavia_porcellus
FBgn0023171	rnh1	95	34.983	ENSCCAG00000038017	RNASEH1	92	34.983	Cebus_capucinus
FBgn0023171	rnh1	92	37.113	ENSCATG00000016515	-	89	37.113	Cercocebus_atys
FBgn0023171	rnh1	95	33.779	ENSCATG00000016818	-	92	33.779	Cercocebus_atys
FBgn0023171	rnh1	92	38.408	ENSCLAG00000002440	RNASEH1	89	38.408	Chinchilla_lanigera
FBgn0023171	rnh1	92	36.552	ENSCSAG00000006943	RNASEH1	89	36.552	Chlorocebus_sabaeus
FBgn0023171	rnh1	60	41.579	ENSCHOG00000008547	RNASEH1	91	41.579	Choloepus_hoffmanni
FBgn0023171	rnh1	92	37.075	ENSCPBG00000021620	RNASEH1	98	36.860	Chrysemys_picta_bellii
FBgn0023171	rnh1	95	36.364	ENSCING00000014054	-	96	36.364	Ciona_intestinalis
FBgn0023171	rnh1	78	36.546	ENSCSAVG00000000009	-	94	36.546	Ciona_savignyi
FBgn0023171	rnh1	92	37.024	ENSCANG00000037763	RNASEH1	89	37.024	Colobus_angolensis_palliatus
FBgn0023171	rnh1	92	36.552	ENSCGRG00001008950	Rnaseh1	89	38.276	Cricetulus_griseus_chok1gshd
FBgn0023171	rnh1	92	36.552	ENSCGRG00000006029	Rnaseh1	89	38.276	Cricetulus_griseus_crigri
FBgn0023171	rnh1	92	38.276	ENSCSEG00000005741	rnaseh1	93	38.188	Cynoglossus_semilaevis
FBgn0023171	rnh1	92	39.310	ENSCVAG00000018717	rnaseh1	87	39.310	Cyprinodon_variegatus
FBgn0023171	rnh1	92	35.762	ENSDARG00000042571	rnaseh1	97	35.075	Danio_rerio
FBgn0023171	rnh1	92	37.801	ENSDNOG00000016056	RNASEH1	92	35.647	Dasypus_novemcinctus
FBgn0023171	rnh1	92	38.754	ENSDORG00000000704	Rnaseh1	89	38.754	Dipodomys_ordii
FBgn0023171	rnh1	92	35.640	ENSETEG00000012674	RNASEH1	88	35.640	Echinops_telfairi
FBgn0023171	rnh1	93	37.919	ENSEBUG00000008898	rnaseh1	98	37.919	Eptatretus_burgeri
FBgn0023171	rnh1	93	33.904	ENSEBUG00000006116	rnaseh1	78	33.904	Eptatretus_burgeri
FBgn0023171	rnh1	92	38.276	ENSEASG00005022200	RNASEH1	87	38.276	Equus_asinus_asinus
FBgn0023171	rnh1	92	38.276	ENSECAG00000020695	RNASEH1	87	38.276	Equus_caballus
FBgn0023171	rnh1	92	38.225	ENSELUG00000010112	rnaseh1	90	38.225	Esox_lucius
FBgn0023171	rnh1	92	37.113	ENSFCAG00000025832	RNASEH1	88	37.113	Felis_catus
FBgn0023171	rnh1	92	36.860	ENSFALG00000002069	RNASEH1	93	36.700	Ficedula_albicollis
FBgn0023171	rnh1	92	38.062	ENSFDAG00000002035	RNASEH1	79	38.062	Fukomys_damarensis
FBgn0023171	rnh1	92	38.908	ENSGMOG00000013818	rnaseh1	88	38.908	Gadus_morhua
FBgn0023171	rnh1	94	37.500	ENSGALG00000016389	RNASEH1	92	37.500	Gallus_gallus
FBgn0023171	rnh1	92	39.655	ENSGAFG00000001776	rnaseh1	89	39.655	Gambusia_affinis
FBgn0023171	rnh1	94	38.047	ENSGACG00000011935	rnaseh1	90	38.047	Gasterosteus_aculeatus
FBgn0023171	rnh1	92	36.426	ENSGAGG00000009150	RNASEH1	61	36.770	Gopherus_agassizii
FBgn0023171	rnh1	95	37.000	ENSGGOG00000034822	RNASEH1	92	37.000	Gorilla_gorilla
FBgn0023171	rnh1	92	37.586	ENSHBUG00000004666	rnaseh1	87	37.586	Haplochromis_burtoni
FBgn0023171	rnh1	93	38.095	ENSHGLG00000002585	Rnaseh1	83	38.095	Heterocephalus_glaber_female
FBgn0023171	rnh1	93	38.095	ENSHGLG00100005105	Rnaseh1	83	38.095	Heterocephalus_glaber_male
FBgn0023171	rnh1	94	39.116	ENSHCOG00000012329	rnaseh1	89	39.262	Hippocampus_comes
FBgn0023171	rnh1	92	37.500	ENSIPUG00000023060	rnaseh1	96	37.500	Ictalurus_punctatus
FBgn0023171	rnh1	92	37.370	ENSSTOG00000012774	RNASEH1	90	37.370	Ictidomys_tridecemlineatus
FBgn0023171	rnh1	92	36.332	ENSJJAG00000021481	-	88	36.332	Jaculus_jaculus
FBgn0023171	rnh1	83	38.168	ENSJJAG00000020238	Rnaseh1	89	38.168	Jaculus_jaculus
FBgn0023171	rnh1	95	31.250	ENSJJAG00000008994	-	96	31.250	Jaculus_jaculus
FBgn0023171	rnh1	92	38.621	ENSKMAG00000001373	rnaseh1	88	38.621	Kryptolebias_marmoratus
FBgn0023171	rnh1	93	37.201	ENSLBEG00000004480	rnaseh1	96	36.519	Labrus_bergylta
FBgn0023171	rnh1	92	37.415	ENSLACG00000007100	RNASEH1	88	36.897	Latimeria_chalumnae
FBgn0023171	rnh1	92	37.075	ENSLOCG00000017212	rnaseh1	96	39.590	Lepisosteus_oculatus
FBgn0023171	rnh1	92	37.931	ENSLAFG00000015091	RNASEH1	89	37.931	Loxodonta_africana
FBgn0023171	rnh1	92	34.256	ENSMFAG00000002323	-	88	34.256	Macaca_fascicularis
FBgn0023171	rnh1	92	36.552	ENSMFAG00000000063	-	89	36.552	Macaca_fascicularis
FBgn0023171	rnh1	92	34.602	ENSMMUG00000019280	-	88	34.602	Macaca_mulatta
FBgn0023171	rnh1	92	36.552	ENSMNEG00000040183	-	89	36.552	Macaca_nemestrina
FBgn0023171	rnh1	92	34.602	ENSMNEG00000029676	-	88	34.602	Macaca_nemestrina
FBgn0023171	rnh1	92	35.986	ENSMLEG00000028662	-	88	35.986	Mandrillus_leucophaeus
FBgn0023171	rnh1	87	35.531	ENSMLEG00000039352	-	98	35.531	Mandrillus_leucophaeus
FBgn0023171	rnh1	93	37.864	ENSMAMG00000019725	rnaseh1	93	37.864	Mastacembelus_armatus
FBgn0023171	rnh1	92	37.586	ENSMZEG00005013006	rnaseh1	87	37.586	Maylandia_zebra
FBgn0023171	rnh1	85	35.955	ENSMGAG00000013979	RNASEH1	99	35.955	Meleagris_gallopavo
FBgn0023171	rnh1	92	39.310	ENSMAUG00000014957	Rnaseh1	89	39.310	Mesocricetus_auratus
FBgn0023171	rnh1	92	37.370	ENSMICG00000033156	RNASEH1	88	37.370	Microcebus_murinus
FBgn0023171	rnh1	92	38.144	ENSMOCG00000015522	Rnaseh1	89	38.144	Microtus_ochrogaster
FBgn0023171	rnh1	92	37.716	ENSMMOG00000015902	rnaseh1	87	37.024	Mola_mola
FBgn0023171	rnh1	55	40.230	ENSMODG00000028814	-	76	38.144	Monodelphis_domestica
FBgn0023171	rnh1	92	37.024	ENSMODG00000014491	-	88	37.024	Monodelphis_domestica
FBgn0023171	rnh1	92	38.621	ENSMALG00000010565	rnaseh1	87	38.621	Monopterus_albus
FBgn0023171	rnh1	92	38.832	MGP_CAROLIEiJ_G0017660	Rnaseh1	89	38.832	Mus_caroli
FBgn0023171	rnh1	92	38.832	ENSMUSG00000020630	Rnaseh1	89	38.832	Mus_musculus
FBgn0023171	rnh1	95	37.584	MGP_PahariEiJ_G0029418	Rnaseh1	91	38.926	Mus_pahari
FBgn0023171	rnh1	92	38.488	MGP_SPRETEiJ_G0018502	Rnaseh1	89	38.488	Mus_spretus
FBgn0023171	rnh1	60	43.386	ENSMPUG00000012984	RNASEH1	89	43.386	Mustela_putorius_furo
FBgn0023171	rnh1	92	38.062	ENSNGAG00000015966	Rnaseh1	84	38.062	Nannospalax_galili
FBgn0023171	rnh1	92	38.276	ENSNBRG00000008739	rnaseh1	87	38.276	Neolamprologus_brichardi
FBgn0023171	rnh1	95	31.104	ENSNLEG00000015400	RNASEH1	91	31.104	Nomascus_leucogenys
FBgn0023171	rnh1	83	34.733	ENSNLEG00000000059	-	86	34.733	Nomascus_leucogenys
FBgn0023171	rnh1	92	40.000	ENSOPRG00000005072	RNASEH1	89	40.000	Ochotona_princeps
FBgn0023171	rnh1	97	36.538	ENSODEG00000000235	Rnaseh1	93	36.538	Octodon_degus
FBgn0023171	rnh1	92	38.276	ENSONIG00000018697	rnaseh1	96	38.276	Oreochromis_niloticus
FBgn0023171	rnh1	92	37.801	ENSOCUG00000006117	RNASEH1	89	37.801	Oryctolagus_cuniculus
FBgn0023171	rnh1	92	38.225	ENSORLG00000018127	rnaseh1	94	40.206	Oryzias_latipes
FBgn0023171	rnh1	92	38.225	ENSORLG00020013660	rnaseh1	87	39.863	Oryzias_latipes_hni
FBgn0023171	rnh1	92	39.249	ENSORLG00015011338	rnaseh1	87	39.249	Oryzias_latipes_hsok
FBgn0023171	rnh1	84	38.258	ENSOMEG00000004710	rnaseh1	89	38.258	Oryzias_melastigma
FBgn0023171	rnh1	92	38.832	ENSOGAG00000017176	RNASEH1	89	38.832	Otolemur_garnettii
FBgn0023171	rnh1	92	31.879	ENSOARG00000005386	RNASEH1	89	31.879	Ovis_aries
FBgn0023171	rnh1	97	35.621	ENSPPAG00000034221	RNASEH1	95	35.621	Pan_paniscus
FBgn0023171	rnh1	92	37.457	ENSPPRG00000015513	RNASEH1	88	37.457	Panthera_pardus
FBgn0023171	rnh1	87	35.165	ENSPTIG00000019034	RNASEH1	83	35.165	Panthera_tigris_altaica
FBgn0023171	rnh1	83	35.878	ENSPTRG00000043403	-	87	35.878	Pan_troglodytes
FBgn0023171	rnh1	97	35.621	ENSPTRG00000011614	RNASEH1	95	35.621	Pan_troglodytes
FBgn0023171	rnh1	92	35.862	ENSPANG00000000443	RNASEH1	97	34.909	Papio_anubis
FBgn0023171	rnh1	95	33.779	ENSPANG00000018246	-	92	33.779	Papio_anubis
FBgn0023171	rnh1	93	37.217	ENSPKIG00000003146	rnaseh1	97	38.621	Paramormyrops_kingsleyae
FBgn0023171	rnh1	93	37.755	ENSPSIG00000002937	RNASEH1	99	37.755	Pelodiscus_sinensis
FBgn0023171	rnh1	92	34.602	ENSPMGG00000017463	rnaseh1	92	32.653	Periophthalmus_magnuspinnatus
FBgn0023171	rnh1	92	39.446	ENSPEMG00000022465	-	89	39.100	Peromyscus_maniculatus_bairdii
FBgn0023171	rnh1	92	34.602	ENSPCIG00000023334	-	88	34.602	Phascolarctos_cinereus
FBgn0023171	rnh1	94	38.776	ENSPFOG00000002841	rnaseh1	91	38.776	Poecilia_formosa
FBgn0023171	rnh1	64	33.645	ENSPLAG00000021349	-	65	34.536	Poecilia_latipinna
FBgn0023171	rnh1	94	39.796	ENSPMEG00000016826	rnaseh1	91	39.796	Poecilia_mexicana
FBgn0023171	rnh1	94	39.731	ENSPREG00000012197	rnaseh1	91	39.731	Poecilia_reticulata
FBgn0023171	rnh1	59	44.737	ENSPPYG00000025873	RNASEH1	71	44.737	Pongo_abelii
FBgn0023171	rnh1	86	36.059	ENSPPYG00000008067	-	90	36.059	Pongo_abelii
FBgn0023171	rnh1	92	37.586	ENSPCAG00000002500	RNASEH1	89	37.586	Procavia_capensis
FBgn0023171	rnh1	92	34.948	ENSPCOG00000019444	RNASEH1	88	34.948	Propithecus_coquereli
FBgn0023171	rnh1	92	38.488	ENSPVAG00000002070	RNASEH1	89	38.488	Pteropus_vampyrus
FBgn0023171	rnh1	92	37.241	ENSPNYG00000001292	rnaseh1	87	37.241	Pundamilia_nyererei
FBgn0023171	rnh1	92	38.966	ENSPNAG00000022344	rnaseh1	89	38.966	Pygocentrus_nattereri
FBgn0023171	rnh1	95	38.384	ENSRNOG00000008584	Rnaseh1	91	39.057	Rattus_norvegicus
FBgn0023171	rnh1	92	36.678	ENSRBIG00000034222	RNASEH1	88	36.678	Rhinopithecus_bieti
FBgn0023171	rnh1	92	35.640	ENSRROG00000041761	RNASEH1	88	35.640	Rhinopithecus_roxellana
FBgn0023171	rnh1	56	47.727	YMR234W	-	58	47.727	Saccharomyces_cerevisiae
FBgn0023171	rnh1	95	34.983	ENSSBOG00000025411	RNASEH1	92	34.983	Saimiri_boliviensis_boliviensis
FBgn0023171	rnh1	92	36.860	ENSSHAG00000013051	RNASEH1	87	36.860	Sarcophilus_harrisii
FBgn0023171	rnh1	93	35.759	ENSSFOG00015002709	rnaseh1	82	46.203	Scleropages_formosus
FBgn0023171	rnh1	92	37.457	ENSSMAG00000007586	rnaseh1	86	37.457	Scophthalmus_maximus
FBgn0023171	rnh1	94	36.949	ENSSDUG00000008217	rnaseh1	95	37.288	Seriola_dumerili
FBgn0023171	rnh1	96	34.295	ENSSLDG00000000442	rnaseh1	95	37.500	Seriola_lalandi_dorsalis
FBgn0023171	rnh1	95	46.032	ENSSPUG00000006644	RNASEH1	96	34.641	Sphenodon_punctatus
FBgn0023171	rnh1	93	34.304	ENSSPAG00000009353	rnaseh1	87	35.959	Stegastes_partitus
FBgn0023171	rnh1	94	36.949	ENSSSCG00000025305	RNASEH1	90	36.949	Sus_scrofa
FBgn0023171	rnh1	94	36.395	ENSTGUG00000012980	RNASEH1	93	37.415	Taeniopygia_guttata
FBgn0023171	rnh1	92	40.138	ENSTRUG00000015774	rnaseh1	94	40.138	Takifugu_rubripes
FBgn0023171	rnh1	92	38.621	ENSTNIG00000010715	rnaseh1	95	38.621	Tetraodon_nigroviridis
FBgn0023171	rnh1	94	35.374	ENSTTRG00000001615	RNASEH1	90	35.374	Tursiops_truncatus
FBgn0023171	rnh1	50	46.497	ENSUAMG00000018254	RNASEH1	80	46.497	Ursus_americanus
FBgn0023171	rnh1	74	33.603	ENSUMAG00000003941	RNASEH1	64	35.526	Ursus_maritimus
FBgn0023171	rnh1	92	32.302	ENSVPAG00000011589	RNASEH1	88	32.302	Vicugna_pacos
FBgn0023171	rnh1	92	38.754	ENSVVUG00000008633	RNASEH1	79	38.754	Vulpes_vulpes
FBgn0023171	rnh1	63	45.775	ENSXETG00000030371	-	96	45.775	Xenopus_tropicalis
FBgn0023171	rnh1	92	40.273	ENSXETG00000001212	rnaseh1	96	47.183	Xenopus_tropicalis
FBgn0023171	rnh1	92	39.655	ENSXMAG00000002357	rnaseh1	89	39.655	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000287	magnesium ion binding	-	IEA	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0004523	RNA-DNA hybrid ribonuclease activity	21873635.	IBA	Function
GO:0004523	RNA-DNA hybrid ribonuclease activity	9398656.	IDA	Function
GO:0043137	DNA replication, removal of RNA primer	21873635.	IBA	Process
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	21873635.	IBA	Process