EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0023519 (Gene tree)
Gene ID: 31150
Gene Symbol: mRpL16
Alias: -
Full Name: mitochondrial ribosomal protein L16
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 1227 bases
Position: chrX:1890256-1891482
Accession: FBgn0023519
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0070301	Ribosomal_L16	PF00252.18	1.4e-31	1	1
FBpp0304831	Ribosomal_L16	PF00252.18	1.4e-31	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0332579	-	1076	-	FBpp0304831	243 (aa)	-	O46082
FBtr0070314	-	869	-	FBpp0070301	243 (aa)	-	Q9W547

Gene Model

Click here to download FBgn0023519's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0023519's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0023519	mRpL16	99	47.303	ENSG00000166902	MRPL16	98	69.048	Homo_sapiens
FBgn0023519	mRpL16	88	46.948	ENSAPOG00000003818	mrpl16	81	46.948	Acanthochromis_polyacanthus
FBgn0023519	mRpL16	87	53.081	ENSAMEG00000014289	MRPL16	83	53.081	Ailuropoda_melanoleuca
FBgn0023519	mRpL16	90	49.772	ENSACIG00000022204	mrpl16	84	49.772	Amphilophus_citrinellus
FBgn0023519	mRpL16	88	48.826	ENSAOCG00000002647	mrpl16	81	48.826	Amphiprion_ocellaris
FBgn0023519	mRpL16	88	48.826	ENSAPEG00000020339	mrpl16	81	48.826	Amphiprion_percula
FBgn0023519	mRpL16	87	48.815	ENSATEG00000012565	mrpl16	81	48.815	Anabas_testudineus
FBgn0023519	mRpL16	90	52.294	ENSACAG00000009952	MRPL16	85	52.294	Anolis_carolinensis
FBgn0023519	mRpL16	97	47.660	ENSANAG00000029141	MRPL16	92	47.660	Aotus_nancymaae
FBgn0023519	mRpL16	81	50.510	ENSACLG00000024282	mrpl16	83	50.777	Astatotilapia_calliptera
FBgn0023519	mRpL16	87	49.289	ENSAMXG00000014688	mrpl16	86	49.289	Astyanax_mexicanus
FBgn0023519	mRpL16	97	48.511	ENSBTAG00000021188	MRPL16	92	48.511	Bos_taurus
FBgn0023519	mRpL16	90	37.387	WBGene00011412	mrpl-16	92	37.387	Caenorhabditis_elegans
FBgn0023519	mRpL16	99	47.303	ENSCJAG00000016306	MRPL16	95	47.303	Callithrix_jacchus
FBgn0023519	mRpL16	89	52.074	ENSCAFG00000031711	-	85	52.074	Canis_familiaris
FBgn0023519	mRpL16	89	52.074	ENSCAFG00000029686	-	85	52.074	Canis_familiaris
FBgn0023519	mRpL16	89	52.074	ENSCAFG00020000230	MRPL16	85	52.074	Canis_lupus_dingo
FBgn0023519	mRpL16	96	48.927	ENSCHIG00000012712	MRPL16	92	48.927	Capra_hircus
FBgn0023519	mRpL16	97	49.362	ENSTSYG00000013336	MRPL16	92	49.362	Carlito_syrichta
FBgn0023519	mRpL16	99	47.718	ENSCPOG00000005035	MRPL16	95	47.718	Cavia_porcellus
FBgn0023519	mRpL16	97	48.085	ENSCCAG00000035372	MRPL16	92	48.085	Cebus_capucinus
FBgn0023519	mRpL16	90	51.376	ENSCATG00000035790	MRPL16	86	51.376	Cercocebus_atys
FBgn0023519	mRpL16	86	52.153	ENSCLAG00000003811	MRPL16	87	51.628	Chinchilla_lanigera
FBgn0023519	mRpL16	90	51.835	ENSCSAG00000006107	MRPL16	86	51.835	Chlorocebus_sabaeus
FBgn0023519	mRpL16	60	58.503	ENSCHOG00000009976	MRPL16	72	58.503	Choloepus_hoffmanni
FBgn0023519	mRpL16	88	50.698	ENSCPBG00000009578	MRPL16	85	50.698	Chrysemys_picta_bellii
FBgn0023519	mRpL16	74	37.989	ENSCING00000020946	-	98	39.891	Ciona_intestinalis
FBgn0023519	mRpL16	99	48.133	ENSCANG00000027375	MRPL16	95	48.133	Colobus_angolensis_palliatus
FBgn0023519	mRpL16	93	46.903	ENSCGRG00001000785	Mrpl16	89	46.903	Cricetulus_griseus_chok1gshd
FBgn0023519	mRpL16	81	50.510	ENSCGRG00000015073	Mrpl16	92	50.510	Cricetulus_griseus_crigri
FBgn0023519	mRpL16	90	46.575	ENSCSEG00000006169	mrpl16	84	46.575	Cynoglossus_semilaevis
FBgn0023519	mRpL16	88	48.826	ENSCVAG00000014885	mrpl16	82	48.826	Cyprinodon_variegatus
FBgn0023519	mRpL16	88	48.826	ENSCVAG00000013739	mrpl16	82	48.826	Cyprinodon_variegatus
FBgn0023519	mRpL16	90	45.413	ENSDARG00000075325	mrpl16	95	45.116	Danio_rerio
FBgn0023519	mRpL16	96	48.927	ENSDNOG00000034262	-	92	48.927	Dasypus_novemcinctus
FBgn0023519	mRpL16	67	39.634	ENSDNOG00000041871	-	80	39.634	Dasypus_novemcinctus
FBgn0023519	mRpL16	88	51.628	ENSDORG00000024946	Mrpl16	84	51.628	Dipodomys_ordii
FBgn0023519	mRpL16	59	61.806	ENSETEG00000011252	MRPL16	57	61.806	Echinops_telfairi
FBgn0023519	mRpL16	90	47.248	ENSEBUG00000001257	mrpl16	83	47.248	Eptatretus_burgeri
FBgn0023519	mRpL16	99	48.548	ENSEASG00005007994	MRPL16	95	48.548	Equus_asinus_asinus
FBgn0023519	mRpL16	99	48.133	ENSECAG00000014926	MRPL16	95	48.133	Equus_caballus
FBgn0023519	mRpL16	94	51.316	ENSEEUG00000011076	MRPL16	90	51.316	Erinaceus_europaeus
FBgn0023519	mRpL16	95	46.522	ENSELUG00000002608	mrpl16	87	46.522	Esox_lucius
FBgn0023519	mRpL16	96	49.356	ENSFCAG00000007540	MRPL16	92	49.356	Felis_catus
FBgn0023519	mRpL16	84	48.529	ENSFALG00000012123	MRPL16	93	49.500	Ficedula_albicollis
FBgn0023519	mRpL16	91	50.450	ENSFDAG00000012285	MRPL16	94	50.450	Fukomys_damarensis
FBgn0023519	mRpL16	89	48.387	ENSFHEG00000015359	mrpl16	81	48.387	Fundulus_heteroclitus
FBgn0023519	mRpL16	74	49.162	ENSGMOG00000008546	mrpl16	90	49.162	Gadus_morhua
FBgn0023519	mRpL16	79	52.083	ENSGALG00000029419	MRPL16	95	52.083	Gallus_gallus
FBgn0023519	mRpL16	88	49.296	ENSGAFG00000012264	mrpl16	81	49.765	Gambusia_affinis
FBgn0023519	mRpL16	88	47.442	ENSGACG00000015363	mrpl16	82	47.442	Gasterosteus_aculeatus
FBgn0023519	mRpL16	88	50.698	ENSGAGG00000023594	MRPL16	85	50.698	Gopherus_agassizii
FBgn0023519	mRpL16	99	47.718	ENSGGOG00000015703	MRPL16	95	47.718	Gorilla_gorilla
FBgn0023519	mRpL16	88	50.235	ENSHBUG00000001596	mrpl16	81	50.235	Haplochromis_burtoni
FBgn0023519	mRpL16	99	46.058	ENSHGLG00000010777	MRPL16	95	46.058	Heterocephalus_glaber_female
FBgn0023519	mRpL16	99	46.058	ENSHGLG00100010477	MRPL16	95	46.058	Heterocephalus_glaber_male
FBgn0023519	mRpL16	90	50.228	ENSHCOG00000003499	mrpl16	86	49.510	Hippocampus_comes
FBgn0023519	mRpL16	91	48.636	ENSIPUG00000009966	mrpl16	84	48.636	Ictalurus_punctatus
FBgn0023519	mRpL16	96	48.498	ENSSTOG00000021462	MRPL16	92	48.498	Ictidomys_tridecemlineatus
FBgn0023519	mRpL16	96	48.498	ENSJJAG00000018928	Mrpl16	92	48.498	Jaculus_jaculus
FBgn0023519	mRpL16	87	47.867	ENSKMAG00000022035	mrpl16	83	47.867	Kryptolebias_marmoratus
FBgn0023519	mRpL16	92	47.534	ENSLBEG00000013193	mrpl16	86	47.534	Labrus_bergylta
FBgn0023519	mRpL16	89	55.093	ENSLACG00000002060	MRPL16	85	55.093	Latimeria_chalumnae
FBgn0023519	mRpL16	98	47.325	ENSLOCG00000010979	mrpl16	94	47.325	Lepisosteus_oculatus
FBgn0023519	mRpL16	98	46.639	ENSLAFG00000001490	MRPL16	94	46.639	Loxodonta_africana
FBgn0023519	mRpL16	99	47.718	ENSMFAG00000002379	MRPL16	95	47.718	Macaca_fascicularis
FBgn0023519	mRpL16	99	47.718	ENSMMUG00000022321	MRPL16	95	47.718	Macaca_mulatta
FBgn0023519	mRpL16	99	48.548	ENSMNEG00000040325	MRPL16	95	48.548	Macaca_nemestrina
FBgn0023519	mRpL16	86	51.442	ENSMLEG00000033890	MRPL16	90	51.442	Mandrillus_leucophaeus
FBgn0023519	mRpL16	90	49.772	ENSMAMG00000003085	mrpl16	88	51.724	Mastacembelus_armatus
FBgn0023519	mRpL16	88	49.765	ENSMZEG00005000716	mrpl16	81	49.765	Maylandia_zebra
FBgn0023519	mRpL16	91	50.450	ENSMGAG00000003328	MRPL16	86	50.450	Meleagris_gallopavo
FBgn0023519	mRpL16	88	50.233	ENSMAUG00000011181	Mrpl16	84	50.233	Mesocricetus_auratus
FBgn0023519	mRpL16	97	49.362	ENSMICG00000011027	MRPL16	92	49.362	Microcebus_murinus
FBgn0023519	mRpL16	96	47.436	ENSMOCG00000003604	Mrpl16	92	47.436	Microtus_ochrogaster
FBgn0023519	mRpL16	88	48.826	ENSMMOG00000018112	mrpl16	81	48.826	Mola_mola
FBgn0023519	mRpL16	87	50.711	ENSMODG00000020205	MRPL16	83	50.711	Monodelphis_domestica
FBgn0023519	mRpL16	88	51.643	ENSMALG00000016263	mrpl16	83	51.643	Monopterus_albus
FBgn0023519	mRpL16	94	46.930	MGP_CAROLIEiJ_G0022733	Mrpl16	90	46.930	Mus_caroli
FBgn0023519	mRpL16	96	46.581	ENSMUSG00000024683	Mrpl16	92	46.581	Mus_musculus
FBgn0023519	mRpL16	94	46.930	MGP_PahariEiJ_G0014227	Mrpl16	90	46.930	Mus_pahari
FBgn0023519	mRpL16	96	46.581	MGP_SPRETEiJ_G0023648	Mrpl16	92	46.581	Mus_spretus
FBgn0023519	mRpL16	90	52.752	ENSMPUG00000014583	MRPL16	86	52.752	Mustela_putorius_furo
FBgn0023519	mRpL16	90	45.909	ENSMLUG00000027025	-	86	45.909	Myotis_lucifugus
FBgn0023519	mRpL16	97	51.064	ENSMLUG00000011224	-	92	51.064	Myotis_lucifugus
FBgn0023519	mRpL16	97	48.085	ENSNGAG00000010636	Mrpl16	92	48.085	Nannospalax_galili
FBgn0023519	mRpL16	88	50.235	ENSNBRG00000017868	mrpl16	81	50.235	Neolamprologus_brichardi
FBgn0023519	mRpL16	99	48.548	ENSNLEG00000013137	MRPL16	95	48.548	Nomascus_leucogenys
FBgn0023519	mRpL16	84	49.261	ENSMEUG00000016437	MRPL16	95	49.261	Notamacropus_eugenii
FBgn0023519	mRpL16	86	52.857	ENSOPRG00000014638	-	82	52.857	Ochotona_princeps
FBgn0023519	mRpL16	91	50.909	ENSODEG00000001664	MRPL16	86	50.909	Octodon_degus
FBgn0023519	mRpL16	88	50.235	ENSONIG00000003122	mrpl16	81	50.235	Oreochromis_niloticus
FBgn0023519	mRpL16	99	48.133	ENSOCUG00000013390	MRPL16	95	48.133	Oryctolagus_cuniculus
FBgn0023519	mRpL16	87	49.763	ENSORLG00000026229	mrpl16	81	49.763	Oryzias_latipes
FBgn0023519	mRpL16	88	49.296	ENSORLG00020016055	mrpl16	61	49.296	Oryzias_latipes_hni
FBgn0023519	mRpL16	88	49.765	ENSORLG00015014562	mrpl16	77	49.765	Oryzias_latipes_hsok
FBgn0023519	mRpL16	87	50.237	ENSOMEG00000016848	mrpl16	81	50.237	Oryzias_melastigma
FBgn0023519	mRpL16	99	48.133	ENSOGAG00000001486	MRPL16	95	48.133	Otolemur_garnettii
FBgn0023519	mRpL16	89	51.152	ENSOARG00000012266	MRPL16	85	51.152	Ovis_aries
FBgn0023519	mRpL16	99	47.303	ENSPPAG00000038990	MRPL16	95	47.303	Pan_paniscus
FBgn0023519	mRpL16	97	48.936	ENSPPRG00000013233	MRPL16	92	48.936	Panthera_pardus
FBgn0023519	mRpL16	90	51.376	ENSPTIG00000014818	MRPL16	86	51.376	Panthera_tigris_altaica
FBgn0023519	mRpL16	99	47.303	ENSPTRG00000003700	MRPL16	95	47.303	Pan_troglodytes
FBgn0023519	mRpL16	97	48.511	ENSPANG00000010272	MRPL16	92	48.511	Papio_anubis
FBgn0023519	mRpL16	97	44.583	ENSPKIG00000010334	mrpl16	93	44.583	Paramormyrops_kingsleyae
FBgn0023519	mRpL16	91	51.351	ENSPSIG00000016182	MRPL16	89	51.351	Pelodiscus_sinensis
FBgn0023519	mRpL16	92	49.107	ENSPMGG00000001444	mrpl16	87	48.458	Periophthalmus_magnuspinnatus
FBgn0023519	mRpL16	93	48.230	ENSPEMG00000001887	Mrpl16	89	48.230	Peromyscus_maniculatus_bairdii
FBgn0023519	mRpL16	90	48.165	ENSPMAG00000001603	mrpl16	81	48.165	Petromyzon_marinus
FBgn0023519	mRpL16	90	47.706	ENSPCIG00000009443	MRPL16	86	47.706	Phascolarctos_cinereus
FBgn0023519	mRpL16	90	50.685	ENSPFOG00000009144	mrpl16	84	50.685	Poecilia_formosa
FBgn0023519	mRpL16	90	50.685	ENSPLAG00000010811	mrpl16	84	50.685	Poecilia_latipinna
FBgn0023519	mRpL16	90	50.685	ENSPMEG00000023095	mrpl16	84	50.685	Poecilia_mexicana
FBgn0023519	mRpL16	90	50.228	ENSPREG00000021826	mrpl16	92	50.228	Poecilia_reticulata
FBgn0023519	mRpL16	99	46.888	ENSPPYG00000003227	MRPL16	95	46.888	Pongo_abelii
FBgn0023519	mRpL16	87	52.607	ENSPCAG00000008055	MRPL16	83	52.607	Procavia_capensis
FBgn0023519	mRpL16	97	48.936	ENSPCOG00000025205	MRPL16	92	48.936	Propithecus_coquereli
FBgn0023519	mRpL16	96	49.573	ENSPVAG00000012250	MRPL16	92	49.573	Pteropus_vampyrus
FBgn0023519	mRpL16	88	49.765	ENSPNYG00000003647	mrpl16	81	49.765	Pundamilia_nyererei
FBgn0023519	mRpL16	91	45.909	ENSPNAG00000010473	mrpl16	85	45.909	Pygocentrus_nattereri
FBgn0023519	mRpL16	94	47.807	ENSRNOG00000021005	Mrpl16	90	47.807	Rattus_norvegicus
FBgn0023519	mRpL16	90	51.835	ENSRBIG00000018289	MRPL16	86	51.835	Rhinopithecus_bieti
FBgn0023519	mRpL16	90	52.294	ENSRROG00000040273	MRPL16	86	52.294	Rhinopithecus_roxellana
FBgn0023519	mRpL16	90	50.459	ENSSBOG00000005353	MRPL16	89	51.471	Saimiri_boliviensis_boliviensis
FBgn0023519	mRpL16	90	48.624	ENSSHAG00000006665	MRPL16	86	48.624	Sarcophilus_harrisii
FBgn0023519	mRpL16	95	46.320	ENSSFOG00015008725	mrpl16	86	47.826	Scleropages_formosus
FBgn0023519	mRpL16	88	48.357	ENSSMAG00000021324	mrpl16	86	48.357	Scophthalmus_maximus
FBgn0023519	mRpL16	88	48.826	ENSSDUG00000006482	mrpl16	81	48.826	Seriola_dumerili
FBgn0023519	mRpL16	88	48.826	ENSSLDG00000000994	mrpl16	81	48.826	Seriola_lalandi_dorsalis
FBgn0023519	mRpL16	84	54.187	ENSSARG00000004666	MRPL16	95	54.187	Sorex_araneus
FBgn0023519	mRpL16	96	49.356	ENSSPUG00000018047	MRPL16	92	49.356	Sphenodon_punctatus
FBgn0023519	mRpL16	90	48.402	ENSSPAG00000017237	mrpl16	84	48.402	Stegastes_partitus
FBgn0023519	mRpL16	99	48.548	ENSSSCG00000013118	MRPL16	95	48.548	Sus_scrofa
FBgn0023519	mRpL16	57	50.000	ENSTGUG00000006277	MRPL16	93	50.000	Taeniopygia_guttata
FBgn0023519	mRpL16	87	44.076	ENSTRUG00000017231	mrpl16	80	44.076	Takifugu_rubripes
FBgn0023519	mRpL16	89	50.000	ENSTNIG00000009438	mrpl16	84	50.000	Tetraodon_nigroviridis
FBgn0023519	mRpL16	97	48.511	ENSTBEG00000007959	MRPL16	92	48.511	Tupaia_belangeri
FBgn0023519	mRpL16	87	52.607	ENSTTRG00000009428	MRPL16	83	52.607	Tursiops_truncatus
FBgn0023519	mRpL16	96	49.573	ENSUAMG00000009824	MRPL16	89	53.769	Ursus_americanus
FBgn0023519	mRpL16	87	53.081	ENSUMAG00000018814	MRPL16	92	52.427	Ursus_maritimus
FBgn0023519	mRpL16	89	52.074	ENSVVUG00000026682	MRPL16	88	52.074	Vulpes_vulpes
FBgn0023519	mRpL16	87	45.972	ENSXETG00000024210	mrpl16	82	45.972	Xenopus_tropicalis
FBgn0023519	mRpL16	88	48.826	ENSXCOG00000002880	mrpl16	84	50.235	Xiphophorus_couchianus
FBgn0023519	mRpL16	88	49.765	ENSXMAG00000019187	mrpl16	81	50.235	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	11279069.	ISS	Function
GO:0003735	structural constituent of ribosome	17927810.	TAS	Function
GO:0005762	mitochondrial large ribosomal subunit	21873635.	IBA	Component
GO:0005762	mitochondrial large ribosomal subunit	11279069.	ISS	Component
GO:0005762	mitochondrial large ribosomal subunit	17927810.	TAS	Component
GO:0006412	translation	11279069.	ISS	Process
GO:0019843	rRNA binding	21873635.	IBA	Function
GO:0032543	mitochondrial translation	21873635.	IBA	Process
GO:0032543	mitochondrial translation	17927810.	TAS	Process