EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0023542 (Gene tree)
Gene ID: 31195
Gene Symbol: Nmd3
Alias: -
Full Name: Nonsense-mediated mRNA 3
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 1851 bases
Position: chrX:2182818-2184668
Accession: FBgn0023542
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0070409	NMD3	PF04981.13	5.8e-79	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0070425	-	1791	-	FBpp0070409	521 (aa)	-	O46050

Gene Model

Click here to download FBgn0023542's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0023542's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0023542	Nmd3	94	53.347	ENSG00000169251	NMD3	93	65.025	Homo_sapiens
FBgn0023542	Nmd3	95	55.110	ENSAPOG00000022912	nmd3	98	55.311	Acanthochromis_polyacanthus
FBgn0023542	Nmd3	94	54.065	ENSAMEG00000001584	NMD3	96	54.065	Ailuropoda_melanoleuca
FBgn0023542	Nmd3	95	50.701	ENSACIG00000015196	nmd3	98	50.701	Amphilophus_citrinellus
FBgn0023542	Nmd3	95	55.110	ENSAOCG00000009086	nmd3	98	55.311	Amphiprion_ocellaris
FBgn0023542	Nmd3	95	55.110	ENSAPEG00000000329	nmd3	98	55.311	Amphiprion_percula
FBgn0023542	Nmd3	95	54.709	ENSATEG00000014351	nmd3	98	54.910	Anabas_testudineus
FBgn0023542	Nmd3	97	53.740	ENSAPLG00000014786	NMD3	99	53.740	Anas_platyrhynchos
FBgn0023542	Nmd3	96	55.289	ENSACAG00000007349	NMD3	98	55.289	Anolis_carolinensis
FBgn0023542	Nmd3	94	53.564	ENSANAG00000026434	NMD3	97	53.564	Aotus_nancymaae
FBgn0023542	Nmd3	95	53.507	ENSACLG00000015520	nmd3	98	53.707	Astatotilapia_calliptera
FBgn0023542	Nmd3	95	53.908	ENSAMXG00000014415	nmd3	98	54.108	Astyanax_mexicanus
FBgn0023542	Nmd3	94	53.157	ENSBTAG00000016228	NMD3	96	53.157	Bos_taurus
FBgn0023542	Nmd3	95	47.316	WBGene00012030	T25G3.3	97	47.316	Caenorhabditis_elegans
FBgn0023542	Nmd3	94	53.564	ENSCJAG00000002900	NMD3	95	53.673	Callithrix_jacchus
FBgn0023542	Nmd3	96	52.579	ENSCAFG00000014352	NMD3	96	52.579	Canis_familiaris
FBgn0023542	Nmd3	96	52.673	ENSCAFG00020021145	NMD3	98	52.673	Canis_lupus_dingo
FBgn0023542	Nmd3	94	52.953	ENSCHIG00000016015	NMD3	96	52.953	Capra_hircus
FBgn0023542	Nmd3	95	52.918	ENSTSYG00000002155	NMD3	97	52.918	Carlito_syrichta
FBgn0023542	Nmd3	76	52.723	ENSCAPG00000017861	NMD3	94	52.723	Cavia_aperea
FBgn0023542	Nmd3	81	54.312	ENSCPOG00000005953	NMD3	92	54.312	Cavia_porcellus
FBgn0023542	Nmd3	94	53.360	ENSCCAG00000037460	NMD3	97	53.347	Cebus_capucinus
FBgn0023542	Nmd3	94	53.955	ENSCATG00000030022	NMD3	97	53.955	Cercocebus_atys
FBgn0023542	Nmd3	94	53.550	ENSCLAG00000003155	NMD3	97	53.550	Chinchilla_lanigera
FBgn0023542	Nmd3	94	53.753	ENSCSAG00000012333	NMD3	97	53.753	Chlorocebus_sabaeus
FBgn0023542	Nmd3	74	47.619	ENSCHOG00000001240	NMD3	76	47.619	Choloepus_hoffmanni
FBgn0023542	Nmd3	95	54.418	ENSCPBG00000018318	NMD3	99	53.992	Chrysemys_picta_bellii
FBgn0023542	Nmd3	96	50.198	ENSCING00000002129	-	99	50.198	Ciona_intestinalis
FBgn0023542	Nmd3	86	49.220	ENSCSAVG00000001120	-	98	49.220	Ciona_savignyi
FBgn0023542	Nmd3	94	49.593	ENSCANG00000042939	NMD3	92	49.593	Colobus_angolensis_palliatus
FBgn0023542	Nmd3	88	45.905	ENSCGRG00001001792	Nmd3	96	45.905	Cricetulus_griseus_chok1gshd
FBgn0023542	Nmd3	94	52.738	ENSCGRG00000007947	Nmd3	98	52.738	Cricetulus_griseus_crigri
FBgn0023542	Nmd3	95	53.414	ENSCSEG00000017954	nmd3	97	53.414	Cynoglossus_semilaevis
FBgn0023542	Nmd3	96	50.902	ENSCVAG00000004672	nmd3	98	51.800	Cyprinodon_variegatus
FBgn0023542	Nmd3	95	54.382	ENSDARG00000015676	nmd3	97	54.980	Danio_rerio
FBgn0023542	Nmd3	94	53.144	ENSDNOG00000045222	NMD3	97	53.144	Dasypus_novemcinctus
FBgn0023542	Nmd3	94	48.980	ENSDORG00000005716	Nmd3	97	55.676	Dipodomys_ordii
FBgn0023542	Nmd3	94	46.653	ENSETEG00000003168	NMD3	96	46.653	Echinops_telfairi
FBgn0023542	Nmd3	85	50.223	ENSEBUG00000014316	nmd3	97	50.223	Eptatretus_burgeri
FBgn0023542	Nmd3	94	53.347	ENSEASG00005018672	NMD3	97	53.347	Equus_asinus_asinus
FBgn0023542	Nmd3	93	53.469	ENSECAG00000000188	NMD3	95	53.469	Equus_caballus
FBgn0023542	Nmd3	91	39.916	ENSEEUG00000010642	-	100	39.916	Erinaceus_europaeus
FBgn0023542	Nmd3	96	53.877	ENSELUG00000024123	nmd3	98	53.877	Esox_lucius
FBgn0023542	Nmd3	94	53.971	ENSFCAG00000022867	NMD3	96	53.971	Felis_catus
FBgn0023542	Nmd3	92	55.509	ENSFALG00000008711	NMD3	100	55.509	Ficedula_albicollis
FBgn0023542	Nmd3	94	53.550	ENSFDAG00000013724	-	96	53.550	Fukomys_damarensis
FBgn0023542	Nmd3	95	46.371	ENSFDAG00000012197	-	98	46.371	Fukomys_damarensis
FBgn0023542	Nmd3	96	53.770	ENSFHEG00000000415	nmd3	99	53.968	Fundulus_heteroclitus
FBgn0023542	Nmd3	94	54.361	ENSGMOG00000009675	nmd3	99	54.361	Gadus_morhua
FBgn0023542	Nmd3	96	55.159	ENSGALG00000009533	NMD3	99	55.159	Gallus_gallus
FBgn0023542	Nmd3	95	54.309	ENSGAFG00000012798	nmd3	95	54.455	Gambusia_affinis
FBgn0023542	Nmd3	95	53.119	ENSGACG00000010028	nmd3	97	53.119	Gasterosteus_aculeatus
FBgn0023542	Nmd3	95	53.815	ENSGAGG00000006556	NMD3	97	53.815	Gopherus_agassizii
FBgn0023542	Nmd3	95	44.444	ENSGGOG00000028590	-	97	44.444	Gorilla_gorilla
FBgn0023542	Nmd3	94	53.347	ENSGGOG00000007157	NMD3	97	53.347	Gorilla_gorilla
FBgn0023542	Nmd3	95	53.507	ENSHBUG00000001781	nmd3	98	53.707	Haplochromis_burtoni
FBgn0023542	Nmd3	95	43.636	ENSHGLG00000010477	-	97	43.636	Heterocephalus_glaber_female
FBgn0023542	Nmd3	94	53.144	ENSHGLG00000014451	-	97	53.144	Heterocephalus_glaber_female
FBgn0023542	Nmd3	95	43.838	ENSHGLG00100001042	-	97	43.838	Heterocephalus_glaber_male
FBgn0023542	Nmd3	94	53.144	ENSHGLG00100006613	-	97	53.144	Heterocephalus_glaber_male
FBgn0023542	Nmd3	98	53.216	ENSHCOG00000004292	nmd3	93	53.216	Hippocampus_comes
FBgn0023542	Nmd3	95	52.104	ENSIPUG00000005073	nmd3	98	52.104	Ictalurus_punctatus
FBgn0023542	Nmd3	94	53.144	ENSSTOG00000001899	NMD3	97	53.144	Ictidomys_tridecemlineatus
FBgn0023542	Nmd3	94	52.439	ENSJJAG00000019759	Nmd3	99	52.439	Jaculus_jaculus
FBgn0023542	Nmd3	95	54.309	ENSKMAG00000020427	nmd3	98	54.509	Kryptolebias_marmoratus
FBgn0023542	Nmd3	96	52.079	ENSLBEG00000022216	nmd3	99	52.079	Labrus_bergylta
FBgn0023542	Nmd3	95	55.263	ENSLACG00000005731	NMD3	95	59.382	Latimeria_chalumnae
FBgn0023542	Nmd3	95	54.000	ENSLOCG00000003561	nmd3	97	54.000	Lepisosteus_oculatus
FBgn0023542	Nmd3	94	52.632	ENSLAFG00000007231	NMD3	97	52.632	Loxodonta_africana
FBgn0023542	Nmd3	94	53.955	ENSMFAG00000040934	NMD3	97	53.955	Macaca_fascicularis
FBgn0023542	Nmd3	94	53.753	ENSMMUG00000009564	NMD3	92	53.753	Macaca_mulatta
FBgn0023542	Nmd3	94	53.955	ENSMNEG00000034626	NMD3	97	53.955	Macaca_nemestrina
FBgn0023542	Nmd3	85	52.125	ENSMLEG00000002741	NMD3	99	52.125	Mandrillus_leucophaeus
FBgn0023542	Nmd3	95	54.108	ENSMAMG00000012427	nmd3	98	54.108	Mastacembelus_armatus
FBgn0023542	Nmd3	95	53.507	ENSMZEG00005016888	nmd3	98	53.707	Maylandia_zebra
FBgn0023542	Nmd3	96	54.365	ENSMGAG00000010498	NMD3	99	54.365	Meleagris_gallopavo
FBgn0023542	Nmd3	94	52.738	ENSMAUG00000000633	Nmd3	97	52.738	Mesocricetus_auratus
FBgn0023542	Nmd3	94	53.455	ENSMICG00000049196	NMD3	96	53.455	Microcebus_murinus
FBgn0023542	Nmd3	95	52.515	ENSMOCG00000005180	Nmd3	98	52.515	Microtus_ochrogaster
FBgn0023542	Nmd3	95	53.200	ENSMMOG00000012765	nmd3	98	53.200	Mola_mola
FBgn0023542	Nmd3	68	62.456	ENSMODG00000016296	NMD3	98	44.981	Monodelphis_domestica
FBgn0023542	Nmd3	95	53.707	ENSMALG00000009256	nmd3	98	53.908	Monopterus_albus
FBgn0023542	Nmd3	94	52.941	MGP_CAROLIEiJ_G0025069	Nmd3	97	52.941	Mus_caroli
FBgn0023542	Nmd3	94	52.941	ENSMUSG00000027787	Nmd3	97	52.941	Mus_musculus
FBgn0023542	Nmd3	94	52.941	MGP_PahariEiJ_G0026512	Nmd3	97	52.941	Mus_pahari
FBgn0023542	Nmd3	94	52.941	MGP_SPRETEiJ_G0026011	Nmd3	97	52.941	Mus_spretus
FBgn0023542	Nmd3	94	53.768	ENSMPUG00000002955	NMD3	96	53.768	Mustela_putorius_furo
FBgn0023542	Nmd3	94	50.505	ENSMLUG00000000701	NMD3	96	50.505	Myotis_lucifugus
FBgn0023542	Nmd3	94	53.455	ENSNGAG00000012307	Nmd3	96	53.455	Nannospalax_galili
FBgn0023542	Nmd3	95	53.307	ENSNBRG00000003324	nmd3	98	53.507	Neolamprologus_brichardi
FBgn0023542	Nmd3	94	53.347	ENSNLEG00000004655	NMD3	97	53.347	Nomascus_leucogenys
FBgn0023542	Nmd3	70	53.509	ENSOPRG00000007690	-	72	53.509	Ochotona_princeps
FBgn0023542	Nmd3	96	53.586	ENSODEG00000006270	NMD3	99	54.065	Octodon_degus
FBgn0023542	Nmd3	95	54.309	ENSONIG00000003643	nmd3	98	54.509	Oreochromis_niloticus
FBgn0023542	Nmd3	93	53.469	ENSOCUG00000017454	NMD3	97	53.469	Oryctolagus_cuniculus
FBgn0023542	Nmd3	95	55.020	ENSORLG00000006279	nmd3	97	55.221	Oryzias_latipes
FBgn0023542	Nmd3	95	55.020	ENSORLG00020003843	nmd3	97	55.221	Oryzias_latipes_hni
FBgn0023542	Nmd3	95	54.418	ENSORLG00015006379	nmd3	97	54.618	Oryzias_latipes_hsok
FBgn0023542	Nmd3	96	54.241	ENSOMEG00000012144	nmd3	99	54.438	Oryzias_melastigma
FBgn0023542	Nmd3	96	53.386	ENSOGAG00000014910	NMD3	98	53.386	Otolemur_garnettii
FBgn0023542	Nmd3	94	52.642	ENSOARG00000001883	NMD3	94	52.642	Ovis_aries
FBgn0023542	Nmd3	94	53.347	ENSPPAG00000043829	NMD3	97	53.347	Pan_paniscus
FBgn0023542	Nmd3	94	53.768	ENSPPRG00000000724	NMD3	95	53.768	Panthera_pardus
FBgn0023542	Nmd3	94	53.753	ENSPTIG00000016761	NMD3	96	53.753	Panthera_tigris_altaica
FBgn0023542	Nmd3	94	53.157	ENSPTRG00000015586	NMD3	97	53.144	Pan_troglodytes
FBgn0023542	Nmd3	94	53.753	ENSPANG00000006665	NMD3	92	53.753	Papio_anubis
FBgn0023542	Nmd3	95	53.200	ENSPKIG00000009928	nmd3	97	53.400	Paramormyrops_kingsleyae
FBgn0023542	Nmd3	96	53.479	ENSPSIG00000007591	NMD3	98	53.479	Pelodiscus_sinensis
FBgn0023542	Nmd3	95	50.302	ENSPMGG00000014015	nmd3	97	50.905	Periophthalmus_magnuspinnatus
FBgn0023542	Nmd3	94	53.144	ENSPEMG00000021880	Nmd3	97	53.144	Peromyscus_maniculatus_bairdii
FBgn0023542	Nmd3	96	54.781	ENSPCIG00000020869	NMD3	99	56.550	Phascolarctos_cinereus
FBgn0023542	Nmd3	95	54.709	ENSPFOG00000012103	nmd3	98	54.910	Poecilia_formosa
FBgn0023542	Nmd3	95	54.709	ENSPLAG00000008087	nmd3	98	54.910	Poecilia_latipinna
FBgn0023542	Nmd3	95	54.709	ENSPMEG00000008506	nmd3	98	54.910	Poecilia_mexicana
FBgn0023542	Nmd3	96	55.090	ENSPREG00000001848	nmd3	98	55.289	Poecilia_reticulata
FBgn0023542	Nmd3	94	53.550	ENSPPYG00000014263	NMD3	97	53.550	Pongo_abelii
FBgn0023542	Nmd3	86	46.993	ENSPCAG00000009851	NMD3	97	46.993	Procavia_capensis
FBgn0023542	Nmd3	79	68.571	ENSPVAG00000003301	NMD3	81	68.571	Pteropus_vampyrus
FBgn0023542	Nmd3	95	53.707	ENSPNYG00000006778	nmd3	98	53.908	Pundamilia_nyererei
FBgn0023542	Nmd3	95	53.386	ENSPNAG00000009442	nmd3	98	53.386	Pygocentrus_nattereri
FBgn0023542	Nmd3	94	52.535	ENSRNOG00000009310	Nmd3	97	52.535	Rattus_norvegicus
FBgn0023542	Nmd3	94	49.797	ENSRBIG00000040379	NMD3	97	49.797	Rhinopithecus_bieti
FBgn0023542	Nmd3	94	53.144	ENSRROG00000036181	NMD3	97	53.144	Rhinopithecus_roxellana
FBgn0023542	Nmd3	95	44.961	YHR170W	NMD3	96	45.155	Saccharomyces_cerevisiae
FBgn0023542	Nmd3	94	53.049	ENSSBOG00000024021	NMD3	97	53.049	Saimiri_boliviensis_boliviensis
FBgn0023542	Nmd3	96	51.587	ENSSHAG00000016044	NMD3	98	51.587	Sarcophilus_harrisii
FBgn0023542	Nmd3	95	53.106	ENSSFOG00015003609	nmd3	98	53.908	Scleropages_formosus
FBgn0023542	Nmd3	96	53.175	ENSSMAG00000012887	nmd3	99	53.175	Scophthalmus_maximus
FBgn0023542	Nmd3	95	54.108	ENSSDUG00000023721	nmd3	98	54.108	Seriola_dumerili
FBgn0023542	Nmd3	95	54.108	ENSSLDG00000006565	nmd3	98	54.108	Seriola_lalandi_dorsalis
FBgn0023542	Nmd3	94	53.252	ENSSARG00000010402	NMD3	99	53.252	Sorex_araneus
FBgn0023542	Nmd3	95	53.707	ENSSPUG00000018791	NMD3	99	53.707	Sphenodon_punctatus
FBgn0023542	Nmd3	95	55.110	ENSSPAG00000014328	nmd3	98	55.311	Stegastes_partitus
FBgn0023542	Nmd3	94	53.768	ENSSSCG00000022952	NMD3	96	53.768	Sus_scrofa
FBgn0023542	Nmd3	97	55.424	ENSTGUG00000011140	-	98	55.424	Taeniopygia_guttata
FBgn0023542	Nmd3	89	54.624	ENSTGUG00000015141	-	99	54.624	Taeniopygia_guttata
FBgn0023542	Nmd3	95	54.016	ENSTRUG00000005958	nmd3	97	54.016	Takifugu_rubripes
FBgn0023542	Nmd3	94	39.959	ENSTBEG00000011783	-	97	39.959	Tupaia_belangeri
FBgn0023542	Nmd3	94	48.880	ENSTTRG00000012938	NMD3	96	48.880	Tursiops_truncatus
FBgn0023542	Nmd3	77	55.087	ENSUAMG00000009305	-	96	55.754	Ursus_americanus
FBgn0023542	Nmd3	94	54.175	ENSUMAG00000011070	NMD3	97	54.082	Ursus_maritimus
FBgn0023542	Nmd3	94	53.768	ENSVPAG00000008779	NMD3	96	53.768	Vicugna_pacos
FBgn0023542	Nmd3	94	53.360	ENSVVUG00000023055	NMD3	97	53.265	Vulpes_vulpes
FBgn0023542	Nmd3	97	53.755	ENSXETG00000027727	nmd3	99	53.755	Xenopus_tropicalis
FBgn0023542	Nmd3	54	73.016	ENSXCOG00000012490	nmd3	87	61.165	Xiphophorus_couchianus
FBgn0023542	Nmd3	96	54.691	ENSXMAG00000018406	nmd3	98	54.890	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000055	ribosomal large subunit export from nucleus	21873635.	IBA	Process
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0043023	ribosomal large subunit binding	21873635.	IBA	Function