EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0024556 (Gene tree)
Gene ID: 44438
Gene Symbol: mEFTu1
Alias: -
Full Name: mitochondrial translation elongation factor Tu 1
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Plus strand
Length: 1776 bases
Position: chr2R:13507557-13509332
Accession: FBgn0024556
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0086790	GTP_EFTU	PF00009.27	6.7e-56	1	1
FBpp0290603	GTP_EFTU	PF00009.27	6.7e-56	1	1
FBpp0086790	GTP_EFTU_D2	PF03144.25	2.5e-16	1	1
FBpp0290603	GTP_EFTU_D2	PF03144.25	2.5e-16	1	1
FBpp0086790	GTP_EFTU_D3	PF03143.17	1.6e-17	1	1
FBpp0290603	GTP_EFTU_D3	PF03143.17	1.6e-17	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27197210	The mRNA-bound proteome of the early fly embryo	IC & embryos	2016 Apr 28	Wessels HH	DOI: 10.1101/gr.200386.115

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0087670	-	1720	-	FBpp0086790	489 (aa)	-	A1Z9E3
FBtr0301389	-	1776	-	FBpp0290603	489 (aa)	-	A1Z9E3

Gene Model

Click here to download FBgn0024556's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0024556's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0024556	mEFTu1	63	33.238	FBgn0284245	eEF1alpha1	75	33.238
FBgn0024556	mEFTu1	86	51.190	FBgn0033184	mEFTu2	90	51.190
FBgn0024556	mEFTu1	79	30.995	FBgn0000557	eEF1alpha2	99	30.638

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0024556	mEFTu1	82	66.915	ENSG00000178952	TUFM	98	62.361	Homo_sapiens
FBgn0024556	mEFTu1	81	70.500	ENSAPOG00000013385	tufm	90	70.500	Acanthochromis_polyacanthus
FBgn0024556	mEFTu1	86	65.647	ENSAMEG00000015551	TUFM	93	65.647	Ailuropoda_melanoleuca
FBgn0024556	mEFTu1	81	70.455	ENSACIG00000007388	tufm	91	70.455	Amphilophus_citrinellus
FBgn0024556	mEFTu1	81	70.750	ENSAOCG00000001032	tufm	93	70.500	Amphiprion_ocellaris
FBgn0024556	mEFTu1	81	70.750	ENSAPEG00000015751	tufm	93	70.500	Amphiprion_percula
FBgn0024556	mEFTu1	91	65.256	ENSATEG00000002905	tufm	97	65.256	Anabas_testudineus
FBgn0024556	mEFTu1	84	70.433	ENSACAG00000005399	TUFM	90	70.433	Anolis_carolinensis
FBgn0024556	mEFTu1	91	62.806	ENSANAG00000022206	TUFM	98	62.806	Aotus_nancymaae
FBgn0024556	mEFTu1	83	70.025	ENSACLG00000007403	tufm	85	70.025	Astatotilapia_calliptera
FBgn0024556	mEFTu1	91	62.138	ENSBTAG00000019216	TUFM	99	62.138	Bos_taurus
FBgn0024556	mEFTu1	82	55.911	WBGene00007000	tufm-1	82	55.911	Caenorhabditis_elegans
FBgn0024556	mEFTu1	91	62.361	ENSCJAG00000006236	TUFM	98	62.361	Callithrix_jacchus
FBgn0024556	mEFTu1	91	62.584	ENSCAFG00000017216	TUFM	99	62.584	Canis_familiaris
FBgn0024556	mEFTu1	91	62.584	ENSCAFG00020017574	TUFM	99	62.584	Canis_lupus_dingo
FBgn0024556	mEFTu1	91	62.361	ENSCHIG00000020583	TUFM	99	62.361	Capra_hircus
FBgn0024556	mEFTu1	91	63.252	ENSTSYG00000026053	TUFM	98	63.252	Carlito_syrichta
FBgn0024556	mEFTu1	89	64.237	ENSCPOG00000010534	TUFM	97	64.237	Cavia_porcellus
FBgn0024556	mEFTu1	91	62.806	ENSCCAG00000033296	TUFM	98	62.806	Cebus_capucinus
FBgn0024556	mEFTu1	91	62.361	ENSCATG00000035822	TUFM	98	62.361	Cercocebus_atys
FBgn0024556	mEFTu1	89	64.091	ENSCLAG00000013969	TUFM	97	64.091	Chinchilla_lanigera
FBgn0024556	mEFTu1	91	62.361	ENSCSAG00000006314	TUFM	98	62.361	Chlorocebus_sabaeus
FBgn0024556	mEFTu1	91	63.170	ENSCHOG00000009077	TUFM	98	63.170	Choloepus_hoffmanni
FBgn0024556	mEFTu1	81	71.571	ENSCPBG00000003874	TUFM	88	71.571	Chrysemys_picta_bellii
FBgn0024556	mEFTu1	84	54.237	ENSCING00000002841	-	96	54.237	Ciona_intestinalis
FBgn0024556	mEFTu1	81	58.987	ENSCSAVG00000009380	-	86	58.987	Ciona_savignyi
FBgn0024556	mEFTu1	91	62.806	ENSCANG00000035829	TUFM	98	62.806	Colobus_angolensis_palliatus
FBgn0024556	mEFTu1	82	67.164	ENSCGRG00001022949	Tufm	89	67.164	Cricetulus_griseus_chok1gshd
FBgn0024556	mEFTu1	82	67.164	ENSCGRG00000001868	-	89	67.164	Cricetulus_griseus_crigri
FBgn0024556	mEFTu1	82	45.432	ENSCGRG00000013193	-	88	45.432	Cricetulus_griseus_crigri
FBgn0024556	mEFTu1	83	69.042	ENSCSEG00000013841	tufm	95	69.042	Cynoglossus_semilaevis
FBgn0024556	mEFTu1	83	70.270	ENSCVAG00000006251	tufm	96	70.025	Cyprinodon_variegatus
FBgn0024556	mEFTu1	84	67.067	ENSDARG00000104173	tufm	92	67.067	Danio_rerio
FBgn0024556	mEFTu1	90	63.719	ENSDNOG00000047636	TUFM	97	63.719	Dasypus_novemcinctus
FBgn0024556	mEFTu1	86	54.245	ENSDORG00000023544	-	99	54.245	Dipodomys_ordii
FBgn0024556	mEFTu1	80	52.806	ENSETEG00000009601	TUFM	98	52.806	Echinops_telfairi
FBgn0024556	mEFTu1	84	66.908	ENSEBUG00000015907	tufm	68	66.908	Eptatretus_burgeri
FBgn0024556	mEFTu1	91	63.053	ENSEASG00005015477	TUFM	98	63.053	Equus_asinus_asinus
FBgn0024556	mEFTu1	91	63.053	ENSECAG00000019763	TUFM	99	63.053	Equus_caballus
FBgn0024556	mEFTu1	75	65.761	ENSEEUG00000001402	TUFM	92	65.761	Erinaceus_europaeus
FBgn0024556	mEFTu1	81	70.647	ENSELUG00000013410	tufm	86	70.647	Esox_lucius
FBgn0024556	mEFTu1	84	66.265	ENSFCAG00000003103	TUFM	60	66.265	Felis_catus
FBgn0024556	mEFTu1	79	64.508	ENSFDAG00000010881	TUFM	97	64.508	Fukomys_damarensis
FBgn0024556	mEFTu1	83	65.111	ENSFHEG00000020646	tufm	90	65.111	Fundulus_heteroclitus
FBgn0024556	mEFTu1	80	72.519	ENSGMOG00000014616	tufm	88	72.519	Gadus_morhua
FBgn0024556	mEFTu1	83	70.270	ENSGAFG00000004682	tufm	95	70.025	Gambusia_affinis
FBgn0024556	mEFTu1	81	70.750	ENSGACG00000012961	tufm	92	72.050	Gasterosteus_aculeatus
FBgn0024556	mEFTu1	87	70.023	ENSGAGG00000006132	TUFM	96	73.214	Gopherus_agassizii
FBgn0024556	mEFTu1	82	66.915	ENSGGOG00000014136	TUFM	98	62.361	Gorilla_gorilla
FBgn0024556	mEFTu1	83	70.270	ENSHBUG00000019031	tufm	88	70.270	Haplochromis_burtoni
FBgn0024556	mEFTu1	89	63.409	ENSHGLG00000006613	TUFM	97	63.409	Heterocephalus_glaber_female
FBgn0024556	mEFTu1	89	60.227	ENSHGLG00100004096	TUFM	97	60.227	Heterocephalus_glaber_male
FBgn0024556	mEFTu1	83	70.516	ENSHCOG00000014418	tufm	94	70.516	Hippocampus_comes
FBgn0024556	mEFTu1	83	69.193	ENSIPUG00000022457	tufm	92	69.193	Ictalurus_punctatus
FBgn0024556	mEFTu1	64	42.357	ENSIPUG00000020682	-	90	42.089	Ictalurus_punctatus
FBgn0024556	mEFTu1	91	63.029	ENSSTOG00000011837	TUFM	99	63.029	Ictidomys_tridecemlineatus
FBgn0024556	mEFTu1	91	62.584	ENSJJAG00000011840	Tufm	99	62.584	Jaculus_jaculus
FBgn0024556	mEFTu1	89	66.970	ENSKMAG00000009794	tufm	97	66.970	Kryptolebias_marmoratus
FBgn0024556	mEFTu1	82	69.383	ENSLBEG00000023735	tufm	95	69.383	Labrus_bergylta
FBgn0024556	mEFTu1	83	70.244	ENSLACG00000008242	TUFM	91	70.244	Latimeria_chalumnae
FBgn0024556	mEFTu1	86	64.151	ENSLAFG00000028911	TUFM	94	64.151	Loxodonta_africana
FBgn0024556	mEFTu1	91	62.361	ENSMFAG00000033739	TUFM	98	62.361	Macaca_fascicularis
FBgn0024556	mEFTu1	91	62.361	ENSMMUG00000003303	TUFM	98	62.361	Macaca_mulatta
FBgn0024556	mEFTu1	91	62.361	ENSMNEG00000006031	TUFM	98	62.361	Macaca_nemestrina
FBgn0024556	mEFTu1	91	62.361	ENSMLEG00000042133	TUFM	98	62.361	Mandrillus_leucophaeus
FBgn0024556	mEFTu1	81	71.000	ENSMAMG00000002053	tufm	90	71.000	Mastacembelus_armatus
FBgn0024556	mEFTu1	83	70.025	ENSMZEG00005010857	tufm	85	70.025	Maylandia_zebra
FBgn0024556	mEFTu1	82	67.662	ENSMAUG00000010490	Tufm	89	67.662	Mesocricetus_auratus
FBgn0024556	mEFTu1	91	62.584	ENSMICG00000007650	TUFM	99	62.584	Microcebus_murinus
FBgn0024556	mEFTu1	79	68.462	ENSMOCG00000010051	Tufm	86	68.462	Microtus_ochrogaster
FBgn0024556	mEFTu1	83	67.322	ENSMMOG00000012344	tufm	90	67.322	Mola_mola
FBgn0024556	mEFTu1	80	70.844	ENSMODG00000015564	TUFM	86	70.844	Monodelphis_domestica
FBgn0024556	mEFTu1	81	69.825	ENSMALG00000020254	tufm	90	69.825	Monopterus_albus
FBgn0024556	mEFTu1	91	63.496	MGP_CAROLIEiJ_G0030448	-	99	63.496	Mus_caroli
FBgn0024556	mEFTu1	91	63.496	MGP_CAROLIEiJ_G0030449	-	99	63.496	Mus_caroli
FBgn0024556	mEFTu1	82	67.910	ENSMUSG00000073838	Tufm	89	67.910	Mus_musculus
FBgn0024556	mEFTu1	82	67.662	MGP_PahariEiJ_G0013659	-	89	67.662	Mus_pahari
FBgn0024556	mEFTu1	82	67.662	MGP_PahariEiJ_G0013658	-	89	67.662	Mus_pahari
FBgn0024556	mEFTu1	82	61.959	MGP_SPRETEiJ_G0031563	-	90	61.959	Mus_spretus
FBgn0024556	mEFTu1	82	67.662	MGP_SPRETEiJ_G0031562	-	89	67.662	Mus_spretus
FBgn0024556	mEFTu1	73	66.944	ENSMPUG00000012816	TUFM	96	66.667	Mustela_putorius_furo
FBgn0024556	mEFTu1	82	67.413	ENSMLUG00000012335	-	89	67.413	Myotis_lucifugus
FBgn0024556	mEFTu1	82	67.910	ENSNGAG00000008610	Tufm	89	67.910	Nannospalax_galili
FBgn0024556	mEFTu1	74	69.613	ENSNBRG00000006466	tufm	95	69.638	Neolamprologus_brichardi
FBgn0024556	mEFTu1	91	58.797	ENSNLEG00000011063	TUFM	98	58.797	Nomascus_leucogenys
FBgn0024556	mEFTu1	70	69.477	ENSMEUG00000011131	TUFM	99	69.477	Notamacropus_eugenii
FBgn0024556	mEFTu1	82	58.209	ENSOPRG00000002318	-	88	58.209	Ochotona_princeps
FBgn0024556	mEFTu1	83	69.779	ENSONIG00000019389	tufm	91	69.779	Oreochromis_niloticus
FBgn0024556	mEFTu1	86	66.981	ENSOANG00000013114	TUFM	97	66.981	Ornithorhynchus_anatinus
FBgn0024556	mEFTu1	86	65.647	ENSOCUG00000002683	TUFM	93	65.647	Oryctolagus_cuniculus
FBgn0024556	mEFTu1	81	70.823	ENSORLG00000011497	tufm	90	70.823	Oryzias_latipes
FBgn0024556	mEFTu1	81	70.750	ENSORLG00020013437	tufm	90	70.750	Oryzias_latipes_hni
FBgn0024556	mEFTu1	81	71.000	ENSORLG00015003107	tufm	90	71.000	Oryzias_latipes_hsok
FBgn0024556	mEFTu1	85	68.496	ENSOMEG00000016958	tufm	90	71.000	Oryzias_melastigma
FBgn0024556	mEFTu1	91	62.806	ENSOGAG00000006875	TUFM	99	62.806	Otolemur_garnettii
FBgn0024556	mEFTu1	81	66.917	ENSOARG00000002357	TUFM	96	66.917	Ovis_aries
FBgn0024556	mEFTu1	82	66.915	ENSPPAG00000035168	TUFM	98	62.361	Pan_paniscus
FBgn0024556	mEFTu1	86	65.412	ENSPPRG00000014248	TUFM	93	65.412	Panthera_pardus
FBgn0024556	mEFTu1	82	67.413	ENSPTIG00000009980	TUFM	94	67.413	Panthera_tigris_altaica
FBgn0024556	mEFTu1	82	66.915	ENSPTRG00000007939	TUFM	98	62.361	Pan_troglodytes
FBgn0024556	mEFTu1	91	62.361	ENSPANG00000019624	TUFM	98	62.361	Papio_anubis
FBgn0024556	mEFTu1	82	72.208	ENSPKIG00000023809	tufm	89	72.208	Paramormyrops_kingsleyae
FBgn0024556	mEFTu1	62	69.737	ENSPSIG00000005302	TUFM	97	69.737	Pelodiscus_sinensis
FBgn0024556	mEFTu1	81	70.250	ENSPMGG00000015631	tufm	95	70.250	Periophthalmus_magnuspinnatus
FBgn0024556	mEFTu1	96	61.407	ENSPEMG00000012208	Tufm	99	61.407	Peromyscus_maniculatus_bairdii
FBgn0024556	mEFTu1	91	62.914	ENSPCIG00000025208	TUFM	99	62.914	Phascolarctos_cinereus
FBgn0024556	mEFTu1	83	67.813	ENSPFOG00000007043	tufm	91	67.813	Poecilia_formosa
FBgn0024556	mEFTu1	83	67.813	ENSPLAG00000014372	tufm	91	67.813	Poecilia_latipinna
FBgn0024556	mEFTu1	83	67.813	ENSPMEG00000019508	tufm	91	67.813	Poecilia_mexicana
FBgn0024556	mEFTu1	83	67.813	ENSPMEG00000014520	-	93	67.813	Poecilia_mexicana
FBgn0024556	mEFTu1	83	68.059	ENSPREG00000013913	tufm	91	68.059	Poecilia_reticulata
FBgn0024556	mEFTu1	91	61.470	ENSPPYG00000007226	TUFM	98	61.470	Pongo_abelii
FBgn0024556	mEFTu1	91	59.645	ENSPCAG00000015294	TUFM	99	59.645	Procavia_capensis
FBgn0024556	mEFTu1	89	63.781	ENSPCOG00000012267	TUFM	96	63.781	Propithecus_coquereli
FBgn0024556	mEFTu1	83	69.533	ENSPNYG00000008905	tufm	92	69.533	Pundamilia_nyererei
FBgn0024556	mEFTu1	83	70.416	ENSPNAG00000018881	tufm	92	70.416	Pygocentrus_nattereri
FBgn0024556	mEFTu1	82	67.662	ENSRNOG00000018604	Tufm	89	67.662	Rattus_norvegicus
FBgn0024556	mEFTu1	52	64.032	ENSRBIG00000036713	-	93	64.032	Rhinopithecus_bieti
FBgn0024556	mEFTu1	88	61.468	ENSRBIG00000042008	-	97	61.468	Rhinopithecus_bieti
FBgn0024556	mEFTu1	62	62.046	ENSRROG00000044977	-	82	62.046	Rhinopithecus_roxellana
FBgn0024556	mEFTu1	91	62.806	ENSRROG00000036858	-	98	62.806	Rhinopithecus_roxellana
FBgn0024556	mEFTu1	86	59.485	YOR187W	TUF1	97	59.485	Saccharomyces_cerevisiae
FBgn0024556	mEFTu1	90	62.896	ENSSBOG00000026542	TUFM	97	62.896	Saimiri_boliviensis_boliviensis
FBgn0024556	mEFTu1	83	68.780	ENSSHAG00000012121	TUFM	95	68.780	Sarcophilus_harrisii
FBgn0024556	mEFTu1	83	71.007	ENSSFOG00015013352	tufm	92	71.007	Scleropages_formosus
FBgn0024556	mEFTu1	88	65.287	ENSSMAG00000010053	tufm	98	65.287	Scophthalmus_maximus
FBgn0024556	mEFTu1	83	69.042	ENSSDUG00000016896	tufm	90	70.000	Seriola_dumerili
FBgn0024556	mEFTu1	81	69.750	ENSSLDG00000006494	tufm	90	69.750	Seriola_lalandi_dorsalis
FBgn0024556	mEFTu1	75	67.120	ENSSARG00000011228	TUFM	97	67.120	Sorex_araneus
FBgn0024556	mEFTu1	81	63.184	ENSSPUG00000016312	TUFM	92	63.184	Sphenodon_punctatus
FBgn0024556	mEFTu1	81	71.250	ENSSPAG00000009936	tufm	92	71.000	Stegastes_partitus
FBgn0024556	mEFTu1	91	62.806	ENSSSCG00000007803	TUFM	99	62.806	Sus_scrofa
FBgn0024556	mEFTu1	89	64.444	ENSTRUG00000008300	tufm	90	70.000	Takifugu_rubripes
FBgn0024556	mEFTu1	89	60.633	ENSTBEG00000015029	TUFM	97	62.302	Tupaia_belangeri
FBgn0024556	mEFTu1	53	63.707	ENSTTRG00000005930	-	57	63.707	Tursiops_truncatus
FBgn0024556	mEFTu1	56	67.273	ENSTTRG00000001980	-	100	67.273	Tursiops_truncatus
FBgn0024556	mEFTu1	82	67.164	ENSUAMG00000001471	TUFM	89	67.164	Ursus_americanus
FBgn0024556	mEFTu1	82	67.662	ENSUMAG00000009341	TUFM	99	67.662	Ursus_maritimus
FBgn0024556	mEFTu1	56	66.788	ENSVPAG00000009541	TUFM	100	66.788	Vicugna_pacos
FBgn0024556	mEFTu1	86	65.176	ENSVVUG00000024170	TUFM	94	65.176	Vulpes_vulpes
FBgn0024556	mEFTu1	74	44.687	ENSXETG00000028019	-	66	77.660	Xenopus_tropicalis
FBgn0024556	mEFTu1	83	70.025	ENSXMAG00000011848	tufm	94	70.025	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000278	mitotic cell cycle	21383842.	IMP	Process
GO:0003746	translation elongation factor activity	21873635.	IBA	Function
GO:0003746	translation elongation factor activity	-	ISS	Function
GO:0003924	GTPase activity	-	ISS	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005739	mitochondrion	16212416.19317464.	HDA	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	-	ISS	Component
GO:0006414	translational elongation	21873635.	IBA	Process
GO:0006414	translational elongation	-	ISS	Process
GO:0007030	Golgi organization	21383842.	IMP	Process
GO:0008283	cell proliferation	21383842.	IMP	Process
GO:0070125	mitochondrial translational elongation	21873635.	IBA	Process