EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
FBgn0024921 (Gene tree)
Gene ID
38721
Gene Symbol
Tnpo
Alias
-
Full Name
Transportin
Gene Type
protein_coding
Species
Drosophila_melanogaster
Status
confidence
Strand
Plus strand
Length
6906 bases
Position
chr3L:6193480-6200385
Accession
FBgn0024921
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
FBpp0076708IBN_NPF03810.192.1e-1611
FBpp0076709IBN_NPF03810.192.1e-1611
FBpp0076710IBN_NPF03810.192.1e-1611
FBpp0305273IBN_NPF03810.192.1e-1611
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27378189Global changes of the RNA bound proteome during the maternal-to-zygotic transition in DrosophilaIC & embryos.MZT2016 Jul 5Sysoev VODOI: 10.1038/ncomms12128
27197210The mRNA-bound proteome of the early fly embryoIC & embryos2016 Apr 28Wessels HHDOI: 10.1101/gr.200386.115
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
FBtr0077002-4666-FBpp0076710893 (aa)-Q9VRV8
FBtr0077001-4704-FBpp0076709893 (aa)-Q9VRV8
FBtr0077000-5496-FBpp0076708893 (aa)-Q9VRV8
FBtr0333059-5414-FBpp0305273893 (aa)-O76331
Gene Model
Click here to download FBgn0024921's gene model file
Protein-Protein Interaction (PPI)

Clik here to download FBgn0024921's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
FBgn0024921Tnpo10068.757FBgn0035693CG82199968.421
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
FBgn0024921Tnpo10072.371ENSG00000105576TNPO210072.483Homo_sapiens
FBgn0024921Tnpo8270.959ENSAPOG00000013185-9869.588Acanthochromis_polyacanthus
FBgn0024921Tnpo10073.043ENSAPOG00000009339TNPO210073.154Acanthochromis_polyacanthus
FBgn0024921Tnpo10070.133ENSAMEG00000012123TNPO210070.133Ailuropoda_melanoleuca
FBgn0024921Tnpo8772.165ENSACIG00000007518tnpo29872.144Amphilophus_citrinellus
FBgn0024921Tnpo8772.587ENSACIG00000009586-10072.844Amphilophus_citrinellus
FBgn0024921Tnpo10072.595ENSAOCG00000010374tnpo210072.819Amphiprion_ocellaris
FBgn0024921Tnpo10073.043ENSAOCG00000010152-10073.154Amphiprion_ocellaris
FBgn0024921Tnpo10072.595ENSAPEG00000008429tnpo210072.819Amphiprion_percula
FBgn0024921Tnpo10073.043ENSAPEG00000013268-10073.154Amphiprion_percula
FBgn0024921Tnpo10072.148ENSATEG00000024761TNPO210072.371Anabas_testudineus
FBgn0024921Tnpo10073.154ENSATEG00000019171-10073.266Anabas_testudineus
FBgn0024921Tnpo10072.483ENSACAG00000003576TNPO210072.707Anolis_carolinensis
FBgn0024921Tnpo10072.371ENSANAG00000036645TNPO210072.483Aotus_nancymaae
FBgn0024921Tnpo10072.595ENSACLG00000001853tnpo210072.819Astatotilapia_calliptera
FBgn0024921Tnpo10069.205ENSACLG00000020672-10069.317Astatotilapia_calliptera
FBgn0024921Tnpo10071.444ENSAMXG00000010246tnpo210071.555Astyanax_mexicanus
FBgn0024921Tnpo10072.483ENSBTAG00000011811TNPO210072.595Bos_taurus
FBgn0024921Tnpo10071.571ENSCJAG00000005096TNPO210071.681Callithrix_jacchus
FBgn0024921Tnpo10072.595ENSCAFG00000017226TNPO28572.595Canis_familiaris
FBgn0024921Tnpo10072.483ENSCAFG00020005115TNPO210072.595Canis_lupus_dingo
FBgn0024921Tnpo10069.435ENSCHIG00000011718TNPO210069.546Capra_hircus
FBgn0024921Tnpo10072.483ENSTSYG00000003828TNPO210072.595Carlito_syrichta
FBgn0024921Tnpo9471.158ENSCAPG00000015700TNPO29671.277Cavia_aperea
FBgn0024921Tnpo10072.595ENSCPOG00000007033TNPO210072.707Cavia_porcellus
FBgn0024921Tnpo10072.371ENSCCAG00000024574TNPO210072.483Cebus_capucinus
FBgn0024921Tnpo10071.571ENSCATG00000042599TNPO210071.681Cercocebus_atys
FBgn0024921Tnpo10072.595ENSCLAG00000013442TNPO210072.707Chinchilla_lanigera
FBgn0024921Tnpo10072.371ENSCSAG00000006597TNPO210072.483Chlorocebus_sabaeus
FBgn0024921Tnpo10072.371ENSCPBG00000023892TNPO210072.595Chrysemys_picta_bellii
FBgn0024921Tnpo9672.938ENSCANG00000027834TNPO29873.055Colobus_angolensis_palliatus
FBgn0024921Tnpo10071.681ENSCGRG00001015917Tnpo210071.792Cricetulus_griseus_chok1gshd
FBgn0024921Tnpo10072.483ENSCGRG00000012601Tnpo210072.595Cricetulus_griseus_crigri
FBgn0024921Tnpo8771.630ENSCSEG00000011477-10071.630Cynoglossus_semilaevis
FBgn0024921Tnpo10071.029ENSCSEG00000012923tnpo210071.253Cynoglossus_semilaevis
FBgn0024921Tnpo10073.043ENSCVAG00000001908TNPO210073.154Cyprinodon_variegatus
FBgn0024921Tnpo10072.148ENSCVAG00000002750tnpo210072.371Cyprinodon_variegatus
FBgn0024921Tnpo10072.595ENSDARG00000038239tnpo210072.707Danio_rerio
FBgn0024921Tnpo8866.455ENSDNOG00000043264TNPO28466.328Dasypus_novemcinctus
FBgn0024921Tnpo10067.699ENSDORG00000014993Tnpo210067.810Dipodomys_ordii
FBgn0024921Tnpo9166.080ENSETEG00000014785TNPO29266.080Echinops_telfairi
FBgn0024921Tnpo10072.260ENSEASG00005004160TNPO210072.483Equus_asinus_asinus
FBgn0024921Tnpo10072.371ENSECAG00000013673TNPO210072.483Equus_caballus
FBgn0024921Tnpo7670.235ENSELUG00000016542-9964.504Esox_lucius
FBgn0024921Tnpo10071.523ENSELUG00000008680tnpo210071.634Esox_lucius
FBgn0024921Tnpo10071.571ENSFCAG00000000467TNPO210071.571Felis_catus
FBgn0024921Tnpo10072.595ENSFDAG00000021543TNPO210072.707Fukomys_damarensis
FBgn0024921Tnpo9772.633ENSFHEG00000009734TNPO29972.864Fundulus_heteroclitus
FBgn0024921Tnpo10072.036ENSFHEG00000016501tnpo210072.260Fundulus_heteroclitus
FBgn0024921Tnpo10066.852ENSGMOG00000009021tnpo210066.407Gadus_morhua
FBgn0024921Tnpo8072.609ENSGMOG00000014237-9072.771Gadus_morhua
FBgn0024921Tnpo10072.483ENSGAFG00000018993tnpo210072.595Gambusia_affinis
FBgn0024921Tnpo10073.043ENSGAFG00000010401TNPO210073.154Gambusia_affinis
FBgn0024921Tnpo10072.371ENSGAGG00000010150TNPO210072.595Gopherus_agassizii
FBgn0024921Tnpo10072.595ENSHBUG00000014849tnpo210072.819Haplochromis_burtoni
FBgn0024921Tnpo10073.043ENSHBUG00000018317-10073.154Haplochromis_burtoni
FBgn0024921Tnpo10072.595ENSHGLG00000016928TNPO210072.707Heterocephalus_glaber_female
FBgn0024921Tnpo10071.239ENSHGLG00100009938TNPO210071.350Heterocephalus_glaber_male
FBgn0024921Tnpo10072.260ENSHCOG00000005914tnpo210072.260Hippocampus_comes
FBgn0024921Tnpo10072.931ENSHCOG00000020440-10073.043Hippocampus_comes
FBgn0024921Tnpo10072.483ENSIPUG00000005768tnpo210072.595Ictalurus_punctatus
FBgn0024921Tnpo10073.490ENSIPUG00000006884TNPO29973.266Ictalurus_punctatus
FBgn0024921Tnpo10072.595ENSSTOG00000006952TNPO210072.707Ictidomys_tridecemlineatus
FBgn0024921Tnpo10071.571ENSJJAG00000016820Tnpo210071.681Jaculus_jaculus
FBgn0024921Tnpo10073.043ENSKMAG00000018430TNPO210073.154Kryptolebias_marmoratus
FBgn0024921Tnpo10071.365ENSKMAG00000021274TNPO210071.477Kryptolebias_marmoratus
FBgn0024921Tnpo10072.260ENSLBEG00000026241tnpo210072.595Labrus_bergylta
FBgn0024921Tnpo10073.154ENSLBEG00000005301-10073.266Labrus_bergylta
FBgn0024921Tnpo10071.141ENSLACG00000012322TNPO29971.141Latimeria_chalumnae
FBgn0024921Tnpo10073.154ENSLOCG00000006178tnpo29973.154Lepisosteus_oculatus
FBgn0024921Tnpo10071.571ENSLAFG00000003661TNPO210071.681Loxodonta_africana
FBgn0024921Tnpo10071.571ENSMFAG00000037531TNPO210071.681Macaca_fascicularis
FBgn0024921Tnpo10072.371ENSMMUG00000005684TNPO210072.483Macaca_mulatta
FBgn0024921Tnpo10072.371ENSMNEG00000041024TNPO210072.483Macaca_nemestrina
FBgn0024921Tnpo9771.789ENSMLEG00000018391TNPO29872.216Mandrillus_leucophaeus
FBgn0024921Tnpo10073.043ENSMAMG00000011862-10073.154Mastacembelus_armatus
FBgn0024921Tnpo10071.302ENSMAMG00000023658tnpo210071.523Mastacembelus_armatus
FBgn0024921Tnpo10069.721ENSMZEG00005011298TNPO210069.832Maylandia_zebra
FBgn0024921Tnpo10072.595ENSMZEG00005023965tnpo210072.819Maylandia_zebra
FBgn0024921Tnpo10073.043ENSMZEG00005007408-10073.154Maylandia_zebra
FBgn0024921Tnpo10072.371ENSMICG00000016153TNPO210072.483Microcebus_murinus
FBgn0024921Tnpo10072.483ENSMOCG00000016489Tnpo210072.595Microtus_ochrogaster
FBgn0024921Tnpo8769.459ENSMMOG00000005063TNPO29369.459Mola_mola
FBgn0024921Tnpo8772.365ENSMMOG00000021390TNPO29972.622Mola_mola
FBgn0024921Tnpo10071.681ENSMODG00000006888TNPO210071.903Monodelphis_domestica
FBgn0024921Tnpo10072.483ENSMALG00000004721tnpo210072.595Monopterus_albus
FBgn0024921Tnpo10072.931ENSMALG00000006232TNPO210073.043Monopterus_albus
FBgn0024921Tnpo10072.371MGP_CAROLIEiJ_G0031326Tnpo210072.595Mus_caroli
FBgn0024921Tnpo10072.371ENSMUSG00000031691Tnpo210072.595Mus_musculus
FBgn0024921Tnpo10072.260MGP_PahariEiJ_G0022931Tnpo210072.483Mus_pahari
FBgn0024921Tnpo10072.371MGP_SPRETEiJ_G0032445Tnpo210072.595Mus_spretus
FBgn0024921Tnpo10072.483ENSMPUG00000004663TNPO210072.595Mustela_putorius_furo
FBgn0024921Tnpo9673.171ENSMLUG00000012669TNPO29973.287Myotis_lucifugus
FBgn0024921Tnpo10072.483ENSNGAG00000000650Tnpo210072.595Nannospalax_galili
FBgn0024921Tnpo10068.233ENSNBRG00000006242TNPO210068.456Neolamprologus_brichardi
FBgn0024921Tnpo10073.043ENSNBRG00000023849TNPO210073.154Neolamprologus_brichardi
FBgn0024921Tnpo10064.602ENSNLEG00000012758TNPO210064.602Nomascus_leucogenys
FBgn0024921Tnpo10067.146ENSMEUG00000016658TNPO210067.367Notamacropus_eugenii
FBgn0024921Tnpo10072.595ENSODEG00000009670TNPO210072.707Octodon_degus
FBgn0024921Tnpo10072.483ENSONIG00000002147tnpo210072.707Oreochromis_niloticus
FBgn0024921Tnpo10072.315ENSONIG00000017706-10072.425Oreochromis_niloticus
FBgn0024921Tnpo10071.924ENSOANG00000010051TNPO210072.036Ornithorhynchus_anatinus
FBgn0024921Tnpo10061.204ENSOCUG00000008251TNPO29061.204Oryctolagus_cuniculus
FBgn0024921Tnpo10072.483ENSORLG00000010363tnpo210072.707Oryzias_latipes
FBgn0024921Tnpo5770.099ENSORLG00000011763TNPO29970.495Oryzias_latipes
FBgn0024921Tnpo5770.099ENSORLG00020001020TNPO29970.495Oryzias_latipes_hni
FBgn0024921Tnpo10072.483ENSORLG00020015785tnpo210072.707Oryzias_latipes_hni
FBgn0024921Tnpo10072.371ENSORLG00015005489tnpo210072.483Oryzias_latipes_hsok
FBgn0024921Tnpo5770.099ENSORLG00015003941TNPO29970.495Oryzias_latipes_hsok
FBgn0024921Tnpo10072.819ENSOMEG00000013440TNPO210072.931Oryzias_melastigma
FBgn0024921Tnpo10072.371ENSOMEG00000014877TNPO210072.483Oryzias_melastigma
FBgn0024921Tnpo10072.148ENSOARG00000011717TNPO29472.010Ovis_aries
FBgn0024921Tnpo10071.571ENSPPAG00000019494TNPO210071.681Pan_paniscus
FBgn0024921Tnpo10071.681ENSPPRG00000003075TNPO210071.792Panthera_pardus
FBgn0024921Tnpo8569.525ENSPTIG00000011213TNPO29969.131Panthera_tigris_altaica
FBgn0024921Tnpo10071.571ENSPTRG00000010535TNPO210071.681Pan_troglodytes
FBgn0024921Tnpo10071.571ENSPANG00000016857TNPO210071.681Papio_anubis
FBgn0024921Tnpo9772.759ENSPKIG00000002899-9973.165Paramormyrops_kingsleyae
FBgn0024921Tnpo10072.931ENSPKIG00000004824tnpo210072.931Paramormyrops_kingsleyae
FBgn0024921Tnpo10069.780ENSPSIG00000010215TNPO210069.451Pelodiscus_sinensis
FBgn0024921Tnpo5769.703ENSPMGG00000022850tnpo29969.901Periophthalmus_magnuspinnatus
FBgn0024921Tnpo8772.423ENSPMGG00000016459TNPO29872.680Periophthalmus_magnuspinnatus
FBgn0024921Tnpo10071.681ENSPEMG00000018702Tnpo210071.792Peromyscus_maniculatus_bairdii
FBgn0024921Tnpo9971.445ENSPCIG00000015327TNPO29871.557Phascolarctos_cinereus
FBgn0024921Tnpo10072.931ENSPFOG00000005417TNPO210073.043Poecilia_formosa
FBgn0024921Tnpo10072.483ENSPFOG00000012466tnpo210072.595Poecilia_formosa
FBgn0024921Tnpo9373.229ENSPLAG00000010687TNPO29773.349Poecilia_latipinna
FBgn0024921Tnpo10072.595ENSPLAG00000018842tnpo210072.707Poecilia_latipinna
FBgn0024921Tnpo10072.931ENSPMEG00000014011-10073.043Poecilia_mexicana
FBgn0024921Tnpo10072.595ENSPMEG00000006069tnpo210072.707Poecilia_mexicana
FBgn0024921Tnpo10072.371ENSPREG00000001121TNPO210072.483Poecilia_reticulata
FBgn0024921Tnpo10072.931ENSPREG00000000415TNPO29973.043Poecilia_reticulata
FBgn0024921Tnpo10072.371ENSPPYG00000009602TNPO210072.483Pongo_abelii
FBgn0024921Tnpo10065.601ENSPCAG00000014916TNPO210065.601Procavia_capensis
FBgn0024921Tnpo10072.371ENSPCOG00000018386TNPO210072.483Propithecus_coquereli
FBgn0024921Tnpo10069.163ENSPVAG00000013411TNPO210069.273Pteropus_vampyrus
FBgn0024921Tnpo10069.205ENSPNYG00000001235-10069.317Pundamilia_nyererei
FBgn0024921Tnpo10072.707ENSPNYG00000013748tnpo210072.819Pundamilia_nyererei
FBgn0024921Tnpo10072.260ENSPNAG00000024491tnpo210072.371Pygocentrus_nattereri
FBgn0024921Tnpo10072.707ENSPNAG00000026208-10072.819Pygocentrus_nattereri
FBgn0024921Tnpo10072.595ENSRNOG00000003970Tnpo29772.707Rattus_norvegicus
FBgn0024921Tnpo10072.371ENSRBIG00000036652TNPO210072.483Rhinopithecus_bieti
FBgn0024921Tnpo10072.371ENSRROG00000040402TNPO210072.483Rhinopithecus_roxellana
FBgn0024921Tnpo10072.371ENSSBOG00000019551TNPO210072.483Saimiri_boliviensis_boliviensis
FBgn0024921Tnpo9673.171ENSSHAG00000015858TNPO29973.287Sarcophilus_harrisii
FBgn0024921Tnpo10073.602ENSSFOG00015010934tnpo210073.266Scleropages_formosus
FBgn0024921Tnpo10072.707ENSSFOG00015018955TNPO210072.931Scleropages_formosus
FBgn0024921Tnpo10073.043ENSSMAG00000004050-10073.154Scophthalmus_maximus
FBgn0024921Tnpo10072.371ENSSMAG00000012008tnpo210072.483Scophthalmus_maximus
FBgn0024921Tnpo10073.043ENSSDUG00000002607TNPO210073.154Seriola_dumerili
FBgn0024921Tnpo10072.483ENSSDUG00000001767tnpo210072.595Seriola_dumerili
FBgn0024921Tnpo10072.483ENSSLDG00000025629tnpo210072.595Seriola_lalandi_dorsalis
FBgn0024921Tnpo10073.043ENSSLDG00000013107-10073.154Seriola_lalandi_dorsalis
FBgn0024921Tnpo8273.750ENSSARG00000003825TNPO28373.750Sorex_araneus
FBgn0024921Tnpo10072.191ENSSPUG00000000736TNPO210071.858Sphenodon_punctatus
FBgn0024921Tnpo10071.508ENSSPAG00000008511-10071.620Stegastes_partitus
FBgn0024921Tnpo10072.595ENSSPAG00000008512tnpo210072.819Stegastes_partitus
FBgn0024921Tnpo10072.483ENSSSCG00000013726TNPO210072.595Sus_scrofa
FBgn0024921Tnpo10072.595ENSTRUG00000009453TNPO210072.707Takifugu_rubripes
FBgn0024921Tnpo10072.036ENSTRUG00000012698tnpo29972.260Takifugu_rubripes
FBgn0024921Tnpo10061.006ENSTNIG00000003295TNPO29875.862Tetraodon_nigroviridis
FBgn0024921Tnpo10071.700ENSTNIG00000014071TNPO210071.700Tetraodon_nigroviridis
FBgn0024921Tnpo10071.681ENSTTRG00000005443TNPO210071.792Tursiops_truncatus
FBgn0024921Tnpo10071.460ENSUAMG00000019621TNPO210071.571Ursus_americanus
FBgn0024921Tnpo10069.435ENSUMAG00000006504TNPO29969.435Ursus_maritimus
FBgn0024921Tnpo10066.331ENSVVUG00000023860TNPO210066.331Vulpes_vulpes
FBgn0024921Tnpo10071.700ENSXETG00000004771tnpo29971.588Xenopus_tropicalis
FBgn0024921Tnpo10070.694ENSXCOG00000014460TNPO29970.805Xiphophorus_couchianus
FBgn0024921Tnpo10073.154ENSXMAG00000012793TNPO210073.266Xiphophorus_maculatus
FBgn0024921Tnpo10072.595ENSXMAG00000014217TNPO210072.707Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0005737cytoplasm21873635.IBAComponent
GO:0005829cytosol-ISSComponent
GO:0006606protein import into nucleus-ISSProcess
GO:0006607NLS-bearing protein import into nucleus21873635.IBAProcess
GO:0006610ribosomal protein import into nucleus21873635.IBAProcess
GO:0008139nuclear localization sequence binding21873635.IBAFunction
GO:0008139nuclear localization sequence binding-ISSFunction
GO:0008536Ran GTPase binding-IEAFunction
GO:0008565protein transporter activity21873635.IBAFunction
GO:0031965nuclear membrane21873635.IBAComponent
GO:0034399nuclear periphery21873635.IBAComponent
GO:0035167larval lymph gland hemopoiesis25201876.IMPProcess
GO:0042306regulation of protein import into nucleus24413177.IMPProcess

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