EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0024957 (Gene tree)
Gene ID: 41269
Gene Symbol: Irp-1B
Alias: -
Full Name: Iron regulatory protein 1B
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: confidence
Strand: Minus strand
Length: 4252 bases
Position: chr3R:10408618-10412869
Accession: FBgn0024957
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0081736	Aconitase	PF00330.20	3.5e-180	1	1
FBpp0081736	Aconitase_C	PF00694.19	1.9e-43	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0082259	-	2901	-	FBpp0081736	899 (aa)	-	B5T1X0

Gene Model

Click here to download FBgn0024957's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0024957's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
FBgn0024957	Irp-1B	99	87.639	FBgn0024958	Irp-1A	99	87.639

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0024957	Irp-1B	99	64.430	WBGene00000040	aco-1	99	64.430	Caenorhabditis_elegans
FBgn0024957	Irp-1B	99	65.174	ENSCING00000009541	-	99	65.174	Ciona_intestinalis
FBgn0024957	Irp-1B	94	72.381	ENSCSAVG00000011708	-	99	66.016	Ciona_savignyi
FBgn0024957	Irp-1B	99	66.778	ENSEBUG00000003892	-	99	66.778	Eptatretus_burgeri

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003994	aconitate hydratase activity	21873635.	IBA	Function
GO:0003994	aconitate hydratase activity	16679315.	IDA	Function
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0006099	tricarboxylic acid cycle	21873635.	IBA	Process
GO:0006101	citrate metabolic process	21873635.	IBA	Process
GO:0030350	iron-responsive element binding	16679315.	IDA	Function
GO:0051539	4 iron, 4 sulfur cluster binding	21873635.	IBA	Function