EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0025571 (Gene tree)
Gene ID: 43912
Gene Symbol: SF1
Alias: -
Full Name: Splicing factor 1
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 4728 bases
Position: chr3R:17540421-17545148
Accession: FBgn0025571
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0082897	KH_1	PF00013.29	2.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0083456	-	2784	-	FBpp0082897	787 (aa)	-	Q8SXI7
FBtr0331707	-	2708	-	FBpp0304096	323 (aa)	-	A0A0B4KGU8
FBtr0331706	-	1533	-	FBpp0304095	347 (aa)	-	A0A0B4KG60

Gene Model

Click here to download FBgn0025571's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0025571's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0025571	SF1	64	44.872	ENSEBUG00000012728	sf1	56	52.488	Eptatretus_burgeri

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	18981222.	IC	Process
GO:0000398	mRNA splicing, via spliceosome	10908584.	ISS	Process
GO:0003723	RNA binding	-	ISS	Function
GO:0005634	nucleus	10606272.	IDA	Component
GO:0005681	spliceosomal complex	10908584.	ISS	Component
GO:0008270	zinc ion binding	-	IEA	Function
GO:0045131	pre-mRNA branch point binding	-	IEA	Function
GO:0071011	precatalytic spliceosome	18981222.	HDA	Component