EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0025630 (Gene tree)
Gene ID: 31175
Gene Symbol: Rtca
Alias: -
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 2478 bases
Position: chrX:2072413-2074890
Accession: FBgn0025630
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0070316	RTC	PF01137.21	1.4e-82	1	1
FBpp0310569	RTC	PF01137.21	1.4e-82	1	1
FBpp0070316	RTC_insert	PF05189.13	9e-16	1	1
FBpp0310569	RTC_insert	PF05189.13	9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0344156	-	2042	-	FBpp0310569	361 (aa)	-	O77264
FBtr0070330	-	2070	-	FBpp0070316	361 (aa)	-	O77264

Gene Model

Click here to download FBgn0025630's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0025630's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0025630	Rtca	98	38.547	ENSG00000137996	RTCA	88	62.791	Homo_sapiens
FBgn0025630	Rtca	99	39.118	ENSAPOG00000001345	rtca	99	39.118	Acanthochromis_polyacanthus
FBgn0025630	Rtca	72	36.090	ENSAMEG00000008855	RTCA	99	36.090	Ailuropoda_melanoleuca
FBgn0025630	Rtca	98	40.336	ENSACIG00000019643	rtca	98	40.336	Amphilophus_citrinellus
FBgn0025630	Rtca	98	39.776	ENSAOCG00000014979	rtca	97	39.776	Amphiprion_ocellaris
FBgn0025630	Rtca	98	39.776	ENSAPEG00000006945	rtca	97	39.776	Amphiprion_percula
FBgn0025630	Rtca	95	38.617	ENSATEG00000006315	rtca	95	38.617	Anabas_testudineus
FBgn0025630	Rtca	95	36.286	ENSAPLG00000015430	RTCA	99	36.286	Anas_platyrhynchos
FBgn0025630	Rtca	98	38.268	ENSANAG00000025446	RTCA	98	38.268	Aotus_nancymaae
FBgn0025630	Rtca	99	40.496	ENSACLG00000020770	rtca	99	40.496	Astatotilapia_calliptera
FBgn0025630	Rtca	97	40.449	ENSAMXG00000043271	rtca	98	40.449	Astyanax_mexicanus
FBgn0025630	Rtca	98	38.268	ENSBTAG00000006321	RTCA	98	38.268	Bos_taurus
FBgn0025630	Rtca	98	38.268	ENSCJAG00000003398	RTCA	98	38.268	Callithrix_jacchus
FBgn0025630	Rtca	99	38.082	ENSCAFG00000020010	RTCA	68	38.082	Canis_familiaris
FBgn0025630	Rtca	99	38.082	ENSCAFG00020011528	RTCA	57	38.082	Canis_lupus_dingo
FBgn0025630	Rtca	98	38.268	ENSCHIG00000018937	RTCA	98	38.268	Capra_hircus
FBgn0025630	Rtca	99	38.950	ENSTSYG00000011305	RTCA	99	38.950	Carlito_syrichta
FBgn0025630	Rtca	98	37.989	ENSCCAG00000021844	RTCA	97	39.571	Cebus_capucinus
FBgn0025630	Rtca	98	37.466	ENSCATG00000019364	RTCA	98	37.466	Cercocebus_atys
FBgn0025630	Rtca	85	35.256	ENSCLAG00000006125	RTCA	99	35.256	Chinchilla_lanigera
FBgn0025630	Rtca	98	38.547	ENSCSAG00000001509	RTCA	98	38.547	Chlorocebus_sabaeus
FBgn0025630	Rtca	98	38.827	ENSCHOG00000005211	RTCA	98	38.827	Choloepus_hoffmanni
FBgn0025630	Rtca	99	39.118	ENSCPBG00000026658	RTCA	99	39.118	Chrysemys_picta_bellii
FBgn0025630	Rtca	99	37.500	ENSCING00000007875	-	99	37.500	Ciona_intestinalis
FBgn0025630	Rtca	99	36.944	ENSCSAVG00000007269	-	99	36.944	Ciona_savignyi
FBgn0025630	Rtca	98	38.547	ENSCANG00000040106	RTCA	98	38.547	Colobus_angolensis_palliatus
FBgn0025630	Rtca	72	36.842	ENSCGRG00001013163	Rtca	84	36.842	Cricetulus_griseus_chok1gshd
FBgn0025630	Rtca	99	39.554	ENSCSEG00000000530	rtca	97	39.554	Cynoglossus_semilaevis
FBgn0025630	Rtca	98	35.278	ENSCVAG00000021809	rtca	98	35.278	Cyprinodon_variegatus
FBgn0025630	Rtca	99	40.833	ENSDARG00000002215	rtca	99	40.833	Danio_rerio
FBgn0025630	Rtca	98	39.106	ENSDNOG00000000456	RTCA	98	39.106	Dasypus_novemcinctus
FBgn0025630	Rtca	99	38.674	ENSDORG00000005448	Rtca	99	38.674	Dipodomys_ordii
FBgn0025630	Rtca	92	37.015	ENSEBUG00000008556	rtca	92	37.015	Eptatretus_burgeri
FBgn0025630	Rtca	98	38.827	ENSEASG00005015926	RTCA	98	38.827	Equus_asinus_asinus
FBgn0025630	Rtca	98	38.827	ENSECAG00000019831	RTCA	98	38.827	Equus_caballus
FBgn0025630	Rtca	92	36.628	ENSEEUG00000001165	RTCA	99	36.628	Erinaceus_europaeus
FBgn0025630	Rtca	98	39.496	ENSELUG00000003741	rtca	98	39.496	Esox_lucius
FBgn0025630	Rtca	99	38.398	ENSFCAG00000024460	RTCA	99	38.398	Felis_catus
FBgn0025630	Rtca	94	40.413	ENSFALG00000002443	RTCA	91	40.413	Ficedula_albicollis
FBgn0025630	Rtca	97	31.092	ENSFDAG00000016084	-	98	31.092	Fukomys_damarensis
FBgn0025630	Rtca	98	38.268	ENSFDAG00000012070	-	98	38.268	Fukomys_damarensis
FBgn0025630	Rtca	57	38.350	ENSFHEG00000002868	rtca	89	38.350	Fundulus_heteroclitus
FBgn0025630	Rtca	98	39.776	ENSGMOG00000013264	rtca	98	39.776	Gadus_morhua
FBgn0025630	Rtca	99	38.017	ENSGALG00000005277	RTCA	99	38.017	Gallus_gallus
FBgn0025630	Rtca	98	38.936	ENSGAFG00000011853	rtca	97	38.936	Gambusia_affinis
FBgn0025630	Rtca	99	40.110	ENSGACG00000013497	rtca	99	40.110	Gasterosteus_aculeatus
FBgn0025630	Rtca	81	37.755	ENSGAGG00000023306	RTCA	100	37.755	Gopherus_agassizii
FBgn0025630	Rtca	98	38.547	ENSGGOG00000009546	-	98	38.547	Gorilla_gorilla
FBgn0025630	Rtca	98	38.827	ENSGGOG00000044018	-	98	38.827	Gorilla_gorilla
FBgn0025630	Rtca	99	40.496	ENSHBUG00000002114	rtca	99	40.496	Haplochromis_burtoni
FBgn0025630	Rtca	98	38.547	ENSHGLG00000002617	RTCA	98	38.547	Heterocephalus_glaber_female
FBgn0025630	Rtca	98	38.547	ENSHGLG00100006056	RTCA	98	38.547	Heterocephalus_glaber_male
FBgn0025630	Rtca	98	40.563	ENSHCOG00000020628	rtca	87	40.563	Hippocampus_comes
FBgn0025630	Rtca	99	40.443	ENSIPUG00000024803	rtca	99	40.443	Ictalurus_punctatus
FBgn0025630	Rtca	99	34.254	ENSSTOG00000013528	-	99	34.254	Ictidomys_tridecemlineatus
FBgn0025630	Rtca	92	36.826	ENSSTOG00000033099	-	91	36.826	Ictidomys_tridecemlineatus
FBgn0025630	Rtca	98	30.726	ENSJJAG00000016178	Rtca	97	30.726	Jaculus_jaculus
FBgn0025630	Rtca	98	39.776	ENSKMAG00000006651	rtca	97	39.776	Kryptolebias_marmoratus
FBgn0025630	Rtca	86	37.539	ENSLBEG00000002448	-	98	37.539	Labrus_bergylta
FBgn0025630	Rtca	98	39.722	ENSLBEG00000028971	rtca	99	39.722	Labrus_bergylta
FBgn0025630	Rtca	99	37.673	ENSLACG00000013666	RTCA	99	37.673	Latimeria_chalumnae
FBgn0025630	Rtca	99	39.335	ENSLOCG00000000093	rtca	98	39.335	Lepisosteus_oculatus
FBgn0025630	Rtca	99	38.398	ENSLAFG00000001473	RTCA	99	38.398	Loxodonta_africana
FBgn0025630	Rtca	98	38.547	ENSMFAG00000034132	RTCA	98	38.547	Macaca_fascicularis
FBgn0025630	Rtca	98	38.547	ENSMMUG00000019105	RTCA	98	38.547	Macaca_mulatta
FBgn0025630	Rtca	83	34.641	ENSMNEG00000037163	RTCA	99	34.641	Macaca_nemestrina
FBgn0025630	Rtca	81	35.154	ENSMLEG00000042151	RTCA	87	35.154	Mandrillus_leucophaeus
FBgn0025630	Rtca	98	39.216	ENSMAMG00000016536	rtca	98	39.216	Mastacembelus_armatus
FBgn0025630	Rtca	99	40.496	ENSMZEG00005017945	rtca	99	40.496	Maylandia_zebra
FBgn0025630	Rtca	86	35.238	ENSMGAG00000006892	RTCA	99	35.238	Meleagris_gallopavo
FBgn0025630	Rtca	98	39.385	ENSMAUG00000008488	Rtca	98	39.385	Mesocricetus_auratus
FBgn0025630	Rtca	83	34.967	ENSMICG00000008643	RTCA	99	34.967	Microcebus_murinus
FBgn0025630	Rtca	98	38.827	ENSMOCG00000016660	Rtca	98	38.827	Microtus_ochrogaster
FBgn0025630	Rtca	83	37.049	ENSMMOG00000007750	rtca	99	37.049	Mola_mola
FBgn0025630	Rtca	99	39.779	ENSMODG00000003557	RTCA	99	39.779	Monodelphis_domestica
FBgn0025630	Rtca	98	39.216	ENSMALG00000020844	rtca	98	39.216	Monopterus_albus
FBgn0025630	Rtca	98	39.106	MGP_CAROLIEiJ_G0025565	Rtca	94	56.000	Mus_caroli
FBgn0025630	Rtca	98	39.106	ENSMUSG00000000339	Rtca	94	56.000	Mus_musculus
FBgn0025630	Rtca	98	39.106	MGP_PahariEiJ_G0027011	Rtca	94	56.000	Mus_pahari
FBgn0025630	Rtca	98	38.827	MGP_SPRETEiJ_G0026515	Rtca	94	56.000	Mus_spretus
FBgn0025630	Rtca	99	38.398	ENSMPUG00000012119	RTCA	99	38.398	Mustela_putorius_furo
FBgn0025630	Rtca	98	38.719	ENSMLUG00000009922	RTCA	98	38.719	Myotis_lucifugus
FBgn0025630	Rtca	99	39.011	ENSNGAG00000011540	Rtca	99	39.011	Nannospalax_galili
FBgn0025630	Rtca	99	39.945	ENSNBRG00000003062	rtca	99	39.945	Neolamprologus_brichardi
FBgn0025630	Rtca	98	38.547	ENSNLEG00000031426	RTCA	98	38.547	Nomascus_leucogenys
FBgn0025630	Rtca	72	33.083	ENSOPRG00000012092	RTCA	70	33.083	Ochotona_princeps
FBgn0025630	Rtca	94	37.500	ENSODEG00000006990	RTCA	96	37.931	Octodon_degus
FBgn0025630	Rtca	99	39.945	ENSONIG00000007753	rtca	99	39.945	Oreochromis_niloticus
FBgn0025630	Rtca	85	36.102	ENSOANG00000012055	RTCA	97	36.102	Ornithorhynchus_anatinus
FBgn0025630	Rtca	98	37.709	ENSOCUG00000014247	RTCA	98	37.709	Oryctolagus_cuniculus
FBgn0025630	Rtca	98	39.776	ENSORLG00000013605	rtca	98	39.776	Oryzias_latipes
FBgn0025630	Rtca	98	40.056	ENSORLG00020001904	rtca	98	40.056	Oryzias_latipes_hni
FBgn0025630	Rtca	98	40.056	ENSORLG00015021064	rtca	98	40.056	Oryzias_latipes_hsok
FBgn0025630	Rtca	99	39.945	ENSOMEG00000000756	rtca	99	39.945	Oryzias_melastigma
FBgn0025630	Rtca	99	36.740	ENSOGAG00000005627	RTCA	99	36.740	Otolemur_garnettii
FBgn0025630	Rtca	85	35.463	ENSOARG00000018122	RTCA	98	35.463	Ovis_aries
FBgn0025630	Rtca	98	37.466	ENSPPAG00000035119	RTCA	98	37.466	Pan_paniscus
FBgn0025630	Rtca	99	38.398	ENSPPRG00000000350	RTCA	99	38.398	Panthera_pardus
FBgn0025630	Rtca	99	38.398	ENSPTIG00000012816	RTCA	99	38.398	Panthera_tigris_altaica
FBgn0025630	Rtca	98	37.466	ENSPTRG00000001004	RTCA	98	37.466	Pan_troglodytes
FBgn0025630	Rtca	98	38.547	ENSPANG00000000346	RTCA	98	38.547	Papio_anubis
FBgn0025630	Rtca	99	40.443	ENSPKIG00000001653	rtca	99	40.443	Paramormyrops_kingsleyae
FBgn0025630	Rtca	99	39.945	ENSPSIG00000011408	RTCA	99	39.945	Pelodiscus_sinensis
FBgn0025630	Rtca	98	39.385	ENSPEMG00000018582	Rtca	98	39.385	Peromyscus_maniculatus_bairdii
FBgn0025630	Rtca	100	35.695	ENSPMAG00000009110	rtca	100	35.695	Petromyzon_marinus
FBgn0025630	Rtca	98	39.665	ENSPCIG00000007684	RTCA	98	39.665	Phascolarctos_cinereus
FBgn0025630	Rtca	98	39.385	ENSPFOG00000004824	rtca	98	39.385	Poecilia_formosa
FBgn0025630	Rtca	98	39.216	ENSPLAG00000011753	rtca	97	39.216	Poecilia_latipinna
FBgn0025630	Rtca	98	39.216	ENSPMEG00000020469	rtca	97	39.216	Poecilia_mexicana
FBgn0025630	Rtca	98	39.496	ENSPREG00000001365	rtca	97	39.496	Poecilia_reticulata
FBgn0025630	Rtca	98	38.547	ENSPPYG00000001115	RTCA	98	38.547	Pongo_abelii
FBgn0025630	Rtca	99	36.464	ENSPCAG00000005076	RTCA	99	36.464	Procavia_capensis
FBgn0025630	Rtca	99	38.398	ENSPCOG00000005603	RTCA	92	58.333	Propithecus_coquereli
FBgn0025630	Rtca	99	37.067	ENSPVAG00000009478	RTCA	99	37.067	Pteropus_vampyrus
FBgn0025630	Rtca	99	40.496	ENSPNYG00000004722	rtca	99	40.496	Pundamilia_nyererei
FBgn0025630	Rtca	99	39.889	ENSPNAG00000022270	rtca	99	39.889	Pygocentrus_nattereri
FBgn0025630	Rtca	98	38.547	ENSRNOG00000014575	Rtca	98	38.547	Rattus_norvegicus
FBgn0025630	Rtca	98	37.466	ENSRBIG00000041180	RTCA	98	37.466	Rhinopithecus_bieti
FBgn0025630	Rtca	98	38.547	ENSRROG00000024929	RTCA	98	38.547	Rhinopithecus_roxellana
FBgn0025630	Rtca	98	38.547	ENSSBOG00000028626	RTCA	98	38.547	Saimiri_boliviensis_boliviensis
FBgn0025630	Rtca	99	40.055	ENSSHAG00000001758	RTCA	99	40.055	Sarcophilus_harrisii
FBgn0025630	Rtca	97	39.326	ENSSMAG00000014680	rtca	96	39.326	Scophthalmus_maximus
FBgn0025630	Rtca	97	39.045	ENSSDUG00000015585	rtca	96	39.045	Seriola_dumerili
FBgn0025630	Rtca	95	38.329	ENSSLDG00000018985	rtca	94	38.329	Seriola_lalandi_dorsalis
FBgn0025630	Rtca	85	32.588	ENSSARG00000013993	RTCA	99	32.588	Sorex_araneus
FBgn0025630	Rtca	99	39.669	ENSSPAG00000011938	rtca	99	39.669	Stegastes_partitus
FBgn0025630	Rtca	98	38.827	ENSSSCG00000006865	RTCA	98	38.827	Sus_scrofa
FBgn0025630	Rtca	99	39.394	ENSTGUG00000005154	RTCA	99	39.394	Taeniopygia_guttata
FBgn0025630	Rtca	98	40.336	ENSTRUG00000008799	rtca	98	40.336	Takifugu_rubripes
FBgn0025630	Rtca	98	40.336	ENSTNIG00000004725	rtca	98	40.336	Tetraodon_nigroviridis
FBgn0025630	Rtca	98	37.736	ENSTTRG00000015327	RTCA	98	37.736	Tursiops_truncatus
FBgn0025630	Rtca	92	39.940	ENSUAMG00000017265	RTCA	94	39.940	Ursus_americanus
FBgn0025630	Rtca	99	38.398	ENSUMAG00000007881	RTCA	99	38.398	Ursus_maritimus
FBgn0025630	Rtca	85	32.268	ENSVPAG00000001039	RTCA	82	32.268	Vicugna_pacos
FBgn0025630	Rtca	99	38.398	ENSVVUG00000022041	RTCA	67	38.082	Vulpes_vulpes
FBgn0025630	Rtca	98	36.842	ENSXETG00000031661	RTCA	98	36.842	Xenopus_tropicalis
FBgn0025630	Rtca	98	36.134	ENSXCOG00000008002	rtca	98	36.134	Xiphophorus_couchianus
FBgn0025630	Rtca	98	39.216	ENSXMAG00000005482	rtca	97	39.216	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003963	RNA-3'-phosphate cyclase activity	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	25961792.	IDA	Component
GO:0006396	RNA processing	-	IEA	Process
GO:0048681	negative regulation of axon regeneration	25961792.	IMP	Process