EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0026015 (Gene tree)
Gene ID: 31565
Gene Symbol: Top3beta
Alias: -
Full Name: Topoisomerase 3beta
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 3853
Position: chrX: 6284138-6287990
Accession: FBgn0026015
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27378189	Global changes of the RNA bound proteome during the maternal-to-zygotic transition in Drosophila	IC & embryos.MZT	2016 Jul 5	Sysoev VO	DOI: 10.1038/ncomms12128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0340028	-	3296	-	FBpp0309042	875 (aa)	-	O96651
FBtr0070930	-	2963	-	FBpp0070891	875 (aa)	-	O96651

Gene Model

Click here to download FBgn0026015's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0026015's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0026015	Top3beta	100	56.349	ENSG00000100038	TOP3B	99	68.980	Homo_sapiens
FBgn0026015	Top3beta	100	56.576	ENSMUSG00000022779	Top3b	100	69.231	Mus_musculus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003677	DNA binding	-	IEA	Function
GO:0003916	DNA topoisomerase activity	21873635.	IBA	Function
GO:0003917	DNA topoisomerase type I activity	12023976.	IDA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0006265	DNA topological change	21873635.	IBA	Process
GO:0006265	DNA topological change	12023976.	IDA	Process
GO:0051965	positive regulation of synapse assembly	23912945.	IMP	Process