EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0026080 (Gene tree)
Gene ID: 31362
Gene Symbol: Tip60
Alias: -
Full Name: Tat interactive protein 60kDa
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Minus strand
Length: 2688 bases
Position: chrX:4114800-4117487
Accession: FBgn0026080
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0305387	Tudor-knot	PF11717.8	1.8e-19	1	1
FBpp0070636	Tudor-knot	PF11717.8	2.1e-19	1	1
FBpp0305388	Tudor-knot	PF11717.8	2.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0333186	-	1852	-	FBpp0305388	541 (aa)	-	Q960X4
FBtr0333185	-	2368	-	FBpp0305387	473 (aa)	-	A9YI74
FBtr0070668	-	2390	-	FBpp0070636	541 (aa)	-	Q960X4

Gene Model

Click here to download FBgn0026080's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0026080's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0026080	Tip60	97	58.088	ENSAPOG00000016436	kat5b	99	58.022	Acanthochromis_polyacanthus
FBgn0026080	Tip60	97	57.439	ENSACIG00000010425	kat5b	99	57.439	Amphilophus_citrinellus
FBgn0026080	Tip60	97	58.519	ENSAOCG00000014287	kat5b	99	58.519	Amphiprion_ocellaris
FBgn0026080	Tip60	97	57.428	ENSAPEG00000001944	kat5b	99	57.491	Amphiprion_percula
FBgn0026080	Tip60	97	57.757	ENSATEG00000016047	kat5b	98	56.937	Anabas_testudineus
FBgn0026080	Tip60	97	57.699	ENSACLG00000015105	kat5b	99	57.090	Astatotilapia_calliptera
FBgn0026080	Tip60	96	57.656	ENSAMXG00000009091	kat5b	99	57.656	Astyanax_mexicanus
FBgn0026080	Tip60	64	70.513	WBGene00007029	mys-1	82	64.935	Caenorhabditis_elegans
FBgn0026080	Tip60	96	53.160	ENSCSAVG00000004784	-	90	73.841	Ciona_savignyi
FBgn0026080	Tip60	93	78.138	ENSCSEG00000014541	kat5b	99	76.101	Cynoglossus_semilaevis
FBgn0026080	Tip60	77	76.972	ENSCVAG00000012685	kat5b	98	56.475	Cyprinodon_variegatus
FBgn0026080	Tip60	97	56.545	ENSDARG00000045951	kat5b	99	56.545	Danio_rerio
FBgn0026080	Tip60	97	58.011	ENSDARG00000004587	kat5b	99	58.101	Danio_rerio
FBgn0026080	Tip60	85	50.360	ENSEBUG00000001775	kat5b	98	51.313	Eptatretus_burgeri
FBgn0026080	Tip60	96	58.397	ENSELUG00000016941	kat5b	99	59.013	Esox_lucius
FBgn0026080	Tip60	97	55.594	ENSFHEG00000003516	kat5b	98	55.106	Fundulus_heteroclitus
FBgn0026080	Tip60	97	56.884	ENSGAFG00000004081	kat5b	99	58.661	Gambusia_affinis
FBgn0026080	Tip60	96	57.414	ENSGACG00000020408	kat5b	99	58.444	Gasterosteus_aculeatus
FBgn0026080	Tip60	97	57.278	ENSHBUG00000023213	kat5b	99	58.271	Haplochromis_burtoni
FBgn0026080	Tip60	97	57.699	ENSHCOG00000002064	kat5b	98	58.256	Hippocampus_comes
FBgn0026080	Tip60	96	57.088	ENSIPUG00000014489	kat5b	93	75.625	Ictalurus_punctatus
FBgn0026080	Tip60	97	56.106	ENSKMAG00000009020	kat5b	98	56.150	Kryptolebias_marmoratus
FBgn0026080	Tip60	92	78.000	ENSLBEG00000011107	-	92	76.324	Labrus_bergylta
FBgn0026080	Tip60	92	78.000	ENSLBEG00000024629	-	92	76.324	Labrus_bergylta
FBgn0026080	Tip60	96	58.667	ENSMAMG00000016643	kat5b	99	58.667	Mastacembelus_armatus
FBgn0026080	Tip60	97	54.138	ENSMZEG00005016654	kat5b	98	55.614	Maylandia_zebra
FBgn0026080	Tip60	96	56.333	ENSMMOG00000016639	kat5b	99	56.333	Mola_mola
FBgn0026080	Tip60	97	55.300	ENSMALG00000017235	kat5b	98	54.982	Monopterus_albus
FBgn0026080	Tip60	87	50.238	ENSODEG00000016524	-	92	49.403	Octodon_degus
FBgn0026080	Tip60	97	56.584	ENSONIG00000005359	kat5b	99	58.272	Oreochromis_niloticus
FBgn0026080	Tip60	77	76.341	ENSORLG00000007458	kat5b	99	53.162	Oryzias_latipes
FBgn0026080	Tip60	77	76.341	ENSORLG00020004495	kat5b	99	54.754	Oryzias_latipes_hni
FBgn0026080	Tip60	77	76.341	ENSORLG00015009730	kat5b	99	53.425	Oryzias_latipes_hsok
FBgn0026080	Tip60	97	57.678	ENSOMEG00000002350	kat5b	99	57.678	Oryzias_melastigma
FBgn0026080	Tip60	97	56.848	ENSPKIG00000019383	kat5b	99	56.618	Paramormyrops_kingsleyae
FBgn0026080	Tip60	96	57.249	ENSPMGG00000020103	kat5b	99	57.221	Periophthalmus_magnuspinnatus
FBgn0026080	Tip60	96	58.569	ENSPMAG00000008957	kat5b	99	58.083	Petromyzon_marinus
FBgn0026080	Tip60	97	58.704	ENSPFOG00000010293	kat5b	99	58.148	Poecilia_formosa
FBgn0026080	Tip60	97	57.246	ENSPLAG00000015158	kat5b	98	56.752	Poecilia_latipinna
FBgn0026080	Tip60	96	57.443	ENSPMEG00000008824	kat5b	92	76.324	Poecilia_mexicana
FBgn0026080	Tip60	97	55.634	ENSPREG00000022986	kat5b	98	55.142	Poecilia_reticulata
FBgn0026080	Tip60	97	56.538	ENSPNYG00000017128	kat5b	99	57.090	Pundamilia_nyererei
FBgn0026080	Tip60	97	57.728	ENSPNAG00000003741	-	99	57.519	Pygocentrus_nattereri
FBgn0026080	Tip60	97	57.491	ENSPNAG00000022600	-	99	57.411	Pygocentrus_nattereri
FBgn0026080	Tip60	93	58.366	ENSSHAG00000001928	-	99	58.366	Sarcophilus_harrisii
FBgn0026080	Tip60	96	58.550	ENSSFOG00015005779	kat5	99	58.364	Scleropages_formosus
FBgn0026080	Tip60	84	77.603	ENSSMAG00000013982	kat5b	97	58.004	Scophthalmus_maximus
FBgn0026080	Tip60	97	58.952	ENSSDUG00000010863	kat5b	98	56.752	Seriola_dumerili
FBgn0026080	Tip60	97	58.952	ENSSLDG00000018594	kat5b	93	59.041	Seriola_lalandi_dorsalis
FBgn0026080	Tip60	97	57.428	ENSSPAG00000016282	kat5b	85	76.636	Stegastes_partitus
FBgn0026080	Tip60	97	58.118	ENSTRUG00000016643	kat5b	99	56.727	Takifugu_rubripes
FBgn0026080	Tip60	96	57.532	ENSTNIG00000011743	kat5b	99	58.106	Tetraodon_nigroviridis
FBgn0026080	Tip60	95	56.084	ENSUMAG00000010712	-	98	56.530	Ursus_maritimus
FBgn0026080	Tip60	96	52.328	ENSXETG00000020586	kat5	99	49.648	Xenopus_tropicalis
FBgn0026080	Tip60	97	57.169	ENSXMAG00000005173	kat5b	85	76.012	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000123	histone acetyltransferase complex	21873635.	IBA	Component
GO:0000123	histone acetyltransferase complex	15528408.	IPI	Component
GO:0000790	nuclear chromatin	21873635.	IBA	Component
GO:0004402	histone acetyltransferase activity	21873635.	IBA	Function
GO:0004402	histone acetyltransferase activity	15528408.	IDA	Function
GO:0004402	histone acetyltransferase activity	21494552.	IMP	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	15528408.19949809.29654189.	IDA	Component
GO:0005705	polytene chromosome interband	19949809.	IDA	Component
GO:0007399	nervous system development	21494552.	IMP	Process
GO:0010468	regulation of gene expression	22848598.	IMP	Process
GO:0010485	H4 histone acetyltransferase activity	21873635.	IBA	Function
GO:0016573	histone acetylation	15528408.	IDA	Process
GO:0032777	Piccolo NuA4 histone acetyltransferase complex	21873635.	IBA	Component
GO:0035267	NuA4 histone acetyltransferase complex	15528408.	IDA	Component
GO:0042393	histone binding	21873635.	IBA	Function
GO:0043486	histone exchange	15528408.	IDA	Process
GO:0043524	negative regulation of neuron apoptotic process	22848598.	IMP	Process
GO:0043967	histone H4 acetylation	21494552.	IMP	Process
GO:0045892	negative regulation of transcription, DNA-templated	21873635.	IBA	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	21873635.	IBA	Process
GO:0048167	regulation of synaptic plasticity	22046262.	IDA	Process
GO:1990188	euchromatin binding	29654189.	IDA	Function
GO:2000331	regulation of terminal button organization	22046262.	IDA	Process