EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: FBgn0026373 (Gene tree)
Gene ID: 34796
Gene Symbol: RpII33
Alias: -
Full Name: RNA polymerase II 33kD subunit
Gene Type: protein_coding
Species: Drosophila_melanogaster
Status: putative
Strand: Plus strand
Length: 970 bases
Position: chr2L:13833337-13834306
Accession: FBgn0026373
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
FBpp0080121	RNA_pol_A_bac	PF01000.26	2.9e-38	1	1
FBpp0080121	RNA_pol_L	PF01193.24	3.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
FBtr0080544	-	970	-	FBpp0080121	275 (aa)	-	O97183

Gene Model

Click here to download FBgn0026373's gene model file

Protein-Protein Interaction (PPI)

Clik here to download FBgn0026373's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
FBgn0026373	RpII33	100	69.091	ENSG00000102978	POLR2C	100	71.739	Homo_sapiens
FBgn0026373	RpII33	100	68.364	ENSAPOG00000011708	polr2c	99	68.364	Acanthochromis_polyacanthus
FBgn0026373	RpII33	100	68.727	ENSAMEG00000017026	POLR2C	99	68.727	Ailuropoda_melanoleuca
FBgn0026373	RpII33	100	68.364	ENSACIG00000012060	polr2c	99	68.364	Amphilophus_citrinellus
FBgn0026373	RpII33	90	66.935	ENSAOCG00000018000	-	94	66.935	Amphiprion_ocellaris
FBgn0026373	RpII33	100	68.364	ENSAOCG00000010477	-	99	68.364	Amphiprion_ocellaris
FBgn0026373	RpII33	100	68.364	ENSAOCG00000015665	polr2c	99	68.364	Amphiprion_ocellaris
FBgn0026373	RpII33	100	68.364	ENSAPEG00000007221	polr2c	99	68.364	Amphiprion_percula
FBgn0026373	RpII33	100	67.273	ENSATEG00000007143	polr2c	99	67.273	Anabas_testudineus
FBgn0026373	RpII33	98	64.312	ENSAPLG00000005385	POLR2C	97	64.312	Anas_platyrhynchos
FBgn0026373	RpII33	78	57.209	ENSACAG00000011302	-	97	57.209	Anolis_carolinensis
FBgn0026373	RpII33	67	30.102	ENSACAG00000009764	POLR1C	54	30.102	Anolis_carolinensis
FBgn0026373	RpII33	100	68.364	ENSACAG00000007514	-	99	68.364	Anolis_carolinensis
FBgn0026373	RpII33	100	69.091	ENSANAG00000005302	POLR2C	99	69.091	Aotus_nancymaae
FBgn0026373	RpII33	100	68.000	ENSACLG00000004854	polr2c	99	68.000	Astatotilapia_calliptera
FBgn0026373	RpII33	100	66.909	ENSAMXG00000012805	polr2c	99	66.909	Astyanax_mexicanus
FBgn0026373	RpII33	100	68.727	ENSBTAG00000001856	POLR2C	99	68.727	Bos_taurus
FBgn0026373	RpII33	99	57.857	WBGene00007971	rpb-3	99	57.857	Caenorhabditis_elegans
FBgn0026373	RpII33	100	69.091	ENSCJAG00000012016	POLR2C	99	69.091	Callithrix_jacchus
FBgn0026373	RpII33	100	68.727	ENSCAFG00000008720	POLR2C	99	68.727	Canis_familiaris
FBgn0026373	RpII33	100	68.727	ENSCAFG00020007660	POLR2C	99	68.727	Canis_lupus_dingo
FBgn0026373	RpII33	100	68.727	ENSCHIG00000012072	POLR2C	99	68.727	Capra_hircus
FBgn0026373	RpII33	100	68.364	ENSTSYG00000011076	POLR2C	99	68.364	Carlito_syrichta
FBgn0026373	RpII33	69	66.316	ENSCAPG00000006608	POLR2C	81	66.316	Cavia_aperea
FBgn0026373	RpII33	100	68.727	ENSCPOG00000004554	POLR2C	99	68.727	Cavia_porcellus
FBgn0026373	RpII33	100	69.091	ENSCCAG00000035768	POLR2C	99	69.091	Cebus_capucinus
FBgn0026373	RpII33	100	69.091	ENSCATG00000040803	POLR2C	99	69.091	Cercocebus_atys
FBgn0026373	RpII33	100	68.727	ENSCLAG00000013676	POLR2C	99	68.727	Chinchilla_lanigera
FBgn0026373	RpII33	100	69.091	ENSCSAG00000004901	POLR2C	99	69.091	Chlorocebus_sabaeus
FBgn0026373	RpII33	100	63.636	ENSCHOG00000002986	POLR2C	99	63.636	Choloepus_hoffmanni
FBgn0026373	RpII33	89	67.886	ENSCPBG00000022758	POLR2C	92	67.886	Chrysemys_picta_bellii
FBgn0026373	RpII33	95	62.676	ENSCING00000021895	-	99	62.676	Ciona_intestinalis
FBgn0026373	RpII33	54	62.914	ENSCING00000009812	-	99	62.914	Ciona_intestinalis
FBgn0026373	RpII33	100	64.982	ENSCSAVG00000002167	-	99	64.982	Ciona_savignyi
FBgn0026373	RpII33	100	69.091	ENSCANG00000034876	POLR2C	99	69.091	Colobus_angolensis_palliatus
FBgn0026373	RpII33	100	68.364	ENSCGRG00001019477	Polr2c	99	68.364	Cricetulus_griseus_chok1gshd
FBgn0026373	RpII33	100	68.364	ENSCGRG00000013273	Polr2c	99	68.364	Cricetulus_griseus_crigri
FBgn0026373	RpII33	100	68.364	ENSCSEG00000001719	polr2c	99	68.364	Cynoglossus_semilaevis
FBgn0026373	RpII33	74	72.059	ENSCVAG00000017931	polr2c	82	72.059	Cyprinodon_variegatus
FBgn0026373	RpII33	100	68.364	ENSCVAG00000004718	-	99	68.364	Cyprinodon_variegatus
FBgn0026373	RpII33	100	66.909	ENSDARG00000033596	polr2c	99	66.909	Danio_rerio
FBgn0026373	RpII33	95	46.212	ENSDNOG00000036028	-	99	46.212	Dasypus_novemcinctus
FBgn0026373	RpII33	100	68.364	ENSDNOG00000030752	-	81	68.364	Dasypus_novemcinctus
FBgn0026373	RpII33	100	68.727	ENSDORG00000000081	Polr2c	99	68.727	Dipodomys_ordii
FBgn0026373	RpII33	100	57.455	ENSETEG00000004185	POLR2C	99	57.455	Echinops_telfairi
FBgn0026373	RpII33	100	62.545	ENSEBUG00000016262	polr2c	99	62.545	Eptatretus_burgeri
FBgn0026373	RpII33	100	68.364	ENSEASG00005005406	POLR2C	99	68.364	Equus_asinus_asinus
FBgn0026373	RpII33	100	68.727	ENSECAG00000015818	POLR2C	99	68.727	Equus_caballus
FBgn0026373	RpII33	100	57.455	ENSEEUG00000003658	POLR2C	99	57.455	Erinaceus_europaeus
FBgn0026373	RpII33	100	66.182	ENSELUG00000012259	polr2c	99	66.182	Esox_lucius
FBgn0026373	RpII33	100	68.727	ENSFCAG00000034622	POLR2C	99	68.727	Felis_catus
FBgn0026373	RpII33	100	68.000	ENSFALG00000006931	POLR2C	99	68.000	Ficedula_albicollis
FBgn0026373	RpII33	100	67.273	ENSFDAG00000008641	POLR2C	99	67.273	Fukomys_damarensis
FBgn0026373	RpII33	100	68.364	ENSFHEG00000020739	polr2c	99	68.364	Fundulus_heteroclitus
FBgn0026373	RpII33	100	66.909	ENSGMOG00000004203	polr2c	99	66.909	Gadus_morhua
FBgn0026373	RpII33	100	68.000	ENSGALG00000001168	POLR2C	99	68.000	Gallus_gallus
FBgn0026373	RpII33	100	68.364	ENSGAFG00000021951	polr2c	99	68.364	Gambusia_affinis
FBgn0026373	RpII33	100	66.545	ENSGACG00000002194	polr2c	99	66.545	Gasterosteus_aculeatus
FBgn0026373	RpII33	89	67.886	ENSGAGG00000016942	POLR2C	87	67.886	Gopherus_agassizii
FBgn0026373	RpII33	100	69.091	ENSGGOG00000012415	POLR2C	99	69.091	Gorilla_gorilla
FBgn0026373	RpII33	100	68.000	ENSHBUG00000023040	polr2c	99	68.000	Haplochromis_burtoni
FBgn0026373	RpII33	100	68.727	ENSHGLG00000013465	POLR2C	99	68.727	Heterocephalus_glaber_female
FBgn0026373	RpII33	100	68.727	ENSHGLG00100011949	POLR2C	99	68.727	Heterocephalus_glaber_male
FBgn0026373	RpII33	100	66.909	ENSHCOG00000007066	polr2c	99	66.909	Hippocampus_comes
FBgn0026373	RpII33	100	68.000	ENSIPUG00000009231	polr2c	99	68.000	Ictalurus_punctatus
FBgn0026373	RpII33	100	58.545	ENSSTOG00000031354	-	99	58.545	Ictidomys_tridecemlineatus
FBgn0026373	RpII33	100	68.727	ENSSTOG00000015150	-	99	68.727	Ictidomys_tridecemlineatus
FBgn0026373	RpII33	100	68.364	ENSJJAG00000023057	Polr2c	99	68.364	Jaculus_jaculus
FBgn0026373	RpII33	100	68.364	ENSKMAG00000016196	polr2c	99	68.364	Kryptolebias_marmoratus
FBgn0026373	RpII33	100	68.000	ENSLBEG00000007369	polr2c	99	68.000	Labrus_bergylta
FBgn0026373	RpII33	100	55.590	ENSLACG00000003703	POLR2C	99	55.590	Latimeria_chalumnae
FBgn0026373	RpII33	100	67.273	ENSLOCG00000003215	polr2c	99	67.273	Lepisosteus_oculatus
FBgn0026373	RpII33	100	68.727	ENSLAFG00000027230	POLR2C	99	68.727	Loxodonta_africana
FBgn0026373	RpII33	100	69.091	ENSMFAG00000016861	POLR2C	99	69.091	Macaca_fascicularis
FBgn0026373	RpII33	100	69.091	ENSMMUG00000020474	POLR2C	99	69.091	Macaca_mulatta
FBgn0026373	RpII33	100	69.091	ENSMNEG00000033565	POLR2C	99	69.091	Macaca_nemestrina
FBgn0026373	RpII33	100	69.091	ENSMLEG00000032412	POLR2C	99	69.091	Mandrillus_leucophaeus
FBgn0026373	RpII33	100	68.000	ENSMAMG00000013205	polr2c	99	68.000	Mastacembelus_armatus
FBgn0026373	RpII33	100	68.000	ENSMZEG00005015329	polr2c	99	68.000	Maylandia_zebra
FBgn0026373	RpII33	100	60.000	ENSMAUG00000000779	-	99	60.000	Mesocricetus_auratus
FBgn0026373	RpII33	97	58.801	ENSMAUG00000019031	-	99	58.801	Mesocricetus_auratus
FBgn0026373	RpII33	100	69.455	ENSMICG00000045178	POLR2C	99	69.455	Microcebus_murinus
FBgn0026373	RpII33	100	67.636	ENSMOCG00000013652	Polr2c	99	67.636	Microtus_ochrogaster
FBgn0026373	RpII33	100	66.909	ENSMMOG00000010560	polr2c	99	66.909	Mola_mola
FBgn0026373	RpII33	100	67.273	ENSMODG00000013540	POLR2C	99	67.273	Monodelphis_domestica
FBgn0026373	RpII33	100	68.000	ENSMALG00000004581	polr2c	99	68.000	Monopterus_albus
FBgn0026373	RpII33	100	68.364	MGP_CAROLIEiJ_G0031409	Polr2c	99	68.364	Mus_caroli
FBgn0026373	RpII33	56	30.233	MGP_CAROLIEiJ_G0021662	Polr1c	51	30.233	Mus_caroli
FBgn0026373	RpII33	66	30.000	ENSMUSG00000067148	Polr1c	54	30.000	Mus_musculus
FBgn0026373	RpII33	100	68.364	ENSMUSG00000031783	Polr2c	99	68.364	Mus_musculus
FBgn0026373	RpII33	100	68.364	MGP_PahariEiJ_G0023007	Polr2c	99	68.364	Mus_pahari
FBgn0026373	RpII33	100	68.364	MGP_SPRETEiJ_G0032528	Polr2c	99	68.364	Mus_spretus
FBgn0026373	RpII33	100	68.727	ENSMPUG00000004483	POLR2C	99	68.727	Mustela_putorius_furo
FBgn0026373	RpII33	71	64.948	ENSMLUG00000023530	-	99	64.948	Myotis_lucifugus
FBgn0026373	RpII33	100	68.364	ENSMLUG00000025422	-	99	68.364	Myotis_lucifugus
FBgn0026373	RpII33	100	68.364	ENSMLUG00000015833	-	99	68.364	Myotis_lucifugus
FBgn0026373	RpII33	100	66.545	ENSMLUG00000029495	-	99	66.545	Myotis_lucifugus
FBgn0026373	RpII33	100	68.727	ENSNGAG00000012249	-	99	68.727	Nannospalax_galili
FBgn0026373	RpII33	67	30.653	ENSNGAG00000023487	Polr1c	55	30.653	Nannospalax_galili
FBgn0026373	RpII33	100	51.273	ENSNGAG00000010540	-	99	51.273	Nannospalax_galili
FBgn0026373	RpII33	78	69.173	ENSNBRG00000003952	polr2c	99	69.173	Neolamprologus_brichardi
FBgn0026373	RpII33	100	58.182	ENSNLEG00000003034	POLR2C	99	58.182	Nomascus_leucogenys
FBgn0026373	RpII33	100	62.545	ENSMEUG00000014741	POLR2C	99	62.545	Notamacropus_eugenii
FBgn0026373	RpII33	100	64.727	ENSOPRG00000006979	POLR2C	99	64.727	Ochotona_princeps
FBgn0026373	RpII33	100	68.727	ENSODEG00000016934	POLR2C	99	68.727	Octodon_degus
FBgn0026373	RpII33	100	68.000	ENSONIG00000010914	polr2c	99	68.000	Oreochromis_niloticus
FBgn0026373	RpII33	84	66.522	ENSOANG00000009337	POLR2C	99	66.522	Ornithorhynchus_anatinus
FBgn0026373	RpII33	100	68.364	ENSOCUG00000014984	POLR2C	99	68.364	Oryctolagus_cuniculus
FBgn0026373	RpII33	100	67.273	ENSORLG00000015108	polr2c	99	67.273	Oryzias_latipes
FBgn0026373	RpII33	100	67.636	ENSORLG00020013566	polr2c	99	67.636	Oryzias_latipes_hni
FBgn0026373	RpII33	100	67.273	ENSORLG00015003751	polr2c	99	67.273	Oryzias_latipes_hsok
FBgn0026373	RpII33	100	68.000	ENSOMEG00000019444	polr2c	99	68.000	Oryzias_melastigma
FBgn0026373	RpII33	99	37.956	ENSOGAG00000029610	-	99	37.956	Otolemur_garnettii
FBgn0026373	RpII33	100	68.727	ENSOGAG00000016866	POLR2C	99	68.727	Otolemur_garnettii
FBgn0026373	RpII33	100	68.727	ENSOARG00000000302	POLR2C	99	68.727	Ovis_aries
FBgn0026373	RpII33	100	65.455	ENSPPAG00000042822	POLR2C	99	65.455	Pan_paniscus
FBgn0026373	RpII33	100	68.727	ENSPPRG00000003215	POLR2C	99	68.727	Panthera_pardus
FBgn0026373	RpII33	97	65.038	ENSPTIG00000010297	POLR2C	96	65.038	Panthera_tigris_altaica
FBgn0026373	RpII33	100	69.091	ENSPTRG00000008157	POLR2C	99	69.091	Pan_troglodytes
FBgn0026373	RpII33	100	69.091	ENSPANG00000006264	POLR2C	99	69.091	Papio_anubis
FBgn0026373	RpII33	100	67.273	ENSPKIG00000005228	polr2c	99	67.273	Paramormyrops_kingsleyae
FBgn0026373	RpII33	89	67.886	ENSPSIG00000016112	POLR2C	90	67.886	Pelodiscus_sinensis
FBgn0026373	RpII33	75	70.388	ENSPMGG00000021249	polr2c	84	70.388	Periophthalmus_magnuspinnatus
FBgn0026373	RpII33	100	68.364	ENSPEMG00000014204	Polr2c	99	68.364	Peromyscus_maniculatus_bairdii
FBgn0026373	RpII33	83	68.996	ENSPMAG00000004827	polr2c	100	68.996	Petromyzon_marinus
FBgn0026373	RpII33	100	67.636	ENSPCIG00000015111	POLR2C	99	67.636	Phascolarctos_cinereus
FBgn0026373	RpII33	100	68.364	ENSPFOG00000024666	polr2c	99	68.364	Poecilia_formosa
FBgn0026373	RpII33	100	68.364	ENSPLAG00000019750	polr2c	99	68.364	Poecilia_latipinna
FBgn0026373	RpII33	100	68.364	ENSPMEG00000001741	polr2c	99	68.364	Poecilia_mexicana
FBgn0026373	RpII33	100	64.029	ENSPREG00000003090	polr2c	99	64.029	Poecilia_reticulata
FBgn0026373	RpII33	100	69.091	ENSPPYG00000007390	POLR2C	99	69.091	Pongo_abelii
FBgn0026373	RpII33	83	67.686	ENSPCAG00000002423	POLR2C	99	67.686	Procavia_capensis
FBgn0026373	RpII33	100	69.455	ENSPCOG00000017282	POLR2C	99	69.455	Propithecus_coquereli
FBgn0026373	RpII33	100	68.727	ENSPVAG00000001399	POLR2C	99	68.727	Pteropus_vampyrus
FBgn0026373	RpII33	100	68.000	ENSPNYG00000003756	polr2c	99	68.000	Pundamilia_nyererei
FBgn0026373	RpII33	100	68.727	ENSPNAG00000012133	polr2c	99	68.727	Pygocentrus_nattereri
FBgn0026373	RpII33	100	68.364	ENSRNOG00000015720	Polr2c	99	68.364	Rattus_norvegicus
FBgn0026373	RpII33	100	69.091	ENSRBIG00000026549	POLR2C	99	69.091	Rhinopithecus_bieti
FBgn0026373	RpII33	100	69.091	ENSRROG00000045745	POLR2C	99	69.091	Rhinopithecus_roxellana
FBgn0026373	RpII33	96	46.840	YIL021W	RPB3	83	46.840	Saccharomyces_cerevisiae
FBgn0026373	RpII33	100	69.091	ENSSBOG00000030004	POLR2C	99	69.091	Saimiri_boliviensis_boliviensis
FBgn0026373	RpII33	100	68.000	ENSSFOG00015023460	polr2c	99	68.000	Scleropages_formosus
FBgn0026373	RpII33	100	68.364	ENSSMAG00000002827	polr2c	81	68.364	Scophthalmus_maximus
FBgn0026373	RpII33	100	68.000	ENSSDUG00000003354	polr2c	99	68.000	Seriola_dumerili
FBgn0026373	RpII33	100	68.000	ENSSLDG00000003555	polr2c	99	68.000	Seriola_lalandi_dorsalis
FBgn0026373	RpII33	57	51.592	ENSSARG00000001565	-	100	51.592	Sorex_araneus
FBgn0026373	RpII33	100	68.364	ENSSPUG00000012934	POLR2C	99	68.364	Sphenodon_punctatus
FBgn0026373	RpII33	100	68.364	ENSSPAG00000005108	polr2c	99	68.364	Stegastes_partitus
FBgn0026373	RpII33	100	68.364	ENSSSCG00000025454	POLR2C	99	68.364	Sus_scrofa
FBgn0026373	RpII33	100	68.000	ENSTGUG00000004996	POLR2C	99	68.000	Taeniopygia_guttata
FBgn0026373	RpII33	100	68.364	ENSTRUG00000004676	polr2c	99	68.364	Takifugu_rubripes
FBgn0026373	RpII33	100	68.727	ENSTNIG00000008851	polr2c	99	68.727	Tetraodon_nigroviridis
FBgn0026373	RpII33	100	68.000	ENSTBEG00000009442	POLR2C	99	68.000	Tupaia_belangeri
FBgn0026373	RpII33	83	67.249	ENSTTRG00000010060	POLR2C	99	67.249	Tursiops_truncatus
FBgn0026373	RpII33	100	68.727	ENSUAMG00000014170	POLR2C	99	68.727	Ursus_americanus
FBgn0026373	RpII33	91	67.600	ENSUMAG00000021686	POLR2C	96	67.600	Ursus_maritimus
FBgn0026373	RpII33	67	64.324	ENSVPAG00000007590	POLR2C	100	64.324	Vicugna_pacos
FBgn0026373	RpII33	100	65.818	ENSVVUG00000023516	-	99	65.818	Vulpes_vulpes
FBgn0026373	RpII33	52	68.750	ENSVVUG00000003058	-	93	68.750	Vulpes_vulpes
FBgn0026373	RpII33	100	60.145	ENSXETG00000013784	polr2c	99	60.145	Xenopus_tropicalis
FBgn0026373	RpII33	100	68.364	ENSXCOG00000020734	polr2c	99	68.364	Xiphophorus_couchianus
FBgn0026373	RpII33	100	68.364	ENSXMAG00000015984	polr2c	99	68.364	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001055	RNA polymerase II activity	21873635.	IBA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	10908585.	ISS	Function
GO:0005634	nucleus	18158896.	IDA	Component
GO:0005665	RNA polymerase II, core complex	21873635.	IBA	Component
GO:0005665	RNA polymerase II, core complex	18158896.	IDA	Component
GO:0005665	RNA polymerase II, core complex	10908585.	ISS	Component
GO:0005700	polytene chromosome	19921261.	IDA	Component
GO:0005703	polytene chromosome puff	18158896.	IDA	Component
GO:0005737	cytoplasm	18158896.	IDA	Component
GO:0006366	transcription by RNA polymerase II	10908585.	ISS	Process
GO:0034605	cellular response to heat	18158896.	IEP	Process
GO:0046983	protein dimerization activity	-	IEA	Function